Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010333g0110 Nicotiana tabacum HOM05D011968 ORTHO05D014241 1.3e-125 453.0 219 100.0
Nitab4.5_0013560g0040 Nicotiana tabacum HOM05D011968 ORTHO05D014241 1.4e-87 326.6 182 89.0
Nitab4.5_0000866g0220 Nicotiana tabacum HOM05D011968 ORTHO05D014241 5.6e-68 261.5 152 86.2
Nitab4.5_0005831g0080 Nicotiana tabacum HOM05D011968 ORTHO05D014241 4.8e-67 258.5 200 70.5
Nitab4.5_0004300g0080 Nicotiana tabacum HOM05D011968 ORTHO05D014241 1.0e-61 240.7 164 75.6
Nitab4.5_0002093g0160 Nicotiana tabacum HOM05D011968 ORTHO05D014241 1.0e-56 224.2 187 64.2
Nitab4.5_0000085g0170 Nicotiana tabacum HOM05D011968 ORTHO05D014241 2.9e-48 196.1 189 60.3
Nitab4.5_0012599g0070 Nicotiana tabacum HOM05D011968 ORTHO05D014241 1.9e-47 193.4 107 88.8
Nitab4.5_0010586g0020 Nicotiana tabacum HOM05D011968 ORTHO05D014241 2.3e-29 133.3 93 74.2
Nitab4.5_0000844g0150 Nicotiana tabacum HOM05D011968 ORTHO05D014241 1.6e-22 110.5 130 49.2
MBI05_g05343_MAGBIO Magnolia biondii HOM05D000445 ORTHO05D000314 8.3e-19 98.2 155 40.0
CAN.G1167.16 Capsicum annuum HOM05D002660 ORTHO05D003902 9.1e-18 94.7 134 44.0
CAN.G85.19 Capsicum annuum HOM05D002660 ORTHO05D003902 9.1e-18 94.7 137 45.3
Lalb_Chr00c24g0406851 Lupinus albus HOM05D002660 ORTHO05D003902 1.2e-17 94.4 119 43.7
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 4.5e-17 92.4 134 45.5
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 4.5e-17 92.4 134 45.5
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 4.5e-17 92.4 134 45.5
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 4.5e-17 92.4 134 45.5
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 4.5e-17 92.4 134 45.5
Sopen11g018230 Solanum pennellii HOM05D002660 ORTHO05D003902 4.5e-17 92.4 134 43.3
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 4.5e-17 92.4 134 45.5
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 5.9e-17 92.0 141 42.6
Solyc00g142170.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 7.7e-17 91.7 137 44.5
PGSC0003DMG400001137 Solanum tuberosum HOM05D002660 ORTHO05D003902 1.0e-16 91.3 134 43.3
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 3.8e-16 89.4 157 38.9
Solyc00g500255.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.8e-16 89.4 134 44.0
CAN.G1109.11 Capsicum annuum HOM05D002660 ORTHO05D003902 6.5e-16 88.6 134 41.8
MBI03_g45449_MAGBIO Magnolia biondii HOM05D017124 ORTHO05D017284 6.5e-16 88.6 97 54.6
Nitab4.5_0000819g0040 Nicotiana tabacum HOM05D002921 ORTHO05D003258 6.5e-16 88.6 54 75.9
Solyc03g063470.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.1e-15 87.8 137 43.8
MBI14_g38258_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 4.2e-15 85.9 120 42.5
BNapus_Darmor_BZH_scaffold_234p00270 Brassica napus HOM05D002660 ORTHO05D003902 3.6e-14 82.8 173 37.0
BolSC28t60340H Brassica oleracea HOM05D002660 ORTHO05D003902 3.6e-14 82.8 173 37.0
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 3.6e-14 82.8 137 39.4
BcaC05g26896 Brassica carinata HOM05D002660 ORTHO05D003902 4.7e-14 82.4 173 37.0
BcaC08g43707 Brassica carinata HOM05D002660 ORTHO05D003902 4.7e-14 82.4 173 37.0
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 8.0e-14 81.6 121 43.0
CAN.G26.9 Capsicum annuum HOM05D002660 ORTHO05D003902 1.4e-13 80.9 134 40.3
Lj2P1228T81 Lonicera japonica HOM05D011380 ORTHO05D019448 3.0e-13 79.7 48 85.4
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 3.0e-13 79.7 130 41.5
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 4.0e-13 79.3 126 38.9
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 4.0e-13 79.3 126 38.9
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 4.0e-13 79.3 126 38.9
ATMG01410 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 6.8e-13 78.6 126 35.7
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 6.8e-13 78.6 126 38.9
CAN.G999.39 Capsicum annuum HOM05D002660 ORTHO05D003902 6.8e-13 78.6 119 41.2
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 8.8e-13 78.2 132 39.4
MBI05_g23324_MAGBIO Magnolia biondii HOM05D017124 ORTHO05D017284 2.0e-12 77.0 47 78.7
MBI14_g38259_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D010725 2.6e-12 76.6 111 40.5
COL.COLO4_02507 Corchorus olitorius HOM05D002660 ORTHO05D003902 3.4e-12 76.3 115 37.4
SGA_v2.0_scaffold420G51340 Striga asiatica HOM05D002660 ORTHO05D003902 3.4e-12 76.3 136 38.2
ATMG01110 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 4.4e-12 75.9 133 37.6
CARHR283370 Cardamine hirsuta HOM05D002660 ORTHO05D003902 4.4e-12 75.9 133 39.1
Glyma.12G175100 Glycine max HOM05D002660 ORTHO05D003902 7.5e-12 75.1 113 41.6
CAN.G72.10 Capsicum annuum HOM05D002660 ORTHO05D003902 9.8e-12 74.7 126 37.3
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 9.8e-12 74.7 153 36.6
Nitab4.5_0010333g0140 Nicotiana tabacum HOM05D011968 ORTHO05D014241 3.7e-11 72.8 33 93.9
RcHm_v2.0_MTg0498601 Rosa chinensis HOM05D002660 ORTHO05D003902 3.7e-11 72.8 131 36.6
CAN.G85.22 Capsicum annuum HOM05D002660 ORTHO05D003902 4.9e-11 72.4 126 38.1
Lsat_1_v5_gn_5_13340 Lactuca sativa HOM05D002660 ORTHO05D003902 4.9e-11 72.4 120 35.0
Lsat_1_v5_gn_5_172580 Lactuca sativa HOM05D002660 ORTHO05D003902 4.9e-11 72.4 120 35.0
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 4.9e-11 72.4 204 31.9
MBI05_g05346_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 6.3e-11 72.0 168 31.5
TAR626G0574 Trochodendron aralioides HOM05D002660 ORTHO05D003902 1.8e-10 70.5 123 35.8
AT2G07749 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 2.4e-10 70.1 124 37.1
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 5.4e-10 68.9 134 38.1
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 5.4e-10 68.9 134 38.1
SGA_v2.0_scaffold479G52276 Striga asiatica HOM05D002660 ORTHO05D003902 9.2e-10 68.2 112 39.3
Sed0024408 Sechium edule HOM05D002660 ORTHO05D003902 2.0e-09 67.0 49 57.1
Sed0020463 Sechium edule HOM05D002660 ORTHO05D003902 2.7e-09 66.6 130 38.5
Dinv06680 Davidia involucrata HOM05D002660 ORTHO05D011644 3.5e-09 66.2 45 62.2
Nn1g10174 Nelumbo nucifera HOM05D011968 ORTHO05D014241 3.5e-09 66.2 35 85.7
Nn2g13591 Nelumbo nucifera HOM05D011968 ORTHO05D014241 3.5e-09 66.2 35 85.7
CsaV3_UNG207980 Cucumis sativus L. HOM05D002660 ORTHO05D003902 5.9e-09 65.5 49 57.1
Hma1.2p1_1529F.1_g289140 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 5.9e-09 65.5 60 51.7
MBI05_g11249_MAGBIO Magnolia biondii HOM05D017124 ORTHO05D017284 5.9e-09 65.5 40 80.0
Cpa.g.sc263.18 Carica papaya HOM05D002660 ORTHO05D003902 1.7e-08 63.9 56 51.8
Hma1.2p1_1430F.1_g282940 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 1.7e-08 63.9 60 50.0
SGA_v2.0_scaffold400G50852 Striga asiatica HOM05D000388 ORTHO05D000473 1.7e-08 63.9 130 35.4
Peaxi162Scf00625g00034 Petunia axillaris HOM05D002660 ORTHO05D003902 8.6e-08 61.6 63 47.6
Glyma.08G300900 Glycine max HOM05D002660 ORTHO05D003902 1.1e-07 61.2 116 36.2
MBI14_g44090_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 1.1e-07 61.2 50 54.0
Nn1g10106 Nelumbo nucifera HOM05D002660 ORTHO05D003902 1.9e-07 60.5 138 31.9
Nn1g10197 Nelumbo nucifera HOM05D002660 ORTHO05D003902 1.9e-07 60.5 138 31.9
Oeu021479.1 Olea europaea HOM05D002660 ORTHO05D011706 4.3e-07 59.3 49 49.0
ATMG00490 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 5.6e-07 58.9 53 49.1
Sed0012925 Sechium edule HOM05D002660 ORTHO05D003902 5.6e-07 58.9 98 38.8
Solyc00g500104.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 5.6e-07 58.9 51 51.0
Solyc11g063540.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 5.6e-07 58.9 51 51.0
Sopen05g012620 Solanum pennellii HOM05D002660 ORTHO05D003902 5.6e-07 58.9 51 51.0
arahy.Tifrunner.gnm1.ann1.PK4DTL Arachis hypogaea HOM05D012916 ORTHO05D014365 7.3e-07 58.5 110 35.5
arahy.Tifrunner.gnm1.ann1.DD5JWP Arachis hypogaea HOM05D002660 ORTHO05D003902 9.5e-07 58.2 168 32.1
Nn1g09933 Nelumbo nucifera HOM05D002660 ORTHO05D003902 1.2e-06 57.8 103 35.9
Nn1g10009 Nelumbo nucifera HOM05D002660 ORTHO05D003902 1.2e-06 57.8 103 35.9
Cfa021334 Carpinus fangiana HOM05D002660 ORTHO05D003902 1.6e-06 57.4 99 35.4
Thhalv10003100m.g Eutrema salsugineum HOM05D002660 ORTHO05D003902 1.6e-06 57.4 49 51.0
SHI41394 Sapria himalayana HOM05D002660 ORTHO05D003902 2.1e-06 57.0 48 47.9
MBI06_g04141_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 2.8e-06 56.6 129 34.1
Nitab4.5_0012260g0040 Nicotiana tabacum HOM05D002660 ORTHO05D003902 2.8e-06 56.6 66 36.4
Solyc11g030860.3 Solanum lycopersicum HOM05D002660 ORTHO05D003902 8.0e-06 55.1 101 40.6


User provided reference genes

Program Settings