Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 1.2e-43 179.5 94 100.0
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 1.9e-41 172.2 94 95.7
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 2.1e-40 168.7 94 91.5
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 7.6e-38 160.2 90 92.2
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 7.6e-38 160.2 90 92.2
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 1.3e-37 159.5 94 87.2
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 5.4e-36 154.1 94 85.1
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 9.3e-36 153.3 94 81.9
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 1.6e-35 152.5 94 83.0
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 3.5e-35 151.4 94 81.9
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 3.5e-35 151.4 88 86.4
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 6.0e-35 150.6 94 79.8
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 6.0e-35 150.6 94 79.8
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 6.0e-35 150.6 94 83.0
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 6.0e-35 150.6 94 83.0
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 6.0e-35 150.6 94 83.0
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 6.0e-35 150.6 94 80.9
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 1.0e-34 149.8 94 81.9
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 2.3e-34 148.7 94 80.9
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 2.3e-34 148.7 94 81.9
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 3.0e-34 148.3 88 85.2
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 3.0e-34 148.3 88 85.2
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 3.0e-34 148.3 94 80.9
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 3.9e-34 147.9 94 80.9
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 5.1e-34 147.5 94 79.8
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 6.7e-34 147.1 86 86.0
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 6.7e-34 147.1 94 79.8
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 8.7e-34 146.7 94 78.7
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 8.7e-34 146.7 94 78.7
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 8.7e-34 146.7 93 79.6
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 1.1e-33 146.4 94 79.8
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 1.1e-33 146.4 94 79.8
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 1.1e-33 146.4 94 78.7
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 1.5e-33 146.0 94 80.9
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 1.9e-33 145.6 91 82.4
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 1.9e-33 145.6 94 78.7
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 1.9e-33 145.6 95 81.1
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 2.5e-33 145.2 94 78.7
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 2.5e-33 145.2 94 78.7
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 2.5e-33 145.2 94 77.7
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 3.3e-33 144.8 94 78.7
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 4.3e-33 144.4 94 79.8
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 4.3e-33 144.4 95 80.0
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 4.3e-33 144.4 94 78.7
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 4.3e-33 144.4 89 80.9
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 4.3e-33 144.4 89 80.9
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 5.6e-33 144.1 92 81.5
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 7.4e-33 143.7 94 78.7
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 7.4e-33 143.7 95 78.9
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 7.4e-33 143.7 94 76.6
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 9.6e-33 143.3 86 80.2
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 9.6e-33 143.3 94 78.7
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 1.3e-32 142.9 89 79.8
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 1.3e-32 142.9 94 74.5
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 1.6e-32 142.5 94 75.5
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 2.8e-32 141.7 91 78.0
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 8.1e-32 140.2 91 79.1
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.1e-31 139.8 90 77.8
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.1e-31 139.8 90 77.8
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 2.4e-31 138.7 96 78.1
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 3.1e-31 138.3 86 80.2
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 5.3e-31 137.5 91 75.8
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 9.0e-31 136.7 81 81.5
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 2.0e-30 135.6 92 75.0
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 2.6e-30 135.2 93 76.3
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 2.6e-30 135.2 91 74.7
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 2.6e-30 135.2 86 76.7
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 4.5e-30 134.4 85 77.6
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 5.8e-30 134.0 92 72.8
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 9.9e-30 133.3 92 71.7
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 1.3e-29 132.9 92 71.7
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 1.7e-29 132.5 86 75.6
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 3.8e-29 131.3 83 77.1
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 6.4e-29 130.6 93 68.8
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 6.4e-29 130.6 86 74.4
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 8.4e-29 130.2 86 74.4
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 8.4e-29 130.2 93 68.8
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 2.5e-28 128.6 79 79.7
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 2.5e-28 128.6 92 69.6
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 4.2e-28 127.9 91 71.4
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 4.2e-28 127.9 73 90.4
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 5.5e-28 127.5 84 75.0
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 5.5e-28 127.5 93 71.0
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 7.1e-28 127.1 79 77.2
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 9.3e-28 126.7 84 73.8
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 9.3e-28 126.7 101 66.3
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 9.3e-28 126.7 84 73.8
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 9.3e-28 126.7 84 73.8
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 9.3e-28 126.7 84 73.8
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 9.3e-28 126.7 94 69.1
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 2.7e-27 125.2 84 72.6
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 4.6e-27 124.4 159 49.7
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 2.3e-26 122.1 76 82.9
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 6.7e-26 120.6 84 73.8
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 1.1e-25 119.8 75 82.7
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 2.5e-25 118.6 74 82.4
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 4.3e-25 117.9 86 67.4
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 5.6e-25 117.5 91 63.7
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 7.4e-25 117.1 98 63.3
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 7.4e-25 117.1 73 82.2
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 6.2e-24 114.0 77 77.9
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 1.4e-23 112.8 73 79.5
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 2.4e-23 112.1 73 78.1
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 3.1e-23 111.7 76 75.0
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 1.5e-22 109.4 95 61.1
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 1.5e-22 109.4 87 63.2
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 2.6e-22 108.6 74 77.0
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 7.6e-22 107.1 73 72.6
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 1.0e-21 106.7 73 72.6
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 1.0e-21 106.7 66 77.3
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 9.3e-20 100.1 80 63.8
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 1.6e-19 99.4 64 73.4
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 5.1e-18 94.4 84 58.3
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 5.1e-18 94.4 79 58.2
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 2.4e-15 85.5 108 49.1
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 2.0e-14 82.4 69 62.3
Cre08.g385900 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 2.4e-07 58.9 79 39.2
Cc05_g15440 Coffea canephora HOM05D002854 ORTHO05D003051 3.4e-06 55.1 91 38.5
Hma1.2p1_2203F.1_g317080 Hydrangea macrophylla HOM05D002854 ORTHO05D003051 4.5e-06 54.7 89 39.3
Cfa021906 Carpinus fangiana HOM05D002854 ORTHO05D003051 5.9e-06 54.3 91 39.6
Haze_09882 Corylus avellana HOM05D002854 ORTHO05D003051 5.9e-06 54.3 91 39.6
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 7.7e-06 53.9 89 37.1
MD11G1039000 Malus domestica HOM05D002854 ORTHO05D003051 7.7e-06 53.9 92 38.0


User provided reference genes

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