Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 4.8e-70 267.7 133 100.0
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 3.2e-58 228.4 133 88.0
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 7.9e-57 223.8 131 81.7
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 1.5e-55 219.5 133 76.7
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 2.5e-55 218.8 133 78.9
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 3.3e-55 218.4 133 78.9
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 4.8e-54 214.5 134 80.6
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.1e-53 213.4 156 69.2
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 2.0e-52 209.1 131 79.4
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 1.4e-50 203.0 131 71.8
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 2.5e-50 202.2 131 71.8
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 3.2e-50 201.8 131 72.5
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 4.2e-50 201.4 133 71.4
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 7.2e-50 200.7 131 71.8
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 9.4e-50 200.3 130 73.1
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 1.2e-49 199.9 131 71.8
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 1.2e-49 199.9 131 72.5
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 2.1e-49 199.1 131 70.2
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 2.7e-49 198.7 131 73.3
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 2.7e-49 198.7 131 71.0
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 3.6e-49 198.4 131 73.3
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 6.1e-49 197.6 131 71.8
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 6.1e-49 197.6 131 71.8
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 7.9e-49 197.2 131 70.2
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 7.9e-49 197.2 131 70.2
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 7.9e-49 197.2 131 71.0
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 1.0e-48 196.8 133 69.9
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.4e-48 196.4 131 69.5
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 1.4e-48 196.4 131 71.8
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 1.8e-48 196.1 127 71.7
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 1.8e-48 196.1 131 70.2
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.3e-48 195.7 131 69.5
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 2.3e-48 195.7 131 71.0
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 3.9e-48 194.9 133 69.9
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 5.1e-48 194.5 131 69.5
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 6.7e-48 194.1 131 67.9
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 6.7e-48 194.1 133 71.4
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 8.8e-48 193.7 131 69.5
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 1.1e-47 193.4 131 70.2
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 1.1e-47 193.4 131 68.7
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 1.5e-47 193.0 127 71.7
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 1.5e-47 193.0 131 69.5
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 1.5e-47 193.0 131 68.7
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 1.5e-47 193.0 133 75.2
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 2.0e-47 192.6 130 72.3
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 2.6e-47 192.2 139 67.6
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 2.6e-47 192.2 131 70.2
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 4.4e-47 191.4 133 66.9
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 4.4e-47 191.4 133 66.9
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 4.4e-47 191.4 126 70.6
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 7.4e-47 190.7 131 67.9
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 7.4e-47 190.7 131 67.9
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 7.4e-47 190.7 131 67.9
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 7.4e-47 190.7 131 67.2
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 9.7e-47 190.3 131 69.5
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 9.7e-47 190.3 131 66.4
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 1.3e-46 189.9 134 67.2
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 1.7e-46 189.5 131 68.7
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 2.8e-46 188.7 134 65.7
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 2.8e-46 188.7 127 71.7
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 3.7e-46 188.3 131 69.5
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 4.8e-46 188.0 123 69.1
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 4.8e-46 188.0 134 66.4
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 8.2e-46 187.2 123 70.7
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 1.1e-45 186.8 131 66.4
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 1.4e-45 186.4 123 70.7
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 1.4e-45 186.4 131 66.4
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 1.8e-45 186.0 127 71.7
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 1.8e-45 186.0 127 71.7
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 1.8e-45 186.0 127 71.7
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.8e-45 186.0 123 68.3
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.8e-45 186.0 123 68.3
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 2.4e-45 185.7 127 70.1
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 2.4e-45 185.7 131 66.4
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 2.4e-45 185.7 131 66.4
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 3.1e-45 185.3 133 66.9
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 4.1e-45 184.9 127 70.9
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 4.1e-45 184.9 127 70.9
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 4.1e-45 184.9 131 66.4
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 4.1e-45 184.9 127 70.1
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 4.1e-45 184.9 130 63.1
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 5.3e-45 184.5 127 70.9
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 5.3e-45 184.5 127 70.9
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 5.3e-45 184.5 134 64.2
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 7.0e-45 184.1 127 70.9
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 9.1e-45 183.7 123 71.5
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 1.2e-44 183.3 127 69.3
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 1.2e-44 183.3 127 69.3
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 2.0e-44 182.6 127 68.5
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 2.0e-44 182.6 128 68.8
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 2.6e-44 182.2 134 66.4
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 7.7e-44 180.6 131 65.6
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 1.0e-43 180.3 131 66.4
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 1.0e-43 180.3 131 67.9
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 1.3e-43 179.9 127 68.5
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 1.7e-43 179.5 136 67.6
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 2.2e-43 179.1 131 64.9
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 3.8e-43 178.3 124 66.1
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 5.0e-43 177.9 137 66.4
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 8.5e-43 177.2 136 65.4
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 8.5e-43 177.2 136 65.4
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 8.5e-43 177.2 136 65.4
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 1.1e-42 176.8 140 65.0
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 1.9e-42 176.0 132 63.6
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 2.5e-42 175.6 136 64.7
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 3.2e-42 175.3 130 61.5
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 4.2e-42 174.9 131 64.9
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 1.2e-41 173.3 129 64.3
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 1.2e-41 173.3 131 66.4
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 2.1e-41 172.6 130 61.5
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 2.3e-40 169.1 131 63.4
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 2.4e-37 159.1 170 49.4
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.7e-35 152.9 95 78.9
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 1.9e-34 149.4 104 69.2
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 4.2e-34 148.3 120 59.2
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 5.7e-31 137.9 136 52.9
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 5.7e-31 137.9 93 69.9
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 1.3e-30 136.7 127 56.7
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 1.3e-30 136.7 136 53.7
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 2.7e-28 129.0 122 52.5
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.1e-26 123.6 72 80.6
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 2.0e-23 112.8 77 68.8
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 5.4e-21 104.8 72 66.7
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 7.0e-21 104.4 60 80.0
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 7.0e-21 104.4 60 80.0
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 1.2e-20 103.6 76 64.5
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 1.2e-20 103.6 71 69.0
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 2.7e-20 102.4 75 62.7
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 5.9e-20 101.3 71 63.4
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 7.7e-20 100.9 118 42.4
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.3e-19 99.4 75 61.3
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 2.3e-19 99.4 61 75.4
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 5.0e-19 98.2 60 73.3
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 8.6e-19 97.4 60 73.3
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 1.1e-18 97.1 72 63.9
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 1.5e-18 96.7 68 67.6
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 3.3e-18 95.5 71 63.4
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 1.2e-17 93.6 71 63.4
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 6.8e-16 87.8 64 65.6
PGSC0003DMG400003395 Solanum tuberosum HOM05D005138 ORTHO05D006318 2.4e-13 79.3 53 67.9
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 3.2e-13 79.0 116 36.2
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 1.6e-12 76.6 56 62.5
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 1.0e-11 73.9 74 45.9
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 3.9e-11 72.0 77 48.1
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 2.5e-10 69.3 50 60.0
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 4.3e-10 68.6 106 32.1
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 5.6e-10 68.2 58 56.9
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 6.8e-08 61.2 104 31.7
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 8.9e-08 60.8 106 29.2
BcaC04g23227 Brassica carinata HOM05D004238 ORTHO05D004934 4.9e-06 55.1 38 68.4
C08p35620 Brassica napus HOM05D004238 ORTHO05D004934 8.3e-06 54.3 28 85.7
BolC9t53984H Brassica oleracea HOM05D004238 ORTHO05D004934 8.3e-06 54.3 28 85.7


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