Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010403g0010 Nicotiana tabacum HOM05D004742 ORTHO05D005677 2.7e-119 432.2 245 100.0
Nitab4.5_0000529g0010 Nicotiana tabacum HOM05D004742 ORTHO05D005677 1.4e-104 383.3 247 91.9
Sopen08g025400 Solanum pennellii HOM05D004742 ORTHO05D005677 1.2e-90 337.0 249 81.1
PGSC0003DMG400017538 Solanum tuberosum HOM05D004742 ORTHO05D005677 4.5e-90 335.1 249 77.1
Solyc08g076870.1 Solanum lycopersicum HOM05D004742 ORTHO05D005677 1.0e-89 334.0 249 80.3
Dinv25223 Davidia involucrata HOM05D004742 ORTHO05D005677 4.2e-56 222.2 250 57.2
TPR.G1023 Trifolium pratense HOM05D004742 ORTHO05D005677 3.7e-52 209.1 253 49.8
Thecc.03G226400 Theobroma cacao HOM05D004742 ORTHO05D005677 5.4e-51 205.3 250 52.0
Duzib205G0563 Durio zibethinus HOM05D004742 ORTHO05D005677 1.6e-50 203.8 253 51.8
Medtr5g030210 Medicago truncatula HOM05D004742 ORTHO05D005677 2.7e-50 203.0 261 50.6
Medtr5g430370 Medicago truncatula HOM05D004742 ORTHO05D005677 2.7e-50 203.0 261 50.6
Gohir.A08G156100 Gossypium hirsutum HOM05D004742 ORTHO05D005677 1.0e-49 201.1 246 49.6
VMungo1215G1913 Vigna mungo HOM05D004742 ORTHO05D005677 6.6e-49 198.4 255 49.0
Phvul.002G140700 Phaseolus vulgaris HOM05D004742 ORTHO05D005677 1.9e-48 196.8 255 49.8
Glyma.09G205100 Glycine max HOM05D004742 ORTHO05D005677 2.5e-48 196.4 254 49.6
Lsat_1_v5_gn_3_18001 Lactuca sativa HOM05D004742 ORTHO05D005677 3.3e-48 196.1 262 47.3
Ca_06086_v3 Cicer arietinum L. HOM05D004742 ORTHO05D005677 4.3e-48 195.7 249 48.6
TWI60G1233 Tripterygium wilfordii HOM05D004742 ORTHO05D005677 7.3e-48 194.9 246 52.0
CANSAT21G2184 Cannabis sativa HOM05D004742 ORTHO05D005677 1.2e-47 194.1 256 47.7
COL.COLO4_17015 Corchorus olitorius HOM05D004742 ORTHO05D005677 8.0e-47 191.4 250 48.4
CSS0004262 Camellia sinensis var. sinensis HOM05D004742 ORTHO05D005677 1.8e-46 190.3 248 54.0
Gohir.D08G176700 Gossypium hirsutum HOM05D004742 ORTHO05D005677 1.8e-46 190.3 246 48.0
Gorai.004G184600 Gossypium raimondii HOM05D004742 ORTHO05D005677 1.8e-46 190.3 246 48.0
Glyma.01G017800 Glycine max HOM05D004742 ORTHO05D005677 3.0e-46 189.5 257 48.6
Prupe.5G034500 Prunus persica HOM05D004742 ORTHO05D005677 5.2e-46 188.7 256 48.0
Actinidia14802 Actinidia chinensis HOM05D004742 ORTHO05D005677 6.8e-46 188.3 248 48.8
Duzib084G1225 Durio zibethinus HOM05D004742 ORTHO05D005677 8.9e-46 188.0 252 49.6
Actinidia03372 Actinidia chinensis HOM05D004742 ORTHO05D005677 2.0e-45 186.8 253 56.1
Hma1.2p1_0303F.1_g119030 Hydrangea macrophylla HOM05D004742 ORTHO05D005677 2.0e-45 186.8 248 49.6
Lalb_Chr09g0325611 Lupinus albus HOM05D004742 ORTHO05D005677 2.0e-45 186.8 256 48.4
CSS0028083 Camellia sinensis var. sinensis HOM05D004742 ORTHO05D005677 3.4e-45 186.0 250 53.2
Duzib068G0638 Durio zibethinus HOM05D004742 ORTHO05D005677 2.2e-44 183.3 254 52.0
Duzib084G0476 Durio zibethinus HOM05D004742 ORTHO05D005677 2.2e-44 183.3 252 48.0
QL12p005003 Quercus lobata HOM05D004742 ORTHO05D005677 2.2e-44 183.3 240 50.8
arahy.Tifrunner.gnm1.ann1.EZQY9P Arachis hypogaea HOM05D004742 ORTHO05D005677 3.7e-44 182.6 253 48.2
arahy.Tifrunner.gnm1.ann1.RMRK9P Arachis hypogaea HOM05D004742 ORTHO05D005677 3.7e-44 182.6 253 48.2
SalBow6G3311 Salvia bowleyana HOM05D004742 ORTHO05D005677 6.4e-44 181.8 255 43.9
Nn1g00114 Nelumbo nucifera HOM05D004742 ORTHO05D005677 1.1e-43 181.0 251 48.6
PGR031G2228 Punica granatum HOM05D004742 ORTHO05D005677 1.1e-43 181.0 272 49.3
MD06G1035300 Malus domestica HOM05D004742 ORTHO05D005677 1.4e-43 180.6 257 45.1
Manes.17G011300 Manihot esculenta HOM05D004742 ORTHO05D005677 1.8e-43 180.3 250 46.8
FAN04G2756 Fragaria x ananassa HOM05D004742 ORTHO05D005677 4.1e-43 179.1 251 43.0
FAN08G0406 Fragaria x ananassa HOM05D004742 ORTHO05D005677 5.4e-43 178.7 251 43.8
HanXRQChr17g0536221 Helianthus annuus HOM05D004742 ORTHO05D005677 7.0e-43 178.3 254 50.0
FvH4_5g22200 Fragaria vesca HOM05D004742 ORTHO05D005677 9.2e-43 177.9 251 43.8
FAN13G2654 Fragaria x ananassa HOM05D004742 ORTHO05D005677 9.2e-43 177.9 251 43.0
FAN18G2180 Fragaria x ananassa HOM05D004742 ORTHO05D005677 9.2e-43 177.9 251 44.2
CiPaw.11G094200 Carya illinoinensis HOM05D004742 ORTHO05D005677 1.2e-42 177.6 247 47.4
Migut.E00942 Erythranthe guttata HOM05D004742 ORTHO05D005677 1.6e-42 177.2 251 41.8
Cfa012451 Carpinus fangiana HOM05D004742 ORTHO05D005677 5.9e-42 175.3 248 44.4
Lj2g0023551 Lotus japonicus HOM05D004742 ORTHO05D005677 7.8e-42 174.9 252 46.8
Psat2g136480 Pisum sativum HOM05D004742 ORTHO05D005677 1.0e-41 174.5 253 43.9
Gohir.A09G199100 Gossypium hirsutum HOM05D004742 ORTHO05D005677 1.7e-41 173.7 253 43.1
MD16G1273500 Malus domestica HOM05D004742 ORTHO05D005677 3.9e-41 172.6 262 43.5
CsaV3_3G001600 Cucumis sativus L. HOM05D004742 ORTHO05D005677 6.6e-41 171.8 247 48.2
Oeu006253.1 Olea europaea HOM05D004742 ORTHO05D005677 8.6e-41 171.4 252 51.6
RcHm_v2.0_Chr7g0209881 Rosa chinensis HOM05D004742 ORTHO05D005677 5.6e-40 168.7 260 45.4
Ah.12g055130 Amaranthus hybridus HOM05D004742 ORTHO05D005677 9.5e-40 167.9 246 45.5
CSS0042903 Camellia sinensis var. sinensis HOM05D004742 ORTHO05D005677 1.6e-39 167.2 249 41.8
Gohir.D11G029500 Gossypium hirsutum HOM05D004742 ORTHO05D005677 1.6e-39 167.2 249 45.8
Gohir.A11G030800 Gossypium hirsutum HOM05D004742 ORTHO05D005677 2.1e-39 166.8 252 45.2
Gorai.007G032300 Gossypium raimondii HOM05D004742 ORTHO05D005677 2.1e-39 166.8 249 42.2
Potri.001G141600 Populus trichocarpa HOM05D004742 ORTHO05D005677 2.8e-39 166.4 249 45.0
Gorai.006G216900 Gossypium raimondii HOM05D004742 ORTHO05D005677 3.6e-39 166.0 253 45.8
Nitab4.5_0008566g0010 Nicotiana tabacum HOM05D004742 ORTHO05D005677 3.6e-39 166.0 237 46.4
MELO3C027362.2 Cucumis melo HOM05D004742 ORTHO05D005677 4.7e-39 165.6 253 46.2
ClCG10G001520 Citrullus lanatus HOM05D004742 ORTHO05D005677 6.2e-39 165.2 249 47.8
Gohir.D09G193400 Gossypium hirsutum HOM05D004742 ORTHO05D005677 3.1e-38 162.9 253 45.5
Actinidia25968 Actinidia chinensis HOM05D004742 ORTHO05D005677 4.0e-38 162.5 254 51.2
HanXRQChr06g0167541 Helianthus annuus HOM05D004742 ORTHO05D005677 4.0e-38 162.5 252 40.1
Manes.15G188900 Manihot esculenta HOM05D004742 ORTHO05D005677 6.8e-38 161.8 251 44.2
CiPaw.12G064300 Carya illinoinensis HOM05D004742 ORTHO05D005677 8.9e-38 161.4 245 42.4
TAR374G0395 Trochodendron aralioides HOM05D004742 ORTHO05D005677 8.9e-38 161.4 245 45.7
MSTRG.12162 Avicennia marina HOM05D004742 ORTHO05D005677 3.4e-37 159.5 250 39.2
Lalb_Chr16g0381321 Lupinus albus HOM05D004742 ORTHO05D005677 7.5e-37 158.3 236 46.2
Eucgr.D02205 Eucalyptus grandis HOM05D004742 ORTHO05D005677 1.3e-36 157.5 258 39.9
Lj3A410T15 Lonicera japonica HOM05D004742 ORTHO05D005677 1.7e-36 157.1 248 46.8
Haze_08216 Corylus avellana HOM05D004742 ORTHO05D005677 2.2e-36 156.8 249 42.6
Sabra03G0062000 Salix brachista HOM05D004742 ORTHO05D001134 2.9e-36 156.4 232 42.7
Potri.003G092700 Populus trichocarpa HOM05D004742 ORTHO05D005677 8.3e-36 154.8 249 42.6
CSS0044674 Camellia sinensis var. sinensis HOM05D004742 ORTHO05D005677 1.1e-35 154.5 236 46.6
TAR636G0473 Trochodendron aralioides HOM05D004742 ORTHO05D005677 3.2e-35 152.9 248 40.3
Ciclev10016629m.g Citrus clementina HOM05D004742 ORTHO05D005677 4.1e-35 152.5 247 47.8
EL10Ac5g12098 Beta vulgaris HOM05D004742 ORTHO05D005677 7.0e-35 151.8 245 42.0
SGA_v2.0_scaffold20G09271 Striga asiatica HOM05D004742 ORTHO05D005677 1.6e-34 150.6 256 39.1
Lsat_1_v5_gn_6_421 Lactuca sativa HOM05D004742 ORTHO05D005677 2.0e-34 150.2 257 40.9
SGA_v2.0_scaffold6G03142 Striga asiatica HOM05D004742 ORTHO05D005677 2.7e-34 149.8 252 39.7
Cc08_g02870 Coffea canephora HOM05D004742 ORTHO05D005677 7.8e-34 148.3 269 45.7
Hma1.2p1_0574F.1_g181490 Hydrangea macrophylla HOM05D004742 ORTHO05D005677 1.7e-33 147.1 282 39.0
Rhsim07G0128300 Rhododendron simsii HOM05D004742 ORTHO05D005677 1.7e-33 147.1 246 40.7
TAR629G2541 Trochodendron aralioides HOM05D004742 ORTHO05D005677 1.7e-33 147.1 161 57.1
Atru.chr6.1683 Acer truncatum HOM05D004742 ORTHO05D005677 6.6e-33 145.2 245 42.4
THA.LOC104812742 Tarenaya hassleriana HOM05D004742 ORTHO05D005677 1.9e-32 143.7 246 40.2
DCAR_008263 Daucus carota HOM05D004742 ORTHO05D005677 4.3e-32 142.5 274 42.3
Nitab4.5_0006434g0030 Nicotiana tabacum HOM05D004742 ORTHO05D005677 9.5e-32 141.4 235 41.3
Rhsim11G0016100 Rhododendron simsii HOM05D004742 ORTHO05D005677 1.2e-31 141.0 204 52.5
THA.LOC104814447 Tarenaya hassleriana HOM05D004742 ORTHO05D005677 1.4e-30 137.5 249 37.3
EL10Ac5g12097 Beta vulgaris HOM05D004742 ORTHO05D005677 6.8e-30 135.2 236 40.3
CARHR032080 Cardamine hirsuta HOM05D004742 ORTHO05D005677 2.2e-28 130.2 247 38.5
Aqoxy3G02336 Aquilegia oxysepala HOM05D004742 ORTHO05D005677 2.1e-26 123.6 266 43.2
Sopen08g001110 Solanum pennellii HOM05D004742 ORTHO05D005677 3.5e-26 122.9 323 32.5
Sed0001883 Sechium edule HOM05D004742 ORTHO05D005677 6.0e-26 122.1 249 39.4
Thhalv10008795m.g Eutrema salsugineum HOM05D004742 ORTHO05D005677 1.3e-25 120.9 245 36.3
DCAR_032208 Daucus carota HOM05D004742 ORTHO05D005677 2.3e-25 120.2 242 34.3
Solyc08g005090.2 Solanum lycopersicum HOM05D004742 ORTHO05D005677 3.9e-25 119.4 320 31.9
Aa31LG9G15210 Aethionema arabicum HOM05D004742 ORTHO05D005677 8.6e-25 118.2 254 33.9
DCAR_004297 Daucus carota HOM05D004742 ORTHO05D005677 8.6e-25 118.2 248 33.5
PGSC0003DMG400017843 Solanum tuberosum HOM05D004742 ORTHO05D005677 1.5e-24 117.5 327 33.0
Aa31LG2G13280 Aethionema arabicum HOM05D004742 ORTHO05D005677 7.3e-24 115.2 249 44.2
Carub.0001s3103 Capsella rubella HOM05D004742 ORTHO05D005677 4.7e-23 112.5 242 40.9
BcaB03g13715 Brassica carinata HOM05D004742 ORTHO05D005677 1.8e-22 110.5 241 37.3
AL1G46920 Arabidopsis lyrata HOM05D004742 ORTHO05D005677 2.4e-22 110.2 249 35.3
AT1G32690 Arabidopsis thaliana HOM05D004742 ORTHO05D005677 5.2e-22 109.0 251 35.9
HanXRQChr12g0360911 Helianthus annuus HOM05D004742 ORTHO05D005677 6.8e-22 108.6 259 32.0
Sp4g17420 Schrenkiella parvula HOM05D004742 ORTHO05D005677 1.5e-21 107.5 253 32.8
A05p24650 Brassica napus HOM05D004742 ORTHO05D005677 4.4e-21 105.9 241 39.0
BraA05t21351Z Brassica rapa HOM05D004742 ORTHO05D005677 4.4e-21 105.9 241 39.0
Thhalv10017262m.g Eutrema salsugineum HOM05D004742 ORTHO05D005677 2.2e-20 103.6 242 33.1
Sp1g28270 Schrenkiella parvula HOM05D004742 ORTHO05D005677 2.2e-20 103.6 245 31.8
A05p10550 Brassica napus HOM05D004742 ORTHO05D005677 6.4e-20 102.1 224 33.5
BraA05t19993Z Brassica rapa HOM05D004742 ORTHO05D005677 6.4e-20 102.1 224 33.5
BcaC02g11593 Brassica carinata HOM05D004742 ORTHO05D005677 8.4e-20 101.7 224 33.5
BcaC01g01725 Brassica carinata HOM05D004742 ORTHO05D005677 1.1e-19 101.3 241 32.4
C03p72460 Brassica napus HOM05D004742 ORTHO05D005677 1.1e-19 101.3 241 32.4
BolC3t19547H Brassica oleracea HOM05D004742 ORTHO05D005677 1.1e-19 101.3 241 32.8
BcaC05g27832 Brassica carinata HOM05D004742 ORTHO05D005677 1.9e-19 100.5 236 34.3
C05p38300 Brassica napus HOM05D004742 ORTHO05D005677 1.9e-19 100.5 236 34.3
BolC5t32562H Brassica oleracea HOM05D004742 ORTHO05D005677 1.9e-19 100.5 236 34.3
Peaxi162Scf00045g00023 Petunia axillaris HOM05D004742 ORTHO05D005677 5.4e-19 99.0 214 35.0
Carub.0004s1689 Capsella rubella HOM05D004742 ORTHO05D005677 9.2e-19 98.2 223 33.6
TAR375G0192 Trochodendron aralioides HOM05D004742 ORTHO05D005677 3.5e-18 96.3 161 39.1
HPP92_014611 Vanilla planifolia HOM05D004742 ORTHO05D005677 1.0e-17 94.7 228 35.5
AUR62018706 Chenopodium quinoa HOM05D004742 ORTHO05D005677 1.7e-17 94.0 248 31.9
C04p13600 Brassica napus HOM05D004742 ORTHO05D005677 2.3e-17 93.6 226 33.6
BolC4t22951H Brassica oleracea HOM05D004742 ORTHO05D005677 3.9e-17 92.8 225 33.8
MBI04_g25303_MAGBIO Magnolia biondii HOM05D004742 ORTHO05D005677 5.1e-17 92.4 223 33.6
AL4G31210 Arabidopsis lyrata HOM05D004742 ORTHO05D005677 1.1e-16 91.3 239 33.1
Lj8P301T9 Lonicera japonica HOM05D004742 ORTHO05D005677 2.5e-16 90.1 155 41.9
HPP92_020967 Vanilla planifolia HOM05D004742 ORTHO05D005677 3.3e-16 89.7 113 46.9
MBI04_g46668_MAGBIO Magnolia biondii HOM05D004742 ORTHO05D005677 5.6e-16 89.0 219 33.3
CARHR129360 Cardamine hirsuta HOM05D004742 ORTHO05D005677 7.3e-16 88.6 250 32.0
CDE06G1944 Ceratophyllum demersum HOM05D003296 ORTHO05D003720 4.0e-14 82.8 182 35.7
ECA233G6051 Erigeron canadensis HOM05D007880 ORTHO05D003386 2.6e-13 80.1 245 34.3
CDE11G0293 Ceratophyllum demersum HOM05D004742 ORTHO05D005677 1.7e-12 77.4 144 36.1
AT2G35200 Arabidopsis thaliana HOM05D004742 ORTHO05D005677 3.8e-12 76.3 239 31.0
ATR0665G540 Amborella trichopoda HOM05D004742 ORTHO05D005677 6.4e-12 75.5 252 34.9
PSO210G7694 Papaver somniferum HOM05D004742 ORTHO05D005677 6.4e-12 75.5 258 25.6
Zm00001eb251250 Zea mays HOM05D004742 ORTHO05D005677 2.4e-11 73.6 146 39.0
AUR62007299 Chenopodium quinoa HOM05D004742 ORTHO05D005677 3.0e-09 66.6 142 38.7
Os02g0693000 Oryza sativa ssp. japonica HOM05D004742 ORTHO05D005677 1.9e-08 63.9 37 67.6
Os04g0591300 Oryza sativa ssp. japonica HOM05D004742 ORTHO05D005677 2.8e-07 60.1 39 61.5
COL.COLO4_27716 Corchorus olitorius HOM05D004568 ORTHO05D005343 1.1e-06 58.2 200 28.5
CDE03G0209 Ceratophyllum demersum HOM05D004742 ORTHO05D005677 1.4e-06 57.8 165 30.9
CSS0009789 Camellia sinensis var. sinensis HOM05D004742 ORTHO05D005677 5.3e-06 55.8 112 38.4


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