Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 1.0e-128 463.4 225 100.0
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 8.8e-117 423.7 251 85.7
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 1.3e-104 383.3 252 75.4
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 1.1e-103 380.2 252 75.4
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 1.5e-103 379.8 252 75.4
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 8.9e-101 370.5 252 75.4
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 7.5e-100 367.5 237 78.5
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 1.1e-74 283.9 252 57.9
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 7.1e-74 281.2 228 60.1
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 9.2e-74 280.8 239 58.6
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 3.5e-73 278.9 232 61.6
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 6.0e-73 278.1 243 59.7
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 7.3e-71 271.2 226 60.6
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 2.8e-70 269.2 251 55.8
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 6.2e-70 268.1 248 54.0
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 1.1e-69 267.3 245 56.3
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 5.8e-68 261.5 231 57.6
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 1.7e-67 260.0 237 57.0
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 1.7e-67 260.0 231 58.4
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 6.4e-67 258.1 241 55.2
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 3.2e-66 255.8 287 49.5
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 4.2e-66 255.4 241 55.2
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 1.2e-65 253.8 223 56.5
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 1.6e-65 253.4 251 53.4
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 6.6e-64 248.1 235 54.9
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 1.9e-63 246.5 231 54.5
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 2.5e-63 246.1 230 55.2
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 4.3e-63 245.4 243 51.9
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 1.3e-62 243.8 230 55.2
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 5.4e-58 228.4 261 49.0
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 9.3e-58 227.6 244 50.8
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 2.1e-57 226.5 210 56.2
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 2.1e-57 226.5 213 56.8
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 2.7e-57 226.1 209 55.5
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 7.9e-57 224.6 209 55.5
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 7.9e-57 224.6 226 52.2
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 1.3e-56 223.8 263 48.3
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 1.7e-56 223.4 210 54.3
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 1.7e-56 223.4 210 54.3
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 3.0e-56 222.6 244 51.6
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 3.0e-56 222.6 211 54.5
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 5.1e-56 221.9 209 53.1
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 5.1e-56 221.9 241 50.2
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 1.1e-55 220.7 216 56.0
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 1.6e-54 216.9 217 52.5
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 2.1e-54 216.5 205 53.7
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 2.8e-54 216.1 217 51.6
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 3.6e-54 215.7 221 51.1
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 1.8e-53 213.4 205 53.2
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 2.4e-53 213.0 239 48.5
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 9.0e-53 211.1 210 52.9
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 5.8e-52 208.4 245 47.3
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 2.2e-51 206.5 225 48.9
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 5.5e-50 201.8 219 52.1
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 2.7e-49 199.5 228 48.2
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 7.9e-49 198.0 250 42.8
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 2.3e-48 196.4 255 44.3
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 6.7e-48 194.9 260 42.3
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 4.3e-47 192.2 246 45.5
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 1.6e-46 190.3 224 47.8
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 3.7e-46 189.1 237 44.3
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 8.1e-46 188.0 225 46.2
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 8.1e-46 188.0 214 46.7
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 1.1e-45 187.6 227 46.7
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 1.8e-45 186.8 229 45.0
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 1.8e-45 186.8 251 42.2
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 3.1e-45 186.0 215 45.1
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 5.3e-45 185.3 215 45.1
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 9.0e-45 184.5 220 46.8
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 2.6e-44 183.0 225 45.8
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 4.5e-44 182.2 225 44.9
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 7.6e-44 181.4 212 44.8
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 1.0e-43 181.0 235 44.3
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 1.0e-43 181.0 226 46.0
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 1.3e-43 180.6 222 46.4
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 1.3e-43 180.6 222 46.4
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 1.3e-43 180.6 237 43.0
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 1.7e-43 180.3 235 45.5
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 4.9e-43 178.7 225 44.9
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 4.9e-43 178.7 222 47.3
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 8.4e-43 177.9 224 46.0
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 1.6e-41 173.7 229 43.7
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 2.7e-41 172.9 228 43.4
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 4.6e-41 172.2 213 43.7
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 1.8e-40 170.2 282 35.5
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 8.7e-40 167.9 282 37.2
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.0e-36 156.8 122 63.9
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.9e-35 152.9 122 61.5
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 2.5e-34 149.8 223 40.4
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 5.5e-34 148.7 230 40.4
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 6.1e-33 145.2 166 47.0
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 1.0e-32 144.4 131 55.0
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 8.7e-32 141.4 200 45.5
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 1.5e-31 140.6 333 30.0
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 4.3e-31 139.0 87 78.2
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 1.4e-29 134.0 99 64.6
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 2.5e-26 123.2 144 49.3
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 6.7e-24 115.2 120 47.5
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 6.3e-22 108.6 165 38.8
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 1.1e-21 107.8 82 59.8
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 2.6e-20 103.2 90 57.8
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.1e-17 93.6 109 45.0
Actinidia09327 Actinidia chinensis HOM05D007273 ORTHO05D009230 5.5e-10 68.9 122 39.3
MCO07G627 Micromonas commoda HOM05D007273 ORTHO05D009230 7.2e-10 68.6 219 26.0
TPR.G3731 Trifolium pratense HOM05D007273 ORTHO05D009230 2.7e-09 66.6 44 70.5
SEGI_36701 Sequoiadendron giganteum HOM05D007003 ORTHO05D008499 7.5e-07 58.5 257 24.9


User provided reference genes

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