Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 4.8e-58 227.6 116 100.0
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 6.3e-50 200.7 105 94.3
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 5.3e-49 197.6 102 96.1
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 4.2e-46 188.0 96 99.0
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 4.2e-46 188.0 102 92.2
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.6e-45 186.0 102 91.2
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 2.7e-45 185.3 102 93.1
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 3.6e-45 184.9 102 89.2
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 6.1e-45 184.1 102 87.3
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 1.4e-44 183.0 102 85.3
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 1.8e-44 182.6 102 85.3
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 5.1e-44 181.0 102 91.2
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 6.7e-44 180.6 102 90.2
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.1e-43 179.9 104 87.5
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 1.3e-42 176.4 103 88.3
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 2.2e-42 175.6 104 87.5
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 2.8e-42 175.3 102 81.4
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 3.7e-42 174.9 102 86.3
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 6.3e-42 174.1 103 87.4
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 8.2e-42 173.7 102 86.3
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 1.4e-41 172.9 101 83.2
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.4e-41 172.9 95 87.4
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.4e-41 172.9 95 87.4
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.4e-41 172.2 103 84.5
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 2.4e-41 172.2 102 85.3
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 3.1e-41 171.8 104 83.7
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 6.9e-41 170.6 103 85.4
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 6.9e-41 170.6 96 83.3
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 9.1e-41 170.2 103 82.5
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 1.2e-40 169.9 103 84.5
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 1.2e-40 169.9 96 89.6
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 4.5e-40 167.9 102 81.4
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 5.9e-40 167.5 103 85.4
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 5.9e-40 167.5 105 85.7
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 2.9e-39 165.2 96 83.3
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.8e-39 164.9 103 85.4
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 5.0e-39 164.5 108 79.6
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 6.5e-39 164.1 107 77.6
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 6.5e-39 164.1 103 80.6
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 6.5e-39 164.1 101 82.2
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 1.1e-38 163.3 102 84.3
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 1.9e-38 162.5 102 83.3
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 4.2e-38 161.4 108 76.9
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 9.4e-38 160.2 94 84.0
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 9.4e-38 160.2 102 82.4
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 9.4e-38 160.2 101 81.2
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 1.2e-37 159.8 108 81.5
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 1.2e-37 159.8 110 76.4
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 3.6e-37 158.3 103 77.7
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.8e-36 156.0 107 73.8
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 3.0e-36 155.2 102 80.4
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 3.9e-36 154.8 95 83.2
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 6.7e-36 154.1 112 73.2
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 6.7e-36 154.1 112 73.2
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 6.7e-36 154.1 98 78.6
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.1e-35 153.3 108 77.8
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.5e-35 152.9 97 82.5
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 1.5e-35 152.9 92 81.5
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 5.7e-35 151.0 101 77.2
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 5.7e-35 151.0 101 72.3
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 7.4e-35 150.6 85 88.2
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 6.3e-34 147.5 106 78.3
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.4e-33 146.4 103 72.8
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 1.8e-33 146.0 110 71.8
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 1.8e-33 146.0 113 71.7
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 2.4e-33 145.6 101 76.2
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 1.2e-32 143.3 112 71.4
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 1.5e-32 142.9 100 74.0
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 7.7e-32 140.6 103 75.7
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 7.7e-32 140.6 103 75.7
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 7.7e-32 140.6 109 72.5
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 7.7e-32 140.6 109 74.3
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 1.0e-31 140.2 97 74.2
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 1.3e-31 139.8 84 82.1
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 2.2e-31 139.0 113 70.8
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 2.9e-31 138.7 94 76.6
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 2.9e-31 138.7 114 69.3
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 5.0e-31 137.9 105 68.6
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 1.1e-30 136.7 126 65.9
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 1.5e-30 136.3 106 66.0
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 1.9e-30 136.0 111 69.4
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 2.5e-30 135.6 105 66.7
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 2.5e-30 135.6 109 67.0
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 3.2e-30 135.2 111 70.3
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 4.2e-30 134.8 115 69.6
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 5.5e-30 134.4 113 69.9
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 5.5e-30 134.4 111 69.4
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 7.2e-30 134.0 114 69.3
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 9.4e-30 133.7 89 77.5
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 2.1e-29 132.5 106 72.6
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 1.4e-28 129.8 101 61.4
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 1.8e-28 129.4 116 63.8
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 5.2e-28 127.9 109 66.1
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 8.8e-28 127.1 64 100.0
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.1e-27 126.7 117 64.1
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 2.6e-27 125.6 107 69.2
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 2.6e-27 125.6 107 69.2
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 7.4e-27 124.0 101 61.4
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.8e-26 122.1 86 76.7
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 3.7e-26 121.7 101 65.3
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 6.3e-26 120.9 107 65.4
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 1.1e-25 120.2 114 58.8
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 1.4e-25 119.8 112 66.1
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 1.4e-25 119.8 110 62.7
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 2.4e-25 119.0 115 64.3
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 2.4e-25 119.0 106 64.2
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 1.2e-24 116.7 114 60.5
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 5.9e-24 114.4 113 59.3
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 3.8e-23 111.7 78 78.2
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 4.7e-21 104.8 94 61.7
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 6.1e-21 104.4 103 57.3
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 5.7e-19 97.8 57 91.2
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.4e-17 93.2 70 77.1
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 9.1e-17 90.5 82 67.1
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 1.0e-15 87.0 86 62.8
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 1.2e-13 80.1 50 82.0
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 1.4e-12 76.6 115 46.1
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 2.0e-11 72.8 106 46.2
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 4.8e-10 68.2 55 72.7
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 5.4e-09 64.7 104 42.3
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 5.9e-08 61.2 103 42.7


User provided reference genes

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