Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.2e-138 496.5 246 100.0
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 6.3e-84 314.7 246 71.1
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 8.6e-41 171.4 199 52.8
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 7.3e-40 168.3 230 47.8
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 4.7e-39 165.6 185 54.6
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 4.4e-37 159.1 170 55.3
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 2.2e-36 156.8 170 55.3
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 3.8e-36 156.0 202 49.0
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 1.1e-35 154.5 238 44.5
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 1.4e-35 154.1 245 43.7
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 5.4e-35 152.1 202 48.0
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 2.1e-34 150.2 209 46.9
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 3.5e-34 149.4 184 48.4
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 7.8e-34 148.3 186 48.9
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 1.0e-33 147.9 165 53.9
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 3.9e-33 146.0 254 43.3
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 3.9e-33 146.0 214 45.8
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 8.6e-33 144.8 208 46.6
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 1.1e-32 144.4 221 42.5
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 1.5e-32 144.1 243 42.4
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 1.5e-32 144.1 200 46.0
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 1.9e-32 143.7 220 44.5
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 2.5e-32 143.3 183 48.1
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 2.5e-32 143.3 183 47.5
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 2.5e-32 143.3 192 46.4
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 3.3e-32 142.9 186 47.8
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 4.3e-32 142.5 230 43.5
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 4.3e-32 142.5 202 46.0
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 9.6e-32 141.4 180 47.8
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 9.6e-32 141.4 209 44.5
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 9.6e-32 141.4 199 46.7
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 9.6e-32 141.4 165 50.9
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 1.2e-31 141.0 215 43.7
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 1.6e-31 140.6 180 48.3
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 1.6e-31 140.6 192 46.4
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 1.6e-31 140.6 236 42.4
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 2.1e-31 140.2 195 45.6
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 2.1e-31 140.2 195 45.6
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 2.8e-31 139.8 236 41.9
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 3.6e-31 139.4 186 47.8
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 4.7e-31 139.0 221 43.9
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 4.7e-31 139.0 215 42.8
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 4.7e-31 139.0 208 44.7
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 6.2e-31 138.7 228 42.5
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 6.2e-31 138.7 219 44.7
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 6.2e-31 138.7 209 45.5
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 8.1e-31 138.3 228 42.1
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 1.1e-30 137.9 242 42.6
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 1.1e-30 137.9 196 45.9
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 2.4e-30 136.7 180 47.2
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 2.4e-30 136.7 165 49.7
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 8.9e-30 134.8 240 42.9
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 2.6e-29 133.3 81 82.7
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 2.6e-29 133.3 81 82.7
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 2.6e-29 133.3 81 81.5
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 3.4e-29 132.9 197 44.7
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 5.8e-29 132.1 202 42.6
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 7.6e-29 131.7 107 67.3
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 1.3e-28 131.0 247 39.3
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 2.9e-28 129.8 167 46.1
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 4.9e-28 129.0 81 79.0
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 1.1e-27 127.9 107 62.6
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 1.4e-27 127.5 81 79.0
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 1.4e-27 127.5 81 77.8
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 1.4e-27 127.5 106 65.1
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.4e-27 127.5 81 77.8
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 1.9e-27 127.1 81 77.8
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 2.4e-27 126.7 81 79.0
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 2.4e-27 126.7 178 44.9
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 3.2e-27 126.3 81 77.8
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 3.2e-27 126.3 81 79.0
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 3.2e-27 126.3 81 75.3
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 4.2e-27 125.9 81 77.8
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 4.2e-27 125.9 166 44.0
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 7.1e-27 125.2 80 76.2
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 9.3e-27 124.8 81 77.8
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 9.3e-27 124.8 81 76.5
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 9.3e-27 124.8 81 76.5
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 9.3e-27 124.8 107 61.7
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 1.2e-26 124.4 81 75.3
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 1.2e-26 124.4 81 77.8
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 1.6e-26 124.0 81 77.8
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 1.6e-26 124.0 81 75.3
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 2.7e-26 123.2 81 76.5
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 2.7e-26 123.2 107 60.7
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 2.7e-26 123.2 107 62.6
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 3.5e-26 122.9 81 75.3
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 6.0e-26 122.1 81 76.5
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 6.0e-26 122.1 81 75.3
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 7.8e-26 121.7 81 74.1
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 7.8e-26 121.7 81 72.8
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 1.3e-25 120.9 240 38.8
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 1.7e-25 120.6 81 74.1
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 1.7e-25 120.6 81 74.1
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 5.6e-24 115.5 107 58.9
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 7.3e-24 115.2 107 59.8
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 2.1e-23 113.6 81 70.4
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 1.1e-22 111.3 107 56.1
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 1.5e-21 107.5 107 55.1
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 1.3e-20 104.4 165 40.0
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 3.2e-19 99.8 81 60.5
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 2.7e-18 96.7 107 48.6
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 6.0e-18 95.5 107 47.7
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 6.0e-18 95.5 81 56.8
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.3e-17 94.4 107 49.5
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 9.0e-14 81.6 71 59.2
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 7.6e-13 78.6 43 83.7
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 9.9e-13 78.2 43 83.7
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 1.1e-11 74.7 195 31.3
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 1.2e-10 71.2 153 38.6
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 3.5e-10 69.7 37 83.8
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.8e-09 67.4 132 37.9
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 3.9e-09 66.2 152 35.5
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 5.1e-09 65.9 227 29.1
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 4.0e-06 56.2 32 81.2
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 6.9e-06 55.5 53 56.6
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 6.9e-06 55.5 53 56.6


User provided reference genes

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