Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010416g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 6.0e-185 650.6 305 100.0
PGSC0003DMG400030753 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.5e-116 422.2 394 53.3
Peaxi162Scf00033g00031 Petunia axillaris HOM05D000007 ORTHO05D000039 3.6e-113 412.1 395 53.9
Peaxi162Scf00037g00084 Petunia axillaris HOM05D000007 ORTHO05D000039 5.7e-111 404.8 395 53.2
Sopen06g019890 Solanum pennellii HOM05D000007 ORTHO05D000039 5.4e-101 371.7 394 48.5
Peaxi162Scf00033g00214 Petunia axillaris HOM05D000007 ORTHO05D000039 1.9e-98 363.2 332 52.7
Nitab4.5_0001821g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 8.9e-96 354.4 304 61.5
Peaxi162Scf01439g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 8.9e-96 354.4 398 45.5
Peaxi162Scf00033g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 2.7e-92 342.8 401 44.4
Nitab4.5_0006722g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.0e-91 339.3 305 52.5
PGSC0003DMG400045617 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.4e-87 325.9 400 42.8
Nitab4.5_0001530g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 6.4e-86 321.6 314 50.3
Solyc06g059820.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 5.1e-83 312.0 230 59.6
Nitab4.5_0013238g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 8.6e-83 311.2 335 46.9
PGSC0003DMG400030752 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.3e-82 309.3 402 41.8
Sopen06g019900 Solanum pennellii HOM05D000007 ORTHO05D000039 5.6e-82 308.5 393 41.0
PGSC0003DMG400013031 Solanum tuberosum HOM05D000007 ORTHO05D000039 7.6e-79 298.1 400 40.0
Solyc06g059810.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 2.4e-77 293.1 391 41.2
CAN.G319.8 Capsicum annuum HOM05D000007 ORTHO05D000039 4.8e-65 252.3 398 37.4
Peaxi162Scf00033g00025 Petunia axillaris HOM05D000007 ORTHO05D000039 6.4e-62 241.9 176 61.9
Sopen04g026320 Solanum pennellii HOM05D000007 ORTHO05D000039 4.0e-56 222.6 384 34.6
CAN.G46.3 Capsicum annuum HOM05D000007 ORTHO05D000039 1.9e-53 213.8 321 37.7
Sopen04g026360 Solanum pennellii HOM05D000007 ORTHO05D000039 1.3e-51 207.6 386 33.7
PGSC0003DMG400024836 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.8e-51 207.2 233 45.5
Sopen04g026370 Solanum pennellii HOM05D000007 ORTHO05D000039 2.3e-51 206.8 386 34.2
PGSC0003DMG400024834 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.7e-51 205.3 233 43.8
PGSC0003DMG400024825 Solanum tuberosum HOM05D000007 ORTHO05D000039 7.4e-50 201.8 373 33.5
Sopen00g010140 Solanum pennellii HOM05D000007 ORTHO05D000039 1.6e-49 200.7 386 32.6
Solyc04g063440.3 Solanum lycopersicum HOM05D000007 ORTHO05D000039 3.7e-49 199.5 386 32.9
Solyc04g064440.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 6.3e-49 198.7 386 31.9
PGSC0003DMG400024829 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.1e-48 198.0 223 45.3
Nitab4.5_0001530g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.4e-48 197.6 259 44.0
Solyc04g063415.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.4e-48 197.6 364 33.8
Nitab4.5_0008120g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.2e-47 194.5 231 43.7
PGSC0003DMG400024833 Solanum tuberosum HOM05D000007 ORTHO05D000039 7.6e-47 191.8 375 32.8
Nitab4.5_0000174g0080 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.0e-46 189.1 231 43.3
Sopen04g026420 Solanum pennellii HOM05D000007 ORTHO05D000039 5.0e-46 189.1 218 43.1
Nitab4.5_0001530g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.7e-41 174.1 241 40.7
Peaxi162Scf00066g01632 Petunia axillaris HOM05D000007 ORTHO05D000039 2.6e-39 166.8 285 36.5
Sopen04g026380 Solanum pennellii HOM05D000007 ORTHO05D000039 2.4e-32 143.7 330 31.2
Solyc04g064450.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.2e-31 141.4 163 43.6
Sopen04g026400 Solanum pennellii HOM05D000007 ORTHO05D000039 9.4e-29 131.7 223 37.2
Solyc04g063400.3 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.2e-28 131.3 145 44.8
PGSC0003DMG400037627 Solanum tuberosum HOM05D000007 ORTHO05D000039 4.7e-28 129.4 234 36.3
CAN.G319.6 Capsicum annuum HOM05D000007 ORTHO05D000039 1.0e-27 128.3 220 37.7
SalBow1G6928 Salvia bowleyana HOM05D000007 ORTHO05D000039 1.4e-27 127.9 310 29.7
PGSC0003DMG400039355 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.1e-26 124.8 228 36.8
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 5.3e-24 115.9 219 35.6
Lj7C597G11 Lonicera japonica HOM05D000007 ORTHO05D000039 1.2e-23 114.8 218 31.2
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 3.5e-23 113.2 219 34.2
PGSC0003DMG400024831 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.5e-23 113.2 170 40.0
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 7.7e-23 112.1 220 34.1
MSTRG.3214 Avicennia marina HOM05D000007 ORTHO05D000039 1.7e-22 110.9 235 31.5
Dinv34983 Davidia involucrata HOM05D000007 ORTHO05D000039 6.5e-22 109.0 215 34.4
Sopen00g007910 Solanum pennellii HOM05D000007 ORTHO05D000039 2.5e-21 107.1 259 29.7
Rhsim12G0135700 Rhododendron simsii HOM05D000298 ORTHO05D000039 1.4e-19 101.3 219 30.6
Nitab4.5_0006627g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 9.7e-18 95.1 225 33.3
PGSC0003DMG400024835 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.8e-17 93.6 106 43.4
SGA_v2.0_scaffold135G34779 Striga asiatica HOM05D000007 ORTHO05D000039 2.8e-17 93.6 216 30.6
Sopen00g012750 Solanum pennellii HOM05D000007 ORTHO05D000039 4.1e-16 89.7 251 26.7
PGSC0003DMG400019996 Solanum tuberosum HOM05D000007 ORTHO05D000039 5.3e-16 89.4 232 33.6
PGSC0003DMG400017392 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.2e-15 88.2 234 32.5
CAN.G78.127 Capsicum annuum HOM05D000007 ORTHO05D000039 2.7e-15 87.0 226 31.0
PGSC0003DMG400010976 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.5e-15 86.7 233 30.9
CAN.G475.39 Capsicum annuum HOM05D000007 ORTHO05D000039 4.5e-15 86.3 271 30.6
PGSC0003DMG400005153 Solanum tuberosum HOM05D000007 ORTHO05D000039 5.9e-15 85.9 225 28.4
PGSC0003DMG400046539 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.9e-14 83.6 230 27.8
Sopen04g026410 Solanum pennellii HOM05D000007 ORTHO05D000039 3.8e-14 83.2 147 38.8
Peaxi162Scf00074g00039 Petunia axillaris HOM05D000007 ORTHO05D000039 6.5e-14 82.4 230 30.9
Peaxi162Scf00700g00039 Petunia axillaris HOM05D000007 ORTHO05D000039 8.5e-14 82.0 236 28.4
Dinv33763 Davidia involucrata HOM05D000001 ORTHO05D000003 1.1e-13 81.6 228 26.3
Peaxi162Scf00700g00033 Petunia axillaris HOM05D000007 ORTHO05D000039 1.5e-13 81.3 183 29.5
PGSC0003DMG400046209 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.5e-13 81.3 231 28.1
Peaxi162Scf00658g00067 Petunia axillaris HOM05D000007 ORTHO05D000039 1.9e-13 80.9 218 27.5
Nitab4.5_0018243g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.2e-13 80.1 225 29.3
Sopen10g005230 Solanum pennellii HOM05D000007 ORTHO05D000039 3.2e-13 80.1 231 27.7
Duzib114G0761 Durio zibethinus HOM05D000007 ORTHO05D000039 4.2e-13 79.7 226 27.9
Nitab4.5_0000174g0110 Nicotiana tabacum HOM05D000007 ORTHO05D000039 4.2e-13 79.7 128 36.7
Nitab4.5_0005962g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000039 4.2e-13 79.7 229 28.4
Nitab4.5_0008218g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 4.2e-13 79.7 227 30.4
Peaxi162Scf00016g00259 Petunia axillaris HOM05D000007 ORTHO05D000039 5.5e-13 79.3 231 29.9
Lj7P401T34 Lonicera japonica HOM05D000007 ORTHO05D000039 7.2e-13 79.0 257 25.7
Peaxi162Scf00803g00055 Petunia axillaris HOM05D000007 ORTHO05D000039 7.2e-13 79.0 225 31.1
PGSC0003DMG400043031 Solanum tuberosum HOM05D000007 ORTHO05D000039 9.4e-13 78.6 228 26.3
Solyc10g009450.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.2e-12 78.2 233 27.9
Peaxi162Scf00700g00332 Petunia axillaris HOM05D000007 ORTHO05D000039 2.7e-12 77.0 207 29.5
Solyc04g080320.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 2.7e-12 77.0 232 28.9
PGSC0003DMG400003781 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.7e-12 77.0 236 27.5
CAN.G723.19 Capsicum annuum HOM05D000007 ORTHO05D000039 3.6e-12 76.6 206 28.6
Solyc10g009460.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 8.0e-12 75.5 231 27.3
Migut.M00112 Erythranthe guttata HOM05D000007 ORTHO05D000039 1.4e-11 74.7 223 25.6
Peaxi162Scf00700g00311 Petunia axillaris HOM05D000007 ORTHO05D000039 1.8e-11 74.3 233 27.5
PGSC0003DMG400041889 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.8e-11 74.3 149 32.9
EL10Ac9g22770 Beta vulgaris HOM05D000007 ORTHO05D000039 2.3e-11 73.9 225 27.6
PGSC0003DMG400003729 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.3e-11 73.9 232 27.6
Peaxi162Scf01075g00007 Petunia axillaris HOM05D000007 ORTHO05D000039 4.0e-11 73.2 146 34.2
Peaxi162Scf01093g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 5.2e-11 72.8 155 33.5
Nitab4.5_0007093g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 6.8e-11 72.4 217 29.5
Peaxi162Scf00362g01132 Petunia axillaris HOM05D000007 ORTHO05D000039 8.8e-11 72.0 220 29.1
Peaxi162Scf00458g00008 Petunia axillaris HOM05D000007 ORTHO05D000039 8.8e-11 72.0 134 34.3
Peaxi162Scf01075g00018 Petunia axillaris HOM05D000007 ORTHO05D000039 1.2e-10 71.6 223 29.1
PGSC0003DMG400043299 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.5e-10 71.2 234 27.4
MSTRG.14886 Avicennia marina HOM05D000007 ORTHO05D000039 2.0e-10 70.9 224 26.3
Sopen04g033920 Solanum pennellii HOM05D000044 ORTHO05D004555 2.0e-10 70.9 153 33.3
Nitab4.5_0000908g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.4e-10 70.1 113 36.3
Lj1A1095T30 Lonicera japonica HOM05D000007 ORTHO05D000039 7.5e-10 68.9 214 24.8
Nitab4.5_0004807g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 9.8e-10 68.6 158 32.9
Peaxi162Scf00803g00535 Petunia axillaris HOM05D000007 ORTHO05D000039 1.7e-09 67.8 195 28.7
Ciclev10027392m.g Citrus clementina HOM05D000007 ORTHO05D000039 2.2e-09 67.4 211 26.1
Duzib114G0947 Durio zibethinus HOM05D000007 ORTHO05D000039 3.7e-09 66.6 217 26.7
Duzib147G1674 Durio zibethinus HOM05D000007 ORTHO05D000039 6.3e-09 65.9 319 25.1
PGSC0003DMG400019998 Solanum tuberosum HOM05D000007 ORTHO05D000039 8.3e-09 65.5 194 28.9
Cfa000444 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.1e-08 65.1 196 27.0
Peaxi162Scf01571g00011 Petunia axillaris HOM05D000007 ORTHO05D000039 1.1e-08 65.1 227 28.2
Psat7g129440 Pisum sativum HOM05D000007 ORTHO05D000039 1.8e-08 64.3 241 27.4
Psat7g129480 Pisum sativum HOM05D000007 ORTHO05D000039 1.8e-08 64.3 241 27.4
Ciclev10027251m.g Citrus clementina HOM05D000007 ORTHO05D000039 3.1e-08 63.5 227 25.6
PGSC0003DMG400038531 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.1e-08 63.5 87 42.5
Lj1C1097T6 Lonicera japonica HOM05D000007 ORTHO05D000039 4.1e-08 63.2 214 23.8
Atru.chr2.2239 Acer truncatum HOM05D000007 ORTHO05D000039 5.4e-08 62.8 221 28.5
Peaxi162Scf00094g02018 Petunia axillaris HOM05D000007 ORTHO05D000039 5.4e-08 62.8 102 36.3
Thecc.10G092800 Theobroma cacao HOM05D000007 ORTHO05D000039 5.4e-08 62.8 234 24.4
CAN.G656.23 Capsicum annuum HOM05D000006 ORTHO05D000001 9.1e-08 62.0 122 34.4
Hund08648 Selenicereus undatus HOM05D000007 ORTHO05D000039 9.1e-08 62.0 176 31.8
PSO063G7550 Papaver somniferum HOM05D000007 ORTHO05D000039 1.2e-07 61.6 167 30.5
QL08p013898 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-07 61.6 231 23.8
Psat0s7414g0040 Pisum sativum HOM05D000007 ORTHO05D000039 1.6e-07 61.2 174 28.2
Lj1g0007805 Lotus japonicus HOM05D000007 ORTHO05D000039 2.7e-07 60.5 264 25.0
CAN.G46.1 Capsicum annuum HOM05D000007 ORTHO05D000039 4.5e-07 59.7 74 44.6
Psat2g002560 Pisum sativum HOM05D000007 ORTHO05D000039 5.9e-07 59.3 172 27.3
CAN.G1077.10 Capsicum annuum HOM05D000007 ORTHO05D000039 7.7e-07 58.9 165 30.3
Dinv07011 Davidia involucrata HOM05D000007 ORTHO05D000039 7.7e-07 58.9 222 28.4
Nitab4.5_0000270g0310 Nicotiana tabacum HOM05D000007 ORTHO05D000039 7.7e-07 58.9 111 36.9
EL10Ac6g13163 Beta vulgaris HOM05D000007 ORTHO05D000039 1.0e-06 58.5 236 27.1
EL10Ac2g03744 Beta vulgaris HOM05D000007 ORTHO05D000017 1.3e-06 58.2 220 26.4
ECA234G2294 Erigeron canadensis HOM05D000007 ORTHO05D000017 1.7e-06 57.8 129 31.0
Nitab4.5_0020718g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.7e-06 57.8 142 27.5
Solyc04g064460.2 Solanum lycopersicum HOM05D000007 ORTHO05D000039 2.3e-06 57.4 69 40.6
Dinv07009 Davidia involucrata HOM05D000007 ORTHO05D000039 2.9e-06 57.0 208 27.9
Nitab4.5_0002547g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.8e-06 56.6 99 34.3
Prupe.3G110000 Prunus persica HOM05D000007 ORTHO05D000039 5.0e-06 56.2 232 25.0
Peaxi162Scf00658g00066 Petunia axillaris HOM05D000007 ORTHO05D000039 6.5e-06 55.8 166 27.1
PSO210G0298 Papaver somniferum HOM05D000007 ORTHO05D000039 8.6e-06 55.5 213 26.3


User provided reference genes

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