Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010352g0060 Nicotiana tabacum HOM05D007716 ORTHO05D009780 4.4e-62 241.1 121 100.0
Nitab4.5_0009020g0070 Nicotiana tabacum HOM05D007716 ORTHO05D009780 8.5e-58 226.9 121 95.0
PGSC0003DMG400003116 Solanum tuberosum HOM05D007716 ORTHO05D009780 2.1e-48 195.7 122 78.7
Peaxi162Scf00299g00026 Petunia axillaris HOM05D007716 ORTHO05D009780 2.7e-48 195.3 118 80.5
Sopen01g048750 Solanum pennellii HOM05D007716 ORTHO05D009780 2.7e-48 195.3 121 78.5
Solyc01g106380.2 Solanum lycopersicum HOM05D007716 ORTHO05D009780 1.8e-47 192.6 126 75.4
Hma1.2p1_0703F.1_g206280 Hydrangea macrophylla HOM05D007716 ORTHO05D009780 7.5e-38 160.6 117 65.8
Manes.10G092200 Manihot esculenta HOM05D007716 ORTHO05D009780 6.3e-37 157.5 119 60.5
QL11p026900 Quercus lobata HOM05D007716 ORTHO05D009780 3.1e-36 155.2 120 61.7
Ciclev10029299m.g Citrus clementina HOM05D007716 ORTHO05D009780 7.8e-35 150.6 118 61.9
Prupe.8G076600 Prunus persica HOM05D007716 ORTHO05D009780 1.0e-34 150.2 121 59.5
CiPaw.05G026000 Carya illinoinensis HOM05D007716 ORTHO05D009780 5.0e-34 147.9 120 57.5
Thecc.02G037300 Theobroma cacao HOM05D007716 ORTHO05D009780 6.6e-34 147.5 118 59.3
COL.COLO4_17851 Corchorus olitorius HOM05D007716 ORTHO05D009780 1.5e-33 146.4 118 61.9
Haze_10368 Corylus avellana HOM05D007716 ORTHO05D009780 3.3e-33 145.2 120 57.5
Potri.009G080400 Populus trichocarpa HOM05D007716 ORTHO05D009780 5.6e-33 144.4 119 58.8
Sabra09G0062200 Salix brachista HOM05D007716 ORTHO05D009780 7.3e-33 144.1 118 58.5
Potri.001G286200 Populus trichocarpa HOM05D007716 ORTHO05D009780 9.5e-33 143.7 118 58.5
Gohir.D12G040700 Gossypium hirsutum HOM05D007716 ORTHO05D009780 2.1e-32 142.5 118 56.8
Gorai.008G042500 Gossypium raimondii HOM05D007716 ORTHO05D009780 2.8e-32 142.1 118 55.9
Cpa.g.sc20.53 Carica papaya HOM05D007716 ORTHO05D009780 3.6e-32 141.7 121 56.2
Nn5g29758 Nelumbo nucifera HOM05D007716 ORTHO05D009780 3.6e-32 141.7 121 57.0
Cc02_g20520 Coffea canephora HOM05D007716 ORTHO05D009780 4.7e-32 141.4 122 58.2
Gohir.A12G031600 Gossypium hirsutum HOM05D007716 ORTHO05D009780 8.0e-32 140.6 118 56.8
TWI23G0541 Tripterygium wilfordii HOM05D007716 ORTHO05D009780 1.4e-31 139.8 118 56.8
Duzib132G0367 Durio zibethinus HOM05D007716 ORTHO05D009780 1.8e-31 139.4 118 55.9
Oeu059885.1 Olea europaea HOM05D007716 ORTHO05D009780 3.0e-31 138.7 108 61.1
Sabra16G0178700 Salix brachista HOM05D007716 ORTHO05D009780 3.0e-31 138.7 118 56.8
MSTRG.16641 Avicennia marina HOM05D007716 ORTHO05D009780 6.8e-31 137.5 118 55.1
PGR142G1403 Punica granatum HOM05D007716 ORTHO05D009780 1.3e-29 133.3 123 55.3
MD10G1057800 Malus domestica HOM05D007716 ORTHO05D009780 2.2e-29 132.5 130 53.1
TAR628G0805 Trochodendron aralioides HOM05D007716 ORTHO05D009780 6.4e-29 131.0 117 56.4
Lsat_1_v5_gn_7_83180 Lactuca sativa HOM05D007716 ORTHO05D009780 4.1e-28 128.3 130 47.7
SalBow6G6774 Salvia bowleyana HOM05D007716 ORTHO05D009780 7.0e-28 127.5 117 47.9
vmacro01903 Vaccinium macrocarpon HOM05D001206 ORTHO05D002068 7.0e-28 127.5 114 55.3
FAN15G0824 Fragaria x ananassa HOM05D007716 ORTHO05D009780 1.2e-27 126.7 118 51.7
FvH4_2g11070 Fragaria vesca HOM05D007716 ORTHO05D009780 2.0e-27 125.9 118 51.7
PSO210G3893 Papaver somniferum HOM05D007716 ORTHO05D009780 2.0e-27 125.9 123 52.0
FAN20G1331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 3.5e-27 125.2 118 50.8
Migut.B00514 Erythranthe guttata HOM05D007716 ORTHO05D009780 4.6e-27 124.8 115 47.8
RcHm_v2.0_Chr6g0269271 Rosa chinensis HOM05D007716 ORTHO05D009780 4.6e-27 124.8 121 52.9
Atru.chr6.1374 Acer truncatum HOM05D007716 ORTHO05D009780 7.8e-27 124.0 120 52.5
FAN24G2612 Fragaria x ananassa HOM05D007716 ORTHO05D009780 7.8e-27 124.0 118 50.8
PSO761G0345 Papaver somniferum HOM05D007716 ORTHO05D009780 7.8e-27 124.0 124 50.8
CANSAT54G1223 Cannabis sativa HOM05D007716 ORTHO05D009780 1.7e-26 122.9 126 46.8
ClCG10G009750 Citrullus lanatus HOM05D007716 ORTHO05D009780 3.0e-26 122.1 116 54.3
THA.LOC104799649 Tarenaya hassleriana HOM05D007716 ORTHO05D009780 3.0e-26 122.1 124 50.0
Aqoxy6G00623 Aquilegia oxysepala HOM05D000043 ORTHO05D002888 6.6e-26 120.9 123 50.4
C03p61760 Brassica napus HOM05D007716 ORTHO05D009780 6.6e-26 120.9 123 52.8
BolC3t18437H Brassica oleracea HOM05D007716 ORTHO05D009780 6.6e-26 120.9 123 52.8
A06p31220 Brassica napus HOM05D007716 ORTHO05D009780 1.1e-25 120.2 125 52.0
FAN27G0331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 1.1e-25 120.2 118 50.0
BraA06t26061Z Brassica rapa HOM05D007716 ORTHO05D009780 1.5e-25 119.8 125 50.4
AL8G41850 Arabidopsis lyrata HOM05D007716 ORTHO05D009780 3.3e-25 118.6 120 50.8
BcaC01g02685 Brassica carinata HOM05D007716 ORTHO05D009780 3.3e-25 118.6 123 52.0
Lj6g0015505 Lotus japonicus HOM05D007716 ORTHO05D009780 3.3e-25 118.6 120 48.3
SGA_v2.0_scaffold342G49411 Striga asiatica HOM05D007716 ORTHO05D009780 5.6e-25 117.9 120 47.5
AT5G64480 Arabidopsis thaliana HOM05D007716 ORTHO05D009780 1.2e-24 116.7 124 50.8
Sp2g27560 Schrenkiella parvula HOM05D007716 ORTHO05D009780 1.2e-24 116.7 124 51.6
Phvul.006G198900 Phaseolus vulgaris HOM05D007716 ORTHO05D009780 3.6e-24 115.2 118 48.3
Thhalv10004965m.g Eutrema salsugineum HOM05D007716 ORTHO05D009780 8.0e-24 114.0 128 49.2
CARHR278450 Cardamine hirsuta HOM05D007716 ORTHO05D009780 1.0e-23 113.6 122 47.5
AUR62043644 Chenopodium quinoa HOM05D007716 ORTHO05D009780 1.8e-23 112.8 131 44.3
AUR62027073 Chenopodium quinoa HOM05D007716 ORTHO05D009780 3.1e-23 112.1 131 44.3
MBI16_g17833_MAGBIO Magnolia biondii HOM05D007716 ORTHO05D009780 3.1e-23 112.1 102 50.0
Peaxi162Scf00299g00025 Petunia axillaris HOM05D007716 ORTHO05D009780 3.1e-23 112.1 65 81.5
Lalb_Chr20g0122741 Lupinus albus HOM05D007716 ORTHO05D009780 4.0e-23 111.7 122 45.1
VMungo0540G1513 Vigna mungo HOM05D007716 ORTHO05D009780 5.2e-23 111.3 118 46.6
Glyma.15G060900 Glycine max HOM05D007716 ORTHO05D009780 6.8e-23 110.9 118 44.9
ECA236G5147 Erigeron canadensis HOM05D007716 ORTHO05D009780 8.9e-23 110.5 108 48.1
Sed0024047 Sechium edule HOM05D007716 ORTHO05D009780 8.9e-23 110.5 116 47.4
unitig_61.g26045 Utricularia gibba HOM05D007716 ORTHO05D009780 1.5e-22 109.8 117 46.2
Carub.0008s2527 Capsella rubella HOM05D007716 ORTHO05D009780 4.4e-22 108.2 124 45.2
Ah.01g024230 Amaranthus hybridus HOM05D007716 ORTHO05D009780 5.8e-22 107.8 127 42.5
Glyma.13G254000 Glycine max HOM05D007716 ORTHO05D009780 1.3e-21 106.7 118 43.2
TPR.G32644 Trifolium pratense HOM05D007716 ORTHO05D009780 1.3e-21 106.7 120 45.8
DCAR_029284 Daucus carota HOM05D007716 ORTHO05D009780 2.9e-21 105.5 127 42.5
CsaV3_4G014630 Cucumis sativus L. HOM05D007716 ORTHO05D009780 1.1e-20 103.6 95 55.8
Eucgr.I02564 Eucalyptus grandis HOM05D007716 ORTHO05D009780 1.9e-20 102.8 118 45.8
Psat1g212560 Pisum sativum HOM05D007716 ORTHO05D009780 2.4e-20 102.4 117 45.3
Ca_00186_v3 Cicer arietinum L. HOM05D007716 ORTHO05D009780 1.2e-19 100.1 119 43.7
Aa31LG1G17430 Aethionema arabicum HOM05D007716 ORTHO05D009780 2.0e-19 99.4 126 41.3
Sc14g0003580 Simmondsia chinensis HOM05D007716 ORTHO05D009780 2.7e-19 99.0 119 43.7
Medtr2g010200 Medicago truncatula HOM05D007716 ORTHO05D009780 3.5e-19 98.6 107 43.9
Dinv08960 Davidia involucrata HOM05D007716 ORTHO05D009780 7.8e-19 97.4 68 64.7
Actinidia02415 Actinidia chinensis HOM05D007716 ORTHO05D009780 1.0e-18 97.1 80 61.2
arahy.Tifrunner.gnm1.ann1.1SXR49 Arachis hypogaea HOM05D007716 ORTHO05D009780 1.0e-18 97.1 103 42.7
arahy.Tifrunner.gnm1.ann1.84YYIV Arachis hypogaea HOM05D007716 ORTHO05D009780 1.0e-18 97.1 103 42.7
ATR0767G063 Amborella trichopoda HOM05D007716 ORTHO05D009780 1.1e-15 87.0 108 39.8
Lj9P341T42 Lonicera japonica HOM05D007716 ORTHO05D009780 2.3e-15 85.9 70 55.7
CDE04G3440 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 1.5e-14 83.2 97 40.2
Eucgr.I02552 Eucalyptus grandis HOM05D007716 ORTHO05D009780 2.0e-14 82.8 106 40.6
Actinidia23910 Actinidia chinensis HOM05D001242 ORTHO05D001089 1.0e-10 70.5 49 65.3
TAR376G1104 Trochodendron aralioides HOM05D007716 ORTHO05D009780 1.7e-10 69.7 63 57.1
ATR0144G021 Amborella trichopoda HOM05D007716 ORTHO05D009780 4.0e-07 58.5 63 41.3


User provided reference genes

Program Settings