Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010445g0010 Nicotiana tabacum HOM05D000069 ORTHO05D001405 4.1e-29 130.6 60 100.0
Nitab4.5_0008227g0020 Nicotiana tabacum HOM05D000069 ORTHO05D001405 2.8e-09 64.7 33 87.9
PGSC0003DMG400031066 Solanum tuberosum HOM05D000069 ORTHO05D001405 3.6e-09 64.3 33 87.9
AL5G36050 Arabidopsis lyrata HOM05D000069 ORTHO05D001405 4.7e-09 63.9 57 56.1
CAN.G321.51 Capsicum annuum HOM05D000069 ORTHO05D001405 6.2e-09 63.5 33 84.8
Solyc11g008260.2 Solanum lycopersicum HOM05D000069 ORTHO05D001405 8.1e-09 63.2 33 84.8
Sopen11g004070 Solanum pennellii HOM05D000069 ORTHO05D001405 8.1e-09 63.2 33 84.8
Peaxi162Scf00145g00109 Petunia axillaris HOM05D000069 ORTHO05D001405 1.4e-08 62.4 33 81.8
CARHR164920 Cardamine hirsuta HOM05D000069 ORTHO05D001405 1.8e-08 62.0 33 75.8
THA.LOC104809980 Tarenaya hassleriana HOM05D000069 ORTHO05D001405 1.8e-08 62.0 33 78.8
A09p47930 Brassica napus HOM05D000069 ORTHO05D001405 2.3e-08 61.6 33 78.8
BraA09t40248Z Brassica rapa HOM05D000069 ORTHO05D001405 2.3e-08 61.6 33 78.8
Nitab4.5_0001450g0200 Nicotiana tabacum HOM05D000069 ORTHO05D001405 2.3e-08 61.6 33 81.8
Thecc.10G086000 Theobroma cacao HOM05D000069 ORTHO05D001405 2.3e-08 61.6 33 78.8
ClCG05G021240 Citrullus lanatus HOM05D000069 ORTHO05D001405 3.1e-08 61.2 33 78.8
MELO3C012403.2 Cucumis melo HOM05D000069 ORTHO05D001405 3.1e-08 61.2 33 78.8
CsaV3_5G036030 Cucumis sativus L. HOM05D000069 ORTHO05D001405 3.1e-08 61.2 33 78.8
Ca_10535_v3 Cicer arietinum L. HOM05D000069 ORTHO05D001405 4.0e-08 60.8 32 78.1
TPR.G10296 Trifolium pratense HOM05D000069 ORTHO05D001405 4.0e-08 60.8 32 81.2
C08p30170 Brassica napus HOM05D000069 ORTHO05D001405 5.2e-08 60.5 33 75.8
BolC8t50623H Brassica oleracea HOM05D000069 ORTHO05D001405 5.2e-08 60.5 33 75.8
Carub.0005s2155 Capsella rubella HOM05D000069 ORTHO05D001405 5.2e-08 60.5 33 75.8
Cpa.g.sc53.142 Carica papaya HOM05D000069 ORTHO05D001405 5.2e-08 60.5 33 78.8
Lj5g0020661 Lotus japonicus HOM05D000069 ORTHO05D001405 5.2e-08 60.5 32 81.2
Oeu010014.1 Olea europaea HOM05D000069 ORTHO05D001405 5.2e-08 60.5 33 75.8
Aa31sc43G30 Aethionema arabicum HOM05D000069 ORTHO05D001405 6.8e-08 60.1 33 75.8
AT3G54940 Arabidopsis thaliana HOM05D000069 ORTHO05D001405 6.8e-08 60.1 33 75.8
Thhalv10010475m.g Eutrema salsugineum HOM05D000069 ORTHO05D001405 6.8e-08 60.1 33 78.8
FAN06G4518 Fragaria x ananassa HOM05D000069 ORTHO05D001405 8.9e-08 59.7 33 75.8
MD07G1169100 Malus domestica HOM05D000069 ORTHO05D001405 8.9e-08 59.7 33 75.8
SalBow4G1595 Salvia bowleyana HOM05D000069 ORTHO05D001405 8.9e-08 59.7 52 59.6
Actinidia38874 Actinidia chinensis HOM05D000069 ORTHO05D001405 1.2e-07 59.3 51 56.9
Sp5g07480 Schrenkiella parvula HOM05D000069 ORTHO05D001405 1.2e-07 59.3 33 72.7
COL.COLO4_36541 Corchorus olitorius HOM05D000069 ORTHO05D001405 1.5e-07 58.9 33 75.8
Migut.F01949 Erythranthe guttata HOM05D000069 ORTHO05D001405 2.0e-07 58.5 33 75.8
Sed0002419 Sechium edule HOM05D000069 ORTHO05D001405 2.0e-07 58.5 33 75.8
Cc02_g10820 Coffea canephora HOM05D000069 ORTHO05D001405 2.6e-07 58.2 31 77.4
Glyma.10G207100 Glycine max HOM05D000069 ORTHO05D001405 2.6e-07 58.2 33 69.7
Medtr1g094135 Medicago truncatula HOM05D000069 ORTHO05D001405 2.6e-07 58.2 32 78.1
PGR044G0244 Punica granatum HOM05D000069 ORTHO05D001405 2.6e-07 58.2 33 72.7
SalBow4G2585 Salvia bowleyana HOM05D000069 ORTHO05D001405 2.6e-07 58.2 33 78.8
FvH4_7g18581 Fragaria vesca HOM05D000069 ORTHO05D001405 3.4e-07 57.8 47 57.4
Glyma.20G183732 Glycine max HOM05D000069 ORTHO05D001405 3.4e-07 57.8 33 72.7
Gohir.D10G210100 Gossypium hirsutum HOM05D000069 ORTHO05D001405 3.4e-07 57.8 33 72.7
Gorai.011G235500 Gossypium raimondii HOM05D000069 ORTHO05D001405 3.4e-07 57.8 33 72.7
Prupe.2G207100 Prunus persica HOM05D000069 ORTHO05D001405 3.4e-07 57.8 33 72.7
CANSAT56G3389 Cannabis sativa HOM05D000069 ORTHO05D001405 4.4e-07 57.4 32 75.0
FAN03G0998 Fragaria x ananassa HOM05D000069 ORTHO05D001405 4.4e-07 57.4 33 72.7
FAN06G2379 Fragaria x ananassa HOM05D000069 ORTHO05D001405 4.4e-07 57.4 33 72.7
Potri.010G228400 Populus trichocarpa HOM05D000069 ORTHO05D001405 4.4e-07 57.4 33 72.7
Sabra10G0177100 Salix brachista HOM05D000069 ORTHO05D001405 4.4e-07 57.4 33 72.7
HPP92_005029 Vanilla planifolia HOM05D000069 ORTHO05D001405 4.4e-07 57.4 32 75.0
Lsat_1_v5_gn_8_18720 Lactuca sativa HOM05D000069 ORTHO05D001405 5.8e-07 57.0 33 75.8
Hund26354 Selenicereus undatus HOM05D000185 ORTHO05D000105 5.8e-07 57.0 33 75.8
Atru.chr12.870 Acer truncatum HOM05D000069 ORTHO05D001405 7.6e-07 56.6 32 75.0
DCAR_019063 Daucus carota HOM05D000069 ORTHO05D001405 7.6e-07 56.6 31 74.2
Psat6g180640 Pisum sativum HOM05D000069 ORTHO05D001405 7.6e-07 56.6 31 74.2
SGA_v2.0_scaffold68G22827 Striga asiatica HOM05D000069 ORTHO05D001405 7.6e-07 56.6 31 74.2
TAR633G1788 Trochodendron aralioides HOM05D000069 ORTHO05D001405 7.6e-07 56.6 33 69.7
Ciclev10031865m.g Citrus clementina HOM05D000069 ORTHO05D001405 9.9e-07 56.2 33 69.7
Manes.10G050900 Manihot esculenta HOM05D000069 ORTHO05D001405 9.9e-07 56.2 33 66.7
PSO339G6403 Papaver somniferum HOM05D000069 ORTHO05D001405 9.9e-07 56.2 33 66.7
Phvul.007G099600 Phaseolus vulgaris HOM05D000069 ORTHO05D001405 9.9e-07 56.2 32 71.9
CiPaw.01G267800 Carya illinoinensis HOM05D000069 ORTHO05D001405 1.3e-06 55.8 33 66.7
FvH4_7g18550 Fragaria vesca HOM05D000069 ORTHO05D001405 1.3e-06 55.8 33 69.7
vmacro04831 Vaccinium macrocarpon HOM05D000069 ORTHO05D001405 1.3e-06 55.8 34 70.6
vmacro10248 Vaccinium macrocarpon HOM05D000069 ORTHO05D001405 1.3e-06 55.8 34 70.6
Cfa001803 Carpinus fangiana HOM05D000069 ORTHO05D001405 1.7e-06 55.5 33 66.7
Haze_16747 Corylus avellana HOM05D000069 ORTHO05D001405 1.7e-06 55.5 33 66.7
Gohir.A10G201800 Gossypium hirsutum HOM05D000069 ORTHO05D001405 1.7e-06 55.5 33 69.7
Hma1.2p1_0145F.1_g065280 Hydrangea macrophylla HOM05D000069 ORTHO05D001405 1.7e-06 55.5 33 69.7
Nn2g13829 Nelumbo nucifera HOM05D000069 ORTHO05D001405 1.7e-06 55.5 33 66.7
Rhsim09G0147100 Rhododendron simsii HOM05D000069 ORTHO05D001405 1.7e-06 55.5 33 72.7
RcHm_v2.0_Chr1g0362341 Rosa chinensis HOM05D000069 ORTHO05D001405 1.7e-06 55.5 33 69.7
ECA233G1755 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.2e-06 55.1 33 69.7
PSO063G2424 Papaver somniferum HOM05D000069 ORTHO05D001405 2.9e-06 54.7 33 66.7
VMungo0720G2150 Vigna mungo HOM05D000069 ORTHO05D001405 3.7e-06 54.3 32 68.8
Aqoxy1G01131 Aquilegia oxysepala HOM05D000069 ORTHO05D001405 6.4e-06 53.5 31 67.7
Eucgr.J01054 Eucalyptus grandis HOM05D000069 ORTHO05D001405 6.4e-06 53.5 33 69.7
TWI38G0041 Tripterygium wilfordii HOM05D000069 ORTHO05D001405 6.4e-06 53.5 33 60.6
ATR0661G560 Amborella trichopoda HOM05D000069 ORTHO05D001405 8.4e-06 53.1 31 67.7
Lj3A938T43 Lonicera japonica HOM05D000069 ORTHO05D001405 8.4e-06 53.1 31 71.0
Mapoly0122s0009 Marchantia polymorpha HOM05D000069 ORTHO05D001405 8.4e-06 53.1 31 71.0


User provided reference genes

Program Settings