Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 5.3e-159 564.3 286 100.0
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 5.0e-157 557.8 286 98.6
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 3.0e-146 521.9 296 90.2
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 5.2e-146 521.2 296 90.2
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 6.7e-146 520.8 296 89.9
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 3.1e-143 511.9 296 87.5
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 3.1e-135 485.3 281 89.3
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 4.1e-127 458.4 294 79.6
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 1.6e-126 456.4 296 78.4
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 2.0e-126 456.1 296 78.4
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 5.0e-125 451.4 300 77.3
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 1.1e-124 450.3 295 77.6
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 2.5e-124 449.1 295 74.9
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 5.6e-124 448.0 294 77.2
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 1.6e-123 446.4 296 75.3
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 1.6e-123 446.4 296 75.3
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 2.1e-123 446.0 295 77.3
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 2.1e-123 446.0 295 74.2
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 6.1e-123 444.5 294 77.9
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 1.0e-122 443.7 294 76.9
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 1.8e-122 443.0 296 75.7
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 1.8e-122 443.0 296 75.7
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 2.3e-122 442.6 294 75.2
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 8.9e-122 440.7 296 75.3
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 8.9e-122 440.7 294 76.9
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 1.5e-121 439.9 294 76.5
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 2.0e-121 439.5 295 73.9
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 2.6e-121 439.1 294 77.6
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 2.6e-121 439.1 295 74.9
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 4.4e-121 438.3 294 76.5
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 5.7e-121 438.0 313 70.9
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 7.5e-121 437.6 294 75.9
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 9.8e-121 437.2 296 75.0
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 9.8e-121 437.2 302 75.5
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 1.7e-120 436.4 294 75.2
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 1.7e-120 436.4 296 76.0
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 2.2e-120 436.0 295 75.6
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 2.9e-120 435.6 294 74.1
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 2.9e-120 435.6 313 70.3
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 2.9e-120 435.6 295 72.2
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 2.9e-120 435.6 294 75.2
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 3.7e-120 435.3 295 73.6
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 3.7e-120 435.3 302 75.2
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 6.4e-120 434.5 294 74.1
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 1.1e-119 433.7 294 75.5
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 3.2e-119 432.2 294 74.8
CSS0048897 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 4.1e-119 431.8 294 73.1
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 4.1e-119 431.8 294 74.5
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 5.4e-119 431.4 294 74.8
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 5.4e-119 431.4 294 74.8
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 5.4e-119 431.4 294 75.2
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 5.4e-119 431.4 294 73.5
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 7.0e-119 431.0 294 74.8
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 1.6e-118 429.9 294 73.8
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 5.9e-118 427.9 293 73.7
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 7.8e-118 427.6 294 74.5
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 7.8e-118 427.6 295 73.2
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 1.0e-117 427.2 294 72.4
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 3.0e-117 425.6 313 69.3
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 3.0e-117 425.6 294 72.4
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 3.9e-117 425.2 294 74.5
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 8.6e-117 424.1 282 74.5
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 1.1e-116 423.7 294 73.1
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 1.5e-116 423.3 295 72.9
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 7.3e-116 421.0 294 71.4
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 2.8e-115 419.1 294 74.1
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 8.0e-115 417.5 296 70.9
Sed0021762 Sechium edule HOM05D004415 ORTHO05D005198 1.8e-114 416.4 295 72.9
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 2.3e-114 416.0 338 65.1
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 4.0e-114 415.2 295 73.2
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 4.0e-114 415.2 294 71.4
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 6.8e-114 414.5 289 71.3
Psat1g018760 Pisum sativum HOM05D004415 ORTHO05D005198 1.5e-113 413.3 294 70.7
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 2.0e-113 412.9 293 71.3
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 1.3e-112 410.2 282 75.5
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 2.9e-112 409.1 293 70.6
Glyma.15G191200 Glycine max HOM05D004415 ORTHO05D005198 2.9e-112 409.1 294 69.4
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 6.4e-112 407.9 296 70.3
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 8.3e-112 407.5 296 70.3
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 8.3e-112 407.5 296 68.9
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 1.1e-111 407.1 296 69.3
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 1.9e-111 406.4 294 70.4
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 1.9e-111 406.4 294 69.0
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 2.4e-111 406.0 294 68.4
Glyma.09G083100 Glycine max HOM05D004415 ORTHO05D005198 5.4e-111 404.8 294 70.4
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 5.4e-111 404.8 296 68.9
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 7.0e-111 404.4 296 69.3
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 7.0e-111 404.4 296 68.9
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 2.7e-110 402.5 276 74.6
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 3.5e-110 402.1 295 68.1
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 3.5e-110 402.1 294 69.7
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 3.5e-110 402.1 296 68.6
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 6.0e-110 401.4 295 67.8
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 1.3e-109 400.2 296 68.9
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 1.3e-109 400.2 296 68.9
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 3.0e-109 399.1 295 69.8
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 3.9e-109 398.7 296 68.6
PSO675G6508 Papaver somniferum HOM05D004415 ORTHO05D005198 3.9e-109 398.7 295 69.2
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 6.6e-109 397.9 293 70.0
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 5.6e-108 394.8 296 68.2
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 9.5e-108 394.0 285 69.1
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 2.8e-107 392.5 293 68.9
PSO541G2694 Papaver somniferum HOM05D004415 ORTHO05D005198 3.6e-107 392.1 295 68.5
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 8.1e-107 391.0 282 68.8
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 1.5e-105 386.7 296 67.6
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 2.6e-105 386.0 266 73.7
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 5.1e-101 371.7 247 76.1
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 8.6e-101 370.9 285 69.1
Lsat_1_v5_gn_7_31101 Lactuca sativa HOM05D004415 ORTHO05D005198 2.3e-98 362.8 295 64.1
Gohir.D05G112100 Gossypium hirsutum HOM05D004415 ORTHO05D005198 1.1e-95 354.0 318 60.4
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 9.2e-95 350.9 217 81.1
AagrBONN_evm.TU.Sc2ySwM_368.1346 Anthoceros agrestis HOM05D004415 ORTHO05D005198 1.2e-89 334.0 294 57.5
Cc09_g04060 Coffea canephora HOM05D004415 ORTHO05D005198 1.5e-89 333.6 223 76.2
Lj6g0004921 Lotus japonicus HOM05D004415 ORTHO05D005198 8.4e-88 327.8 294 60.2
MELO3C021810.2 Cucumis melo HOM05D004415 ORTHO05D005198 2.1e-83 313.2 223 73.1
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 3.6e-83 312.4 294 55.8
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 4.8e-83 312.0 214 72.0
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 3.4e-81 305.8 209 70.8
HanXRQChr04g0119541 Helianthus annuus HOM05D004415 ORTHO05D005198 2.2e-80 303.1 223 69.5
AagrBONN_evm.TU.Sc2ySwM_368.3355 Anthoceros agrestis HOM05D004415 ORTHO05D005198 2.9e-80 302.8 294 54.4
Mapoly0008s0129 Marchantia polymorpha HOM05D004415 ORTHO05D005198 2.9e-80 302.8 294 53.1
arahy.Tifrunner.gnm1.ann1.QWIY8B Arachis hypogaea HOM05D004415 ORTHO05D005198 1.1e-79 300.8 273 58.2
Pp3c19_23300 Physcomitrium patens HOM05D004415 ORTHO05D005198 2.7e-78 296.2 290 54.1
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 7.9e-78 294.7 295 54.9
SMO228G0081 Selaginella moellendorffii HOM05D004415 ORTHO05D005198 2.3e-77 293.1 262 56.5
CDE03G0221 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 5.8e-73 278.5 269 58.7
CBR_g48904 Chara braunii HOM05D004415 ORTHO05D005198 1.7e-64 250.4 256 52.7
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 9.3e-63 244.6 237 55.7
MBI02_g43828_MAGBIO Magnolia biondii HOM05D004415 ORTHO05D005198 7.9e-62 241.5 150 80.7
Duzib043G0003 Durio zibethinus HOM05D004415 ORTHO05D005198 3.3e-60 236.1 177 69.5
SEGI_29507 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 1.3e-59 234.2 162 70.4
arahy.Tifrunner.gnm1.ann1.6K3MVX Arachis hypogaea HOM05D004415 ORTHO05D005198 1.4e-55 220.7 177 60.5
Gohir.A05G111501 Gossypium hirsutum HOM05D004415 ORTHO05D005198 1.1e-50 204.5 203 57.6
arahy.Tifrunner.gnm1.ann1.W2C20P Arachis hypogaea HOM05D004415 ORTHO05D005198 5.5e-47 192.2 149 61.1
Zm00001eb072080 Zea mays HOM05D004415 ORTHO05D005198 6.1e-46 188.7 143 63.6
TAR627G0753 Trochodendron aralioides HOM05D004415 ORTHO05D005198 3.0e-45 186.4 135 68.9
Oeu063144.1 Olea europaea HOM05D004415 ORTHO05D005198 5.7e-44 182.2 185 57.3
arahy.Tifrunner.gnm1.ann1.NJ63RV Arachis hypogaea HOM05D004415 ORTHO05D005198 1.5e-41 174.1 151 60.9
MCO11G422 Micromonas commoda HOM05D004415 ORTHO05D005198 1.9e-39 167.2 266 36.8
VMungo0464G1344 Vigna mungo HOM05D004415 ORTHO05D005198 1.2e-33 147.9 106 67.9
SEGI_22365 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 5.5e-31 139.0 107 66.4
arahy.Tifrunner.gnm1.ann1.YAAB6X Arachis hypogaea HOM05D004415 ORTHO05D005198 2.1e-30 137.1 132 59.1
PRCOL_00005341 Prasinoderma coloniale HOM05D004415 ORTHO05D005198 8.0e-30 135.2 304 33.9
Zm00001eb266710 Zea mays HOM05D004415 ORTHO05D005198 1.0e-29 134.8 105 60.0
Cc09_g04070 Coffea canephora HOM05D004415 ORTHO05D005198 3.2e-23 113.2 66 84.8
FvH4_3g11480 Fragaria vesca HOM05D004415 ORTHO05D005198 4.0e-21 106.3 81 64.2
arahy.Tifrunner.gnm1.ann1.479FYN Arachis hypogaea HOM05D004415 ORTHO05D005198 2.6e-20 103.6 116 53.4
Cre08.g385700 Chlamydomonas reinhardtii HOM05D004415 ORTHO05D005198 7.5e-20 102.1 270 27.4
SGA_v2.0_scaffold298G47629 Striga asiatica HOM05D004415 ORTHO05D005198 1.3e-19 101.3 128 49.2
arahy.Tifrunner.gnm1.ann1.LII2ER Arachis hypogaea HOM05D004415 ORTHO05D005198 1.1e-15 88.2 113 47.8
arahy.Tifrunner.gnm1.ann1.8SCZ96 Arachis hypogaea HOM05D004415 ORTHO05D005198 2.8e-14 83.6 113 46.0
BcaB03g15995 Brassica carinata HOM05D004415 ORTHO05D005198 2.0e-12 77.4 91 49.5
SGA_v2.0_scaffold298G47630 Striga asiatica HOM05D004415 ORTHO05D005198 1.0e-08 65.1 60 56.7
HanXRQChr04g0119531 Helianthus annuus HOM05D004415 ORTHO05D005198 3.8e-08 63.2 36 77.8
GSVIVG01003362001 Vitis vinifera HOM05D004415 ORTHO05D005198 9.5e-07 58.5 54 55.6
VMungo0331G0484 Vigna mungo HOM05D003730 ORTHO05D005198 6.1e-06 55.8 43 60.5


User provided reference genes

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