Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010337g0020 Nicotiana tabacum HOM05D003120 ORTHO05D003568 4.1e-72 275.0 184 100.0
Peaxi162Scf00524g00083 Petunia axillaris HOM05D003120 ORTHO05D003568 6.1e-31 138.3 239 40.2
Nitab4.5_0000210g0170 Nicotiana tabacum HOM05D003120 ORTHO05D003568 2.3e-30 136.3 140 55.7
Nitab4.5_0001521g0040 Nicotiana tabacum HOM05D003120 ORTHO05D003568 3.9e-30 135.6 186 46.2
Nitab4.5_0000179g0020 Nicotiana tabacum HOM05D003120 ORTHO05D003568 1.9e-29 133.3 220 44.1
Peaxi162Scf00085g00199 Petunia axillaris HOM05D003120 ORTHO05D003568 3.3e-29 132.5 239 38.9
Peaxi162Scf00250g00511 Petunia axillaris HOM05D003120 ORTHO05D003568 3.3e-29 132.5 239 38.9
Nitab4.5_0004405g0030 Nicotiana tabacum HOM05D003120 ORTHO05D003568 4.3e-29 132.1 192 66.7
Peaxi162Scf02251g00003 Petunia axillaris HOM05D003120 ORTHO05D003568 5.7e-29 131.7 109 60.6
Nitab4.5_0008225g0020 Nicotiana tabacum HOM05D003120 ORTHO05D003568 1.8e-27 126.7 80 73.8
Peaxi162Scf00091g00169 Petunia axillaris HOM05D003120 ORTHO05D003568 2.4e-27 126.3 210 40.0
Nitab4.5_0002137g0170 Nicotiana tabacum HOM05D003120 ORTHO05D003568 3.1e-27 125.9 79 74.7
Nitab4.5_0006444g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 1.2e-26 124.0 210 40.0
Nitab4.5_0002038g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 1.5e-26 123.6 234 38.0
Nitab4.5_0000066g0180 Nicotiana tabacum HOM05D003120 ORTHO05D003568 4.5e-26 122.1 204 40.2
Peaxi162Scf01480g00009 Petunia axillaris HOM05D003120 ORTHO05D003568 6.5e-25 118.2 207 40.1
Nitab4.5_0000433g0100 Nicotiana tabacum HOM05D003120 ORTHO05D003568 8.5e-25 117.9 110 59.1
Nitab4.5_0003305g0030 Nicotiana tabacum HOM05D003120 ORTHO05D003568 1.9e-24 116.7 109 57.8
Nitab4.5_0000179g0050 Nicotiana tabacum HOM05D003120 ORTHO05D003568 2.3e-22 109.8 205 37.6
Nitab4.5_0001701g0120 Nicotiana tabacum HOM05D003120 ORTHO05D003568 3.9e-22 109.0 171 40.9
Peaxi162Scf00041g00711 Petunia axillaris HOM05D003120 ORTHO05D003568 3.9e-22 109.0 197 39.1
PGSC0003DMG402013972 Solanum tuberosum HOM05D003120 ORTHO05D003568 1.1e-21 107.5 169 44.4
Peaxi162Scf00287g00413 Petunia axillaris HOM05D003120 ORTHO05D003568 2.5e-21 106.3 208 37.5
Nitab4.5_0001836g0050 Nicotiana tabacum HOM05D003120 ORTHO05D003568 3.3e-21 105.9 108 52.8
Peaxi162Scf00010g00918 Petunia axillaris HOM05D003120 ORTHO05D003568 3.3e-21 105.9 236 35.2
Nitab4.5_0000892g0160 Nicotiana tabacum HOM05D003120 ORTHO05D003568 4.3e-21 105.5 82 59.8
Peaxi162Scf00473g00101 Petunia axillaris HOM05D003120 ORTHO05D003568 4.3e-21 105.5 121 49.6
Peaxi162Scf00005g02812 Petunia axillaris HOM05D003120 ORTHO05D003568 9.7e-21 104.4 238 34.9
Peaxi162Scf00634g00413 Petunia axillaris HOM05D003120 ORTHO05D003568 1.7e-20 103.6 114 50.9
Nitab4.5_0006586g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 2.2e-20 103.2 82 58.5
Peaxi162Scf00878g00111 Petunia axillaris HOM05D003120 ORTHO05D003568 2.2e-20 103.2 81 59.3
Peaxi162Scf00296g00108 Petunia axillaris HOM05D003120 ORTHO05D003568 4.8e-20 102.1 114 50.9
Nitab4.5_0000008g0220 Nicotiana tabacum HOM05D003120 ORTHO05D003568 6.3e-20 101.7 120 51.7
Peaxi162Scf00436g00007 Petunia axillaris HOM05D003120 ORTHO05D003568 6.3e-20 101.7 208 37.5
Sopen10g018180 Solanum pennellii HOM05D003120 ORTHO05D000001 8.2e-20 101.3 80 60.0
Nitab4.5_0011072g0030 Nicotiana tabacum HOM05D003120 ORTHO05D003568 1.1e-19 100.9 108 51.9
Nitab4.5_0013571g0020 Nicotiana tabacum HOM05D003120 ORTHO05D003568 1.4e-19 100.5 117 49.6
Peaxi162Scf00009g00715 Petunia axillaris HOM05D003120 ORTHO05D003568 1.8e-19 100.1 107 50.5
Nitab4.5_0000248g0040 Nicotiana tabacum HOM05D003120 ORTHO05D003568 2.4e-19 99.8 208 38.0
Nitab4.5_0023971g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 4.1e-19 99.0 80 65.0
Peaxi162Scf00941g00044 Petunia axillaris HOM05D003120 ORTHO05D003568 5.3e-19 98.6 108 50.9
Nitab4.5_0002287g0030 Nicotiana tabacum HOM05D003120 ORTHO05D003568 1.5e-18 97.1 82 56.1
Sopen01g033440 Solanum pennellii HOM05D003120 ORTHO05D003568 7.7e-18 94.7 115 46.1
Peaxi162Scf00311g00619 Petunia axillaris HOM05D003120 ORTHO05D003568 2.2e-17 93.2 145 43.4
Nitab4.5_0002512g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 2.9e-17 92.8 143 41.3
Peaxi162Scf00381g00218 Petunia axillaris HOM05D003120 ORTHO05D003568 5.0e-17 92.0 207 35.7
TWI18G1095 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 8.5e-17 91.3 82 52.4
TWI36G1730 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 1.9e-16 90.1 82 51.2
TWI73G1228 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 2.5e-16 89.7 82 51.2
TWI59G0531 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 4.2e-16 89.0 82 52.4
Peaxi162Scf00091g01210 Petunia axillaris HOM05D003120 ORTHO05D003568 7.2e-16 88.2 92 54.3
CAN.G585.2 Capsicum annuum HOM05D003120 ORTHO05D003568 1.6e-15 87.0 149 41.6
Nitab4.5_0002177g0060 Nicotiana tabacum HOM05D003120 ORTHO05D003568 2.1e-15 86.7 134 41.8
Nitab4.5_0011208g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 2.1e-15 86.7 78 57.7
Nitab4.5_0000196g0050 Nicotiana tabacum HOM05D003120 ORTHO05D003568 2.7e-15 86.3 182 38.5
Nitab4.5_0001130g0180 Nicotiana tabacum HOM05D003120 ORTHO05D003568 1.8e-14 83.6 109 47.7
Peaxi162Scf01079g00217 Petunia axillaris HOM05D003120 ORTHO05D003568 1.8e-14 83.6 207 34.8
Nitab4.5_0006391g0050 Nicotiana tabacum HOM05D003120 ORTHO05D003568 3.9e-14 82.4 57 71.9
Peaxi162Scf00167g00047 Petunia axillaris HOM05D003120 ORTHO05D003568 5.1e-14 82.0 208 34.1
Nitab4.5_0000444g0180 Nicotiana tabacum HOM05D003120 ORTHO05D003568 1.5e-13 80.5 148 38.5
Nitab4.5_0000417g0130 Nicotiana tabacum HOM05D003120 ORTHO05D003568 7.4e-13 78.2 166 38.0
Nitab4.5_0005809g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 9.7e-13 77.8 122 42.6
Peaxi162Scf00131g00120 Petunia axillaris HOM05D003120 ORTHO05D003568 9.7e-13 77.8 203 33.5
Nitab4.5_0006729g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 2.2e-12 76.6 81 50.6
Nitab4.5_0008143g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 1.1e-11 74.3 48 77.1
Nitab4.5_0000127g0150 Nicotiana tabacum HOM05D003120 ORTHO05D003568 1.8e-11 73.6 114 41.2
Peaxi162Scf00830g00027 Petunia axillaris HOM05D003120 ORTHO05D003568 1.8e-11 73.6 85 48.2
Peaxi162Scf00046g00248 Petunia axillaris HOM05D003120 ORTHO05D003568 4.1e-11 72.4 203 32.0
Nitab4.5_0002180g0020 Nicotiana tabacum HOM05D003120 ORTHO05D003568 7.0e-11 71.6 80 50.0
TPR.G36323 Trifolium pratense HOM05D008291 ORTHO05D003568 7.0e-11 71.6 69 42.0
Cfa009670 Carpinus fangiana HOM05D003120 ORTHO05D003568 9.1e-11 71.2 76 40.8
Nitab4.5_0000320g0020 Nicotiana tabacum HOM05D003120 ORTHO05D003568 9.1e-11 71.2 41 75.6
Peaxi162Scf00063g00114 Petunia axillaris HOM05D003120 ORTHO05D003568 1.6e-10 70.5 122 41.8
Haze_23034 Corylus avellana HOM05D003120 ORTHO05D003568 2.0e-10 70.1 89 39.3
Peaxi162Scf00373g00084 Petunia axillaris HOM05D003120 ORTHO05D003568 2.6e-10 69.7 154 33.8
Nitab4.5_0000587g0080 Nicotiana tabacum HOM05D003120 ORTHO05D003568 4.5e-10 68.9 155 36.1
CiPaw.14G126400 Carya illinoinensis HOM05D003120 ORTHO05D003568 7.7e-10 68.2 89 38.2
Ca_17856_v3 Cicer arietinum L. HOM05D008291 ORTHO05D003568 1.0e-09 67.8 76 40.8
QL93p0093_0054 Quercus lobata HOM05D003120 ORTHO05D003568 1.0e-09 67.8 89 38.2
CAN.G48.24 Capsicum annuum HOM05D003120 ORTHO05D003568 3.8e-09 65.9 49 57.1
TPR.G6754 Trifolium pratense HOM05D008291 ORTHO05D003568 5.0e-09 65.5 73 39.7
Lj1g0021760 Lotus japonicus HOM05D008291 ORTHO05D003568 6.5e-09 65.1 73 38.4
Phvul.002G246000 Phaseolus vulgaris HOM05D008291 ORTHO05D003568 6.5e-09 65.1 77 35.1
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 6.5e-09 65.1 75 36.0
Nitab4.5_0004491g0020 Nicotiana tabacum HOM05D003120 ORTHO05D003568 8.5e-09 64.7 155 36.1
VMungo0251G2604 Vigna mungo HOM05D008291 ORTHO05D003568 8.5e-09 64.7 77 35.1
Nitab4.5_0007680g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 1.1e-08 64.3 64 56.2
Haze_23033 Corylus avellana HOM05D003120 ORTHO05D003568 1.5e-08 63.9 84 36.9
Sopen10g007560 Solanum pennellii HOM05D008291 ORTHO05D016169 1.5e-08 63.9 74 39.2
CAN.G480.6 Capsicum annuum HOM05D003120 ORTHO05D003568 1.9e-08 63.5 98 40.8
AUR62035501 Chenopodium quinoa HOM05D008595 ORTHO05D010945 1.9e-08 63.5 81 43.2
Lj4g0027394 Lotus japonicus HOM05D008291 ORTHO05D003568 1.9e-08 63.5 76 36.8
Nitab4.5_0000765g0020 Nicotiana tabacum HOM05D003120 ORTHO05D003568 4.2e-08 62.4 164 36.6
Solyc12g038430.3 Solanum lycopersicum HOM05D008291 ORTHO05D012653 5.5e-08 62.0 74 37.8
TWI73G0990 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 7.2e-08 61.6 75 34.7
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.4e-08 61.2 79 41.8
CAN.G50.3 Capsicum annuum HOM05D003120 ORTHO05D003568 1.2e-07 60.8 138 36.2
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-07 60.8 122 33.6
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-07 60.5 78 38.5
AUR62040876 Chenopodium quinoa HOM05D008595 ORTHO05D010945 2.1e-07 60.1 81 43.2
Glyma.08G123400 Glycine max HOM05D008291 ORTHO05D000669 2.1e-07 60.1 76 32.9
MBI06_g39196_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.1e-07 60.1 79 41.8
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 2.1e-07 60.1 79 40.5
MBI19_g12820_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.6e-07 59.3 79 40.5
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.7e-07 58.9 108 35.2
TWI31G0781 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 4.7e-07 58.9 82 40.2
TAR629G2892 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.7e-07 58.9 91 35.2
CAN.G706.1 Capsicum annuum HOM05D003120 ORTHO05D003568 6.1e-07 58.5 45 60.0
Glyma.05G165700 Glycine max HOM05D008291 ORTHO05D000669 6.1e-07 58.5 82 30.5
Nitab4.5_0005834g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 6.1e-07 58.5 78 46.2
Sopen09g001250 Solanum pennellii HOM05D008291 ORTHO05D000669 6.1e-07 58.5 128 28.1
MBI14_g03113_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.0e-06 57.8 81 38.3
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-06 57.4 82 40.2
Peaxi162Scf00100g00912 Petunia axillaris HOM05D003120 ORTHO05D003568 1.8e-06 57.0 69 43.5
Peaxi162Scf00204g01521 Petunia axillaris HOM05D003120 ORTHO05D003568 1.8e-06 57.0 160 31.9
Solyc09g005280.3 Solanum lycopersicum HOM05D008291 ORTHO05D000669 1.8e-06 57.0 128 28.1
Nitab4.5_0021261g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 2.3e-06 56.6 140 34.3
Sopen09g022380 Solanum pennellii HOM05D008291 ORTHO05D000669 2.3e-06 56.6 82 32.9
MBI14_g03116_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.0e-06 55.8 75 42.7
Peaxi162Scf00005g03215 Petunia axillaris HOM05D003120 ORTHO05D003568 4.0e-06 55.8 149 32.2
Peaxi162Scf00085g00098 Petunia axillaris HOM05D003120 ORTHO05D003568 4.0e-06 55.8 163 31.3
Nitab4.5_0002032g0030 Nicotiana tabacum HOM05D003120 ORTHO05D003568 5.2e-06 55.5 64 48.4
arahy.Tifrunner.gnm1.ann1.EW3BSR Arachis hypogaea HOM05D008291 ORTHO05D000669 6.7e-06 55.1 130 28.5
arahy.Tifrunner.gnm1.ann1.TSWN09 Arachis hypogaea HOM05D008291 ORTHO05D000669 6.7e-06 55.1 130 28.5
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 6.7e-06 55.1 79 39.2
Sopen05g010220 Solanum pennellii HOM05D008291 ORTHO05D012653 6.7e-06 55.1 129 27.9
EL10Ac1g01494 Beta vulgaris HOM05D008595 ORTHO05D010945 8.8e-06 54.7 99 37.4
AUR62043239 Chenopodium quinoa HOM05D003120 ORTHO05D003568 8.8e-06 54.7 82 40.2
Nitab4.5_0000176g0070 Nicotiana tabacum HOM05D003120 ORTHO05D003568 8.8e-06 54.7 32 75.0


User provided reference genes

Program Settings