Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010333g0120 Nicotiana tabacum HOM05D007533 ORTHO05D009622 2.6e-65 251.9 126 100.0
Sopen00g001050 Solanum pennellii HOM05D007533 ORTHO05D009622 4.7e-35 151.4 80 93.8
Solyc00g500302.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 6.2e-35 151.0 79 94.9
Solyc11g063573.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 6.2e-35 151.0 79 94.9
Nitab4.5_0012599g0080 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.4e-34 149.8 79 94.9
Solyc00g500173.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 4.0e-34 148.3 79 93.7
CAN.G2446.3 Capsicum annuum HOM05D007533 ORTHO05D009622 8.9e-34 147.1 79 93.7
CAN.G2792.1 Capsicum annuum HOM05D007533 ORTHO05D009622 8.9e-34 147.1 79 93.7
PGSC0003DMG400026520 Solanum tuberosum HOM05D007533 ORTHO05D009622 1.2e-33 146.7 79 93.7
Nitab4.5_0010333g0060 Nicotiana tabacum HOM05D007533 ORTHO05D009622 2.6e-33 145.6 79 91.1
Nitab4.5_0010033g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.4e-31 139.8 79 89.9
PGSC0003DMG400030942 Solanum tuberosum HOM05D007533 ORTHO05D009622 1.4e-31 139.8 79 86.1
CAN.G1001.31 Capsicum annuum HOM05D007533 ORTHO05D009622 2.4e-31 139.0 79 88.6
Peaxi162Scf00651g00636 Petunia axillaris HOM05D007533 ORTHO05D009622 2.4e-31 139.0 79 87.3
Nitab4.5_0000172g1940 Nicotiana tabacum HOM05D007533 ORTHO05D009622 4.1e-31 138.3 111 68.5
LjContig00439g0010342 Lotus japonicus HOM05D007533 ORTHO05D009622 2.5e-28 129.0 79 78.5
LjContig00439g0021951 Lotus japonicus HOM05D007533 ORTHO05D009622 2.5e-28 129.0 79 78.5
Glyma.17G185600 Glycine max HOM05D007533 ORTHO05D009622 3.3e-28 128.6 79 78.5
Lalb_Chr00c21g0405841 Lupinus albus HOM05D007533 ORTHO05D009622 5.6e-28 127.9 79 78.5
Lalb_Chr00c24g0407011 Lupinus albus HOM05D007533 ORTHO05D009622 5.6e-28 127.9 79 78.5
ATMG00640 Arabidopsis thaliana HOM05D007533 ORTHO05D009622 1.6e-27 126.3 80 80.0
TPR.G21214 Trifolium pratense HOM05D007533 ORTHO05D009622 4.7e-27 124.8 79 77.2
Thhalv10023156m.g Eutrema salsugineum HOM05D007533 ORTHO05D009622 6.2e-27 124.4 80 78.8
AL9U10720 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 1.4e-26 123.2 80 77.5
arahy.Tifrunner.gnm1.ann1.6ILC2A Arachis hypogaea HOM05D007533 ORTHO05D009622 1.5e-25 119.8 87 67.8
arahy.Tifrunner.gnm1.ann1.R8TWAM Arachis hypogaea HOM05D007533 ORTHO05D009622 1.5e-25 119.8 87 67.8
CARHR283000 Cardamine hirsuta HOM05D007533 ORTHO05D009622 3.4e-25 118.6 80 76.2
Nitab4.5_0000172g2020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 3.4e-25 118.6 152 51.3
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 1.7e-24 116.3 77 77.9
CANSAT16G0029 Cannabis sativa HOM05D007533 ORTHO05D009622 2.2e-24 115.9 79 74.7
Gorai.001G167400 Gossypium raimondii HOM05D007533 ORTHO05D009622 2.2e-24 115.9 79 74.7
Lj2P1223T74 Lonicera japonica HOM05D007533 ORTHO05D009622 2.9e-24 115.5 79 74.7
Lj2P1228T84 Lonicera japonica HOM05D007533 ORTHO05D009622 2.9e-24 115.5 79 74.7
Lj2P1231T101 Lonicera japonica HOM05D007533 ORTHO05D009622 2.9e-24 115.5 79 74.7
Nn1g09978 Nelumbo nucifera HOM05D007533 ORTHO05D009622 4.9e-24 114.8 78 75.6
Nn1g10040 Nelumbo nucifera HOM05D007533 ORTHO05D009622 4.9e-24 114.8 78 75.6
A04p09330 Brassica napus HOM05D007533 ORTHO05D009622 6.4e-24 114.4 77 76.6
BolSC28t60309H Brassica oleracea HOM05D007533 ORTHO05D009622 6.4e-24 114.4 77 76.6
BolSC28t60365H Brassica oleracea HOM05D007533 ORTHO05D009622 6.4e-24 114.4 77 76.6
BraSC48t46232Z Brassica rapa HOM05D007533 ORTHO05D009622 6.4e-24 114.4 77 76.6
BraSC48t46320Z Brassica rapa HOM05D007533 ORTHO05D009622 6.4e-24 114.4 77 76.6
Hma1.2p1_0136F.1_g062009 Hydrangea macrophylla HOM05D007533 ORTHO05D009622 1.9e-23 112.8 79 73.4
Aqoxy23s008 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 2.4e-23 112.5 78 74.4
DCAR_032459 Daucus carota HOM05D007533 ORTHO05D009622 3.2e-23 112.1 79 73.4
Sed0020832 Sechium edule HOM05D007533 ORTHO05D009622 4.2e-23 111.7 79 73.4
Aqoxy1G02967 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 7.1e-23 110.9 78 73.1
Ah.02g111570 Amaranthus hybridus HOM05D007533 ORTHO05D009622 1.2e-22 110.2 79 72.2
Ah.10g028150 Amaranthus hybridus HOM05D007533 ORTHO05D009622 1.2e-22 110.2 79 72.2
Potri.007G061641 Populus trichocarpa HOM05D007533 ORTHO05D009622 1.2e-22 110.2 79 70.9
Potri.007G062602 Populus trichocarpa HOM05D007533 ORTHO05D009622 1.2e-22 110.2 79 70.9
RcHm_v2.0_MTg0498351 Rosa chinensis HOM05D007533 ORTHO05D009622 1.2e-22 110.2 78 71.8
SabraMtG0004200 Salix brachista HOM05D007533 ORTHO05D009622 1.2e-22 110.2 79 70.9
C01p34790 Brassica napus HOM05D007533 ORTHO05D009622 2.7e-22 109.0 77 72.7
Lsat_1_v5_gn_0_35060 Lactuca sativa HOM05D007533 ORTHO05D009622 4.6e-22 108.2 79 72.2
AUR62042328 Chenopodium quinoa HOM05D007533 ORTHO05D009622 6.0e-22 107.8 79 70.9
MSTRG.26054 Avicennia marina HOM05D007533 ORTHO05D009622 7.8e-22 107.5 79 69.6
CsaV3_UNG210000 Cucumis sativus L. HOM05D007533 ORTHO05D009622 1.7e-21 106.3 79 70.9
HanXRQChr16g0504431 Helianthus annuus HOM05D007533 ORTHO05D009622 2.3e-21 105.9 79 70.9
HanXRQChr17g0567331 Helianthus annuus HOM05D007533 ORTHO05D009622 2.3e-21 105.9 79 70.9
HanXRQMTg0579131 Helianthus annuus HOM05D007533 ORTHO05D009622 2.3e-21 105.9 79 70.9
MBI05_g05359_MAGBIO Magnolia biondii HOM05D007533 ORTHO05D009622 3.9e-21 105.1 73 72.6
HanXRQChr09g0253411 Helianthus annuus HOM05D007533 ORTHO05D009622 1.9e-20 102.8 79 69.6
QL12p027939 Quercus lobata HOM05D007533 ORTHO05D009622 4.3e-20 101.7 70 70.0
unitig_87.g27950 Utricularia gibba HOM05D007533 ORTHO05D009622 2.8e-19 99.0 96 58.3
Lsat_1_v5_gn_1_118900 Lactuca sativa HOM05D007533 ORTHO05D009622 1.8e-18 96.3 73 67.1
Nitab4.5_0000034g0140 Nicotiana tabacum HOM05D007533 ORTHO05D009622 2.4e-18 95.9 51 92.2
SHI19535 Sapria himalayana HOM05D000105 ORTHO05D000023 2.4e-18 95.9 76 65.8
Gohir.D01G116666 Gossypium hirsutum HOM05D007533 ORTHO05D009622 9.0e-18 94.0 65 69.2
Solyc06g042990.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 1.2e-17 93.6 68 67.6
ATR0155G001 Amborella trichopoda HOM05D007533 ORTHO05D009622 2.0e-17 92.8 62 72.6
Dinv06666 Davidia involucrata HOM05D007533 ORTHO05D009622 2.0e-17 92.8 63 69.8
Peaxi162Scf01098g00002 Petunia axillaris HOM05D007533 ORTHO05D009622 3.4e-17 92.0 47 93.6
Lj2P1226T70 Lonicera japonica HOM05D007533 ORTHO05D009622 1.3e-16 90.1 56 76.8
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 4.2e-15 85.1 49 81.6
arahy.Tifrunner.gnm1.ann1.PN90EB Arachis hypogaea HOM05D007533 ORTHO05D009622 4.2e-15 85.1 49 81.6
Oeu041867.1 Olea europaea HOM05D007533 ORTHO05D009622 1.6e-14 83.2 47 83.0
SalBow1G6690 Salvia bowleyana HOM05D007533 ORTHO05D009622 2.7e-14 82.4 48 79.2
Aa31csc1168G30 Aethionema arabicum HOM05D007533 ORTHO05D009622 4.6e-14 81.6 50 78.0
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 4.6e-14 81.6 59 67.8
Aqoxy12s024 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 1.3e-13 80.1 41 92.7
CARHR288330 Cardamine hirsuta HOM05D007533 ORTHO05D009622 3.0e-13 79.0 45 84.4
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 3.0e-13 79.0 42 88.1
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 3.0e-13 79.0 42 88.1
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 1.1e-12 77.0 59 66.1
CDE02G4305 Ceratophyllum demersum HOM05D007533 ORTHO05D009622 2.5e-12 75.9 48 77.1
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 7.4e-12 74.3 46 76.1


User provided reference genes

Program Settings