Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010372g0010 Nicotiana tabacum HOM05D000440 ORTHO05D000295 6.8e-75 284.3 184 100.0
Peaxi162Scf00199g00109 Petunia axillaris HOM05D000440 ORTHO05D000295 3.4e-26 122.5 131 62.6
PGSC0003DMG400009420 Solanum tuberosum HOM05D000440 ORTHO05D000295 5.3e-19 98.6 131 63.4
Solyc02g068415.1 Solanum lycopersicum HOM05D000440 ORTHO05D000295 9.1e-19 97.8 128 63.3
Sopen02g017550 Solanum pennellii HOM05D000440 ORTHO05D000295 9.4e-16 87.8 65 81.5
TAR629G3410 Trochodendron aralioides HOM05D000440 ORTHO05D000295 2.3e-14 83.2 127 43.3
Nn7g38307 Nelumbo nucifera HOM05D000440 ORTHO05D000295 3.9e-14 82.4 127 49.6
CSS0022861 Camellia sinensis var. sinensis HOM05D000440 ORTHO05D000295 5.7e-13 78.6 125 40.0
CiPaw.10G062100 Carya illinoinensis HOM05D000440 ORTHO05D000295 1.3e-12 77.4 122 36.9
Duzib248G1396 Durio zibethinus HOM05D000440 ORTHO05D000295 1.4e-11 73.9 126 37.3
FvH4_3g12790 Fragaria vesca HOM05D000440 ORTHO05D000295 1.4e-11 73.9 144 32.6
FAN25G0356 Fragaria x ananassa HOM05D000440 ORTHO05D000295 1.8e-11 73.6 144 32.6
Gohir.D12G047766 Gossypium hirsutum HOM05D000440 ORTHO05D000295 1.8e-11 73.6 126 44.4
Duzib132G1107 Durio zibethinus HOM05D000440 ORTHO05D000295 2.4e-11 73.2 121 51.2
QL11p012720 Quercus lobata HOM05D000440 ORTHO05D000295 3.1e-11 72.8 127 38.6
FAN21G3106 Fragaria x ananassa HOM05D000440 ORTHO05D000295 7.0e-11 71.6 87 42.5
Thecc.02G005100 Theobroma cacao HOM05D000440 ORTHO05D000295 9.1e-11 71.2 126 42.9
COL.COLO4_18020 Corchorus olitorius HOM05D000440 ORTHO05D000295 2.0e-10 70.1 144 37.5
Gohir.A12G048700 Gossypium hirsutum HOM05D000440 ORTHO05D000295 3.5e-10 69.3 100 47.0
Gohir.A12G049300 Gossypium hirsutum HOM05D000440 ORTHO05D000295 3.5e-10 69.3 124 45.2
Gohir.D12G047500 Gossypium hirsutum HOM05D000440 ORTHO05D000295 3.5e-10 69.3 100 44.0
Gorai.008G050200 Gossypium raimondii HOM05D000440 ORTHO05D000295 3.5e-10 69.3 100 48.0
Gorai.008G050600 Gossypium raimondii HOM05D000440 ORTHO05D000295 3.5e-10 69.3 124 37.1
MD05G1247700 Malus domestica HOM05D000440 ORTHO05D000295 3.5e-10 69.3 65 52.3
Lj4g0008854 Lotus japonicus HOM05D000440 ORTHO05D000295 4.5e-10 68.9 144 31.2
Manes.16G051700 Manihot esculenta HOM05D000440 ORTHO05D000295 1.0e-09 67.8 123 32.5
Sabra01G0132500 Salix brachista HOM05D000440 ORTHO05D000295 1.0e-09 67.8 141 33.3
RcHm_v2.0_Chr5g0020761 Rosa chinensis HOM05D000440 ORTHO05D000295 1.3e-09 67.4 87 49.4
TWI38G0864 Tripterygium wilfordii HOM05D000440 ORTHO05D000295 1.3e-09 67.4 128 47.7
TWI63G1239 Tripterygium wilfordii HOM05D000440 ORTHO05D000295 1.7e-09 67.0 121 47.9
Potri.001G159300 Populus trichocarpa HOM05D000440 ORTHO05D000295 2.9e-09 66.2 121 52.9
Potri.003G075200 Populus trichocarpa HOM05D000440 ORTHO05D000295 2.9e-09 66.2 121 33.1
MD10G1228500 Malus domestica HOM05D000440 ORTHO05D000295 5.0e-09 65.5 63 52.4
Psat7g088080 Pisum sativum HOM05D000440 ORTHO05D000295 6.5e-09 65.1 126 28.6
Prupe.4G116300 Prunus persica HOM05D000440 ORTHO05D000295 6.5e-09 65.1 65 53.8
Ciclev10016941m.g Citrus clementina HOM05D000440 ORTHO05D000295 1.9e-08 63.5 65 47.7
CsaV3_6G052800 Cucumis sativus L. HOM05D000440 ORTHO05D000295 2.5e-08 63.2 146 26.0
Lj1P1148T23 Lonicera japonica HOM05D000440 ORTHO05D000295 3.2e-08 62.8 65 47.7
Medtr2g035800 Medicago truncatula HOM05D000440 ORTHO05D000295 3.2e-08 62.8 90 52.2
ClCG01G025550 Citrullus lanatus HOM05D000440 ORTHO05D000295 4.2e-08 62.4 123 30.1
Ca_18237_v3 Cicer arietinum L. HOM05D000440 ORTHO05D000295 7.2e-08 61.6 106 32.1
Glyma.15G157400 Glycine max HOM05D000440 ORTHO05D000295 7.2e-08 61.6 64 45.3
Atru.chr10.398 Acer truncatum HOM05D000440 ORTHO05D000295 9.4e-08 61.2 118 33.1
MBI18_g05077_MAGBIO Magnolia biondii HOM05D000440 ORTHO05D000295 9.4e-08 61.2 65 46.2
Sed0004862 Sechium edule HOM05D000440 ORTHO05D000295 9.4e-08 61.2 120 30.8
Medtr4g094725 Medicago truncatula HOM05D000440 ORTHO05D000295 1.6e-07 60.5 132 26.5
Haze_06162 Corylus avellana HOM05D000440 ORTHO05D000295 6.1e-07 58.5 122 33.6
TPR.G31248 Trifolium pratense HOM05D000440 ORTHO05D000295 6.1e-07 58.5 75 34.7
TPR.G31844 Trifolium pratense HOM05D000440 ORTHO05D000295 6.1e-07 58.5 121 47.1
Psat1g149920 Pisum sativum HOM05D000440 ORTHO05D000295 1.0e-06 57.8 122 34.4
Phvul.002G189200 Phaseolus vulgaris HOM05D000440 ORTHO05D000295 3.0e-06 56.2 86 34.9
VMungo1309G1069 Vigna mungo HOM05D000440 ORTHO05D000295 3.0e-06 56.2 64 40.6
Phvul.009G242500 Phaseolus vulgaris HOM05D000440 ORTHO05D000295 4.0e-06 55.8 122 30.3
Lalb_Chr07g0188291 Lupinus albus HOM05D000440 ORTHO05D000295 5.2e-06 55.5 63 42.9
VMungo0251G2532 Vigna mungo HOM05D000440 ORTHO05D000295 5.2e-06 55.5 63 42.9
Glyma.05G133600 Glycine max HOM05D000440 ORTHO05D000295 6.7e-06 55.1 65 43.1


User provided reference genes

Program Settings