Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010254g0010 Nicotiana tabacum HOM05D006819 ORTHO05D008763 3.4e-182 642.9 818 100.0
Nitab4.5_0001764g0060 Nicotiana tabacum HOM05D006819 ORTHO05D008763 5.0e-170 602.4 818 97.8
PGSC0003DMG400000632 Solanum tuberosum HOM05D006819 ORTHO05D008763 5.8e-150 535.8 818 94.1
CAN.G407.98 Capsicum annuum HOM05D006819 ORTHO05D008763 1.9e-145 520.8 818 92.9
Solyc03g116560.1 Solanum lycopersicum HOM05D006819 ORTHO05D008763 1.2e-142 511.5 819 93.4
Sopen03g035470 Solanum pennellii HOM05D006819 ORTHO05D008763 1.5e-142 511.1 816 93.5
Peaxi162Scf00332g00075 Petunia axillaris HOM05D006819 ORTHO05D008763 3.7e-112 410.2 815 87.5
Dinv30584 Davidia involucrata HOM05D006819 ORTHO05D008763 6.3e-96 356.3 254 70.1
Actinidia01760 Actinidia chinensis HOM05D006819 ORTHO05D008763 8.2e-88 329.3 254 65.4
Lj5C69T16 Lonicera japonica HOM05D006819 ORTHO05D008763 4.2e-84 317.0 256 62.9
vmacro19477 Vaccinium macrocarpon HOM05D006819 ORTHO05D008763 8.8e-82 309.3 257 62.6
CSS0026240 Camellia sinensis var. sinensis HOM05D006819 ORTHO05D008763 2.4e-79 301.2 229 66.8
DCAR_025499 Daucus carota HOM05D006819 ORTHO05D008763 1.2e-78 298.9 255 61.2
CSS0002572 Camellia sinensis var. sinensis HOM05D006819 ORTHO05D008763 5.9e-78 296.6 223 65.9
Rhsim08G0214900 Rhododendron simsii HOM05D006819 ORTHO05D008763 1.3e-77 295.4 256 60.5
Rhsim04G0187400 Rhododendron simsii HOM05D006819 ORTHO05D008763 1.7e-77 295.0 256 61.3
Prupe.3G082900 Prunus persica HOM05D006819 ORTHO05D008763 2.2e-77 294.7 254 58.7
Migut.D01062 Erythranthe guttata HOM05D006819 ORTHO05D008763 8.8e-74 282.7 255 54.9
Lsat_1_v5_gn_4_106101 Lactuca sativa HOM05D006819 ORTHO05D008763 3.4e-73 280.8 252 55.6
TAR383G0223 Trochodendron aralioides HOM05D006819 ORTHO05D008763 2.8e-72 277.7 254 56.3
Haze_16531 Corylus avellana HOM05D006819 ORTHO05D008763 5.4e-71 273.5 254 57.5
QL05p028543 Quercus lobata HOM05D006819 ORTHO05D008763 9.1e-71 272.7 254 57.9
Cc04_g04190 Coffea canephora HOM05D006819 ORTHO05D008763 1.2e-70 272.3 250 57.6
Nn8g39431 Nelumbo nucifera HOM05D006819 ORTHO05D008763 1.2e-70 272.3 254 57.1
Cfa001984 Carpinus fangiana HOM05D006819 ORTHO05D008763 3.5e-70 270.8 254 56.3
SGA_v2.0_scaffold16G07604 Striga asiatica HOM05D006819 ORTHO05D008763 5.9e-70 270.0 255 53.7
Cpa.g.sc10.236 Carica papaya HOM05D006819 ORTHO05D008763 7.7e-70 269.6 254 56.7
Ciclev10024942m.g Citrus clementina HOM05D006819 ORTHO05D008763 2.9e-69 267.7 255 55.7
HanXRQChr09g0274981 Helianthus annuus HOM05D006819 ORTHO05D008763 5.0e-69 266.9 253 53.0
RcHm_v2.0_Chr2g0136061 Rosa chinensis HOM05D006819 ORTHO05D008763 5.0e-69 266.9 254 54.7
FvH4_6g30030 Fragaria vesca HOM05D006819 ORTHO05D008763 8.6e-69 266.2 254 55.5
FAN14G2986 Fragaria x ananassa HOM05D006819 ORTHO05D008763 8.6e-69 266.2 254 55.5
MD17G1208200 Malus domestica HOM05D006819 ORTHO05D008763 8.6e-69 266.2 256 55.1
ClCG07G012740 Citrullus lanatus HOM05D006819 ORTHO05D008763 7.2e-68 263.1 254 51.6
Atru.chr1.3043 Acer truncatum HOM05D006819 ORTHO05D008763 1.2e-67 262.3 256 56.2
FAN05G3290 Fragaria x ananassa HOM05D006819 ORTHO05D008763 1.6e-67 261.9 254 55.1
Duzib235G1541 Durio zibethinus HOM05D006819 ORTHO05D008763 1.4e-66 258.8 253 55.3
FAN09G2760 Fragaria x ananassa HOM05D006819 ORTHO05D008763 2.3e-66 258.1 254 53.9
Lalb_Chr22g0350931 Lupinus albus HOM05D006819 ORTHO05D008763 4.0e-66 257.3 253 53.0
Hund00538 Selenicereus undatus HOM05D006819 ORTHO05D008763 2.0e-65 255.0 253 52.6
GSVIVG01017297001 Vitis vinifera HOM05D006819 ORTHO05D008763 3.4e-65 254.2 253 53.4
ECA232G0226 Erigeron canadensis HOM05D006819 ORTHO05D008763 4.4e-65 253.8 255 52.2
arahy.Tifrunner.gnm1.ann1.6R2JPG Arachis hypogaea HOM05D006819 ORTHO05D008763 2.2e-64 251.5 250 52.8
arahy.Tifrunner.gnm1.ann1.GQ0MHW Arachis hypogaea HOM05D006819 ORTHO05D008763 2.2e-64 251.5 250 52.8
CsaV3_4G001460 Cucumis sativus L. HOM05D006819 ORTHO05D008763 2.2e-64 251.5 253 49.8
EL10Ac9g21918 Beta vulgaris HOM05D006819 ORTHO05D008763 2.8e-64 251.1 254 53.5
CiPaw.02G155800 Carya illinoinensis HOM05D006819 ORTHO05D008763 2.8e-64 251.1 258 52.7
arahy.Tifrunner.gnm1.ann1.6PYW3K Arachis hypogaea HOM05D006819 ORTHO05D008763 6.3e-64 250.0 250 52.8
arahy.Tifrunner.gnm1.ann1.UYKR6J Arachis hypogaea HOM05D006819 ORTHO05D008763 6.3e-64 250.0 250 52.8
PGR031G3623 Punica granatum HOM05D006819 ORTHO05D008763 6.3e-64 250.0 256 51.6
COL.COLO4_12924 Corchorus olitorius HOM05D006819 ORTHO05D008763 8.3e-64 249.6 254 52.8
MELO3C017894.2 Cucumis melo HOM05D006819 ORTHO05D008763 8.3e-64 249.6 254 50.8
SalBow2G2822 Salvia bowleyana HOM05D006819 ORTHO05D008763 1.4e-63 248.8 255 49.4
SalBow2G3436 Salvia bowleyana HOM05D006819 ORTHO05D008763 2.4e-63 248.1 251 49.8
Sed0026792 Sechium edule HOM05D006819 ORTHO05D008763 4.1e-63 247.3 255 51.4
Aqoxy7G03720 Aquilegia oxysepala HOM05D006819 ORTHO05D008763 7.0e-63 246.5 257 51.4
THA.LOC104815536 Tarenaya hassleriana HOM05D006819 ORTHO05D008763 9.2e-63 246.1 251 53.4
AUR62016357 Chenopodium quinoa HOM05D006819 ORTHO05D008763 2.0e-62 245.0 255 51.8
Sc10g0005770 Simmondsia chinensis HOM05D006819 ORTHO05D008763 2.0e-62 245.0 254 51.2
Lj3g0013909 Lotus japonicus HOM05D006819 ORTHO05D008763 1.0e-61 242.7 250 51.6
AUR62011538 Chenopodium quinoa HOM05D006819 ORTHO05D008763 1.7e-61 241.9 255 51.0
AL1G60900 Arabidopsis lyrata HOM05D006819 ORTHO05D008763 3.3e-60 237.7 249 51.8
Medtr2g103520 Medicago truncatula HOM05D006819 ORTHO05D008763 1.6e-59 235.3 252 48.8
Sp1g39170 Schrenkiella parvula HOM05D006819 ORTHO05D008763 4.7e-59 233.8 254 50.8
AT1G52620 Arabidopsis thaliana HOM05D006819 ORTHO05D008763 1.0e-58 232.6 254 49.2
TPR.G37179 Trifolium pratense HOM05D006819 ORTHO05D008763 5.2e-58 230.3 250 48.4
Aa31LG10G2400 Aethionema arabicum HOM05D006819 ORTHO05D008763 2.0e-57 228.4 252 50.0
TWI18G0691 Tripterygium wilfordii HOM05D006819 ORTHO05D008763 7.5e-57 226.5 254 50.4
Carub.0001s4161 Capsella rubella HOM05D006819 ORTHO05D008763 2.9e-56 224.6 254 50.8
Glyma.13G364500 Glycine max HOM05D006819 ORTHO05D008763 2.9e-56 224.6 255 47.8
Potri.001G139200 Populus trichocarpa HOM05D006819 ORTHO05D008763 1.1e-55 222.6 253 48.6
Glyma.15G009300 Glycine max HOM05D006819 ORTHO05D008763 9.2e-55 219.5 250 47.2
Ca_20110_v3 Cicer arietinum L. HOM05D006819 ORTHO05D008763 1.1e-52 212.6 299 40.5
BraA06t23391Z Brassica rapa HOM05D006819 ORTHO05D008763 3.6e-51 207.6 254 47.2
A06p01730 Brassica napus HOM05D006819 ORTHO05D008763 4.7e-51 207.2 254 46.9
Phvul.005G176600 Phaseolus vulgaris HOM05D006819 ORTHO05D008763 8.0e-51 206.5 250 45.2
C06p08050 Brassica napus HOM05D006819 ORTHO05D008763 1.5e-49 202.2 255 45.9
BolC6t35888H Brassica oleracea HOM05D006819 ORTHO05D008763 1.5e-49 202.2 255 45.9
Sabra01G0108200 Salix brachista HOM05D006819 ORTHO05D008763 4.4e-49 200.7 247 46.6
BcaC08g43437 Brassica carinata HOM05D006819 ORTHO05D008763 5.8e-49 200.3 255 45.5
Eucgr.J03057 Eucalyptus grandis HOM05D006819 ORTHO05D008763 5.8e-49 200.3 258 45.3
PSO210G6668 Papaver somniferum HOM05D006819 ORTHO05D008763 7.5e-49 199.9 258 45.7
Gohir.D10G064600 Gossypium hirsutum HOM05D006819 ORTHO05D008763 2.9e-48 198.0 226 49.1
Gorai.011G068600 Gossypium raimondii HOM05D006819 ORTHO05D008763 2.9e-48 198.0 226 48.7
CDE02G2030 Ceratophyllum demersum HOM05D006819 ORTHO05D008763 3.7e-48 197.6 250 47.6
PSO210G0638 Papaver somniferum HOM05D006819 ORTHO05D008763 1.9e-47 195.3 258 45.0
Ah.01g020740 Amaranthus hybridus HOM05D006819 ORTHO05D008763 1.1e-44 186.0 201 50.2
VMungo1080G1389 Vigna mungo HOM05D006819 ORTHO05D008763 3.3e-44 184.5 252 40.1
CARHR042740 Cardamine hirsuta HOM05D006819 ORTHO05D008763 9.5e-44 183.0 230 47.8
Manes.11G054300 Manihot esculenta HOM05D006819 ORTHO05D008763 1.2e-41 176.0 219 44.7
Thhalv10011244m.g Eutrema salsugineum HOM05D006819 ORTHO05D008763 2.6e-41 174.9 227 45.4
CAN.G273.13 Capsicum annuum HOM05D000004 ORTHO05D000002 9.9e-41 172.9 110 83.6
SHI20606 Sapria himalayana HOM05D006819 ORTHO05D008763 5.4e-39 167.2 224 40.6
Sc25g0002730 Simmondsia chinensis HOM05D006819 ORTHO05D008763 7.8e-38 163.3 201 45.3
Psat5g301600 Pisum sativum HOM05D006819 ORTHO05D008763 1.3e-37 162.5 254 38.6
Oeu015243.5 Olea europaea HOM05D006819 ORTHO05D008763 2.4e-34 151.8 112 63.4
Thecc.06G069300 Theobroma cacao HOM05D006819 ORTHO05D008763 2.6e-33 148.3 127 58.3
Actinidia15785 Actinidia chinensis HOM05D006819 ORTHO05D008763 2.7e-30 138.3 104 63.5
SEGI_26115 Sequoiadendron giganteum HOM05D006819 ORTHO05D008763 3.9e-29 134.4 246 35.0
SalBow2G3112 Salvia bowleyana HOM05D006819 ORTHO05D008763 1.2e-27 129.4 129 48.1
ATR0322G052 Amborella trichopoda HOM05D006819 ORTHO05D008763 2.8e-27 128.3 128 51.6
Gohir.A10G062900 Gossypium hirsutum HOM05D006819 ORTHO05D008763 1.8e-26 125.6 120 49.2
Psat0s2501g0040 Pisum sativum HOM05D006819 ORTHO05D008763 7.6e-25 120.2 140 45.0
Psat0s2501g0080 Pisum sativum HOM05D006819 ORTHO05D008763 7.6e-25 120.2 140 45.0
Oeu026322.1 Olea europaea HOM05D006819 ORTHO05D008763 5.4e-23 114.0 99 55.6
Atru.chr4.3032 Acer truncatum HOM05D006819 ORTHO05D008763 7.8e-22 110.2 110 53.6
Zm00001eb196310 Zea mays HOM05D006819 ORTHO05D008763 2.3e-21 108.6 153 41.2
FAN02G4037 Fragaria x ananassa HOM05D006819 ORTHO05D008763 2.1e-14 85.5 55 69.1
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 2.1e-11 75.5 226 27.4
PSO170G0141 Papaver somniferum HOM05D000424 ORTHO05D000355 6.2e-11 73.9 225 26.2
Potri.004G102700 Populus trichocarpa HOM05D000424 ORTHO05D000355 6.2e-11 73.9 224 27.2
Sabra04G0077900 Salix brachista HOM05D000424 ORTHO05D000355 6.2e-11 73.9 224 27.2
Gohir.A08G137650 Gossypium hirsutum HOM05D000104 ORTHO05D008354 3.1e-10 71.6 183 25.7
THA.LOC104817005 Tarenaya hassleriana HOM05D000104 ORTHO05D009920 1.2e-09 69.7 234 25.2
CAN.G574.31 Capsicum annuum HOM05D000424 ORTHO05D000355 1.5e-09 69.3 215 26.5
Solyc03g116540.1 Solanum lycopersicum HOM05D000424 ORTHO05D000355 2.6e-09 68.6 225 25.8
PGSC0003DMG400000611 Solanum tuberosum HOM05D000424 ORTHO05D000355 2.6e-09 68.6 225 24.9
SGA_v2.0_scaffold60G20860 Striga asiatica HOM05D000104 ORTHO05D009920 2.6e-09 68.6 223 24.2
SHI03956 Sapria himalayana HOM05D005973 ORTHO05D007285 4.5e-09 67.8 243 21.8
BraA09t40855Z Brassica rapa HOM05D000424 ORTHO05D002854 5.8e-09 67.4 169 31.4
A09p54420 Brassica napus HOM05D000424 ORTHO05D002854 7.6e-09 67.0 169 30.8
AUR62018101 Chenopodium quinoa HOM05D006569 ORTHO05D007515 7.6e-09 67.0 187 27.3
DCAR_014305 Daucus carota HOM05D000534 ORTHO05D008146 7.6e-09 67.0 188 26.1
Migut.L00219 Erythranthe guttata HOM05D000424 ORTHO05D000355 1.3e-08 66.2 175 28.0
Prupe.2G122500 Prunus persica HOM05D000104 ORTHO05D009920 1.3e-08 66.2 230 23.9
Hma1.2p1_0631F.1_g192390 Hydrangea macrophylla HOM05D006556 ORTHO05D008146 1.7e-08 65.9 189 27.0
Sabra05G0084800 Salix brachista HOM05D006556 ORTHO05D008146 1.7e-08 65.9 188 28.7
PSO339G1228 Papaver somniferum HOM05D007172 ORTHO05D009267 2.2e-08 65.5 182 25.8
Sopen03g035440 Solanum pennellii HOM05D000424 ORTHO05D000355 2.9e-08 65.1 225 24.4
Dinv21881 Davidia involucrata HOM05D000104 ORTHO05D009920 6.4e-08 63.9 117 29.1
PSO017G2364 Papaver somniferum HOM05D000424 ORTHO05D000355 8.4e-08 63.5 225 24.9
Potri.005G102400 Populus trichocarpa HOM05D006556 ORTHO05D008146 1.1e-07 63.2 188 27.1
Sp5g12350 Schrenkiella parvula HOM05D000424 ORTHO05D000355 1.1e-07 63.2 216 25.0
PGSC0003DMG400008266 Solanum tuberosum HOM05D007675 ORTHO05D009699 1.1e-07 63.2 275 23.3
CSS0011638 Camellia sinensis var. sinensis HOM05D000424 ORTHO05D000355 1.4e-07 62.8 172 27.3
Ciclev10031257m.g Citrus clementina HOM05D000424 ORTHO05D008586 1.4e-07 62.8 213 26.8
Manes.08G089400 Manihot esculenta HOM05D000104 ORTHO05D009920 1.4e-07 62.8 226 25.7
PSO017G0179 Papaver somniferum HOM05D005764 ORTHO05D006600 1.4e-07 62.8 241 24.5
vmacro19175 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 1.4e-07 62.8 276 22.5
VMungo1309G1576 Vigna mungo HOM05D000104 ORTHO05D009920 1.4e-07 62.8 171 25.1
QL04p067861 Quercus lobata HOM05D005764 ORTHO05D006600 2.5e-07 62.0 253 23.3
TAR383G0964 Trochodendron aralioides HOM05D000424 ORTHO05D000355 4.2e-07 61.2 227 24.2
Actinidia01390 Actinidia chinensis HOM05D000424 ORTHO05D000355 7.1e-07 60.5 199 26.6
CSS0044152 Camellia sinensis var. sinensis HOM05D000424 ORTHO05D000355 7.1e-07 60.5 250 25.6
AUR62011540 Chenopodium quinoa HOM05D000424 ORTHO05D000355 7.1e-07 60.5 242 21.9
Rhsim04G0212000 Rhododendron simsii HOM05D001150 ORTHO05D000998 7.1e-07 60.5 212 25.0
Aqoxy7G02204 Aquilegia oxysepala HOM05D000424 ORTHO05D000355 9.3e-07 60.1 227 23.8
CiPaw.07G116900 Carya illinoinensis HOM05D000424 ORTHO05D002854 9.3e-07 60.1 216 25.5
Glyma.12G191600 Glycine max HOM05D000104 ORTHO05D009920 9.3e-07 60.1 171 24.0
Carub.0002s1237 Capsella rubella HOM05D007291 ORTHO05D009038 1.2e-06 59.7 251 23.5
CDE02G0959 Ceratophyllum demersum HOM05D007402 ORTHO05D003673 1.2e-06 59.7 122 27.9
EL10Ac4g09447 Beta vulgaris HOM05D006888 ORTHO05D008371 2.1e-06 58.9 199 28.1
Oeu003964.1 Olea europaea HOM05D006556 ORTHO05D008146 2.1e-06 58.9 228 25.0
Phvul.009G206300 Phaseolus vulgaris HOM05D000104 ORTHO05D009920 2.1e-06 58.9 171 25.1
SEGI_21536 Sequoiadendron giganteum HOM05D007639 ORTHO05D009509 2.1e-06 58.9 192 25.0
PGSC0003DMG400008611 Solanum tuberosum HOM05D001779 ORTHO05D001753 2.1e-06 58.9 200 27.0
arahy.Tifrunner.gnm1.ann1.W2W9XI Arachis hypogaea HOM05D000104 ORTHO05D009920 2.7e-06 58.5 239 23.0
SalBow5G5686 Salvia bowleyana HOM05D000104 ORTHO05D009920 2.7e-06 58.5 187 24.6
SHI16040 Sapria himalayana HOM05D006503 ORTHO05D008116 2.7e-06 58.5 188 25.5
SMO114G0106 Selaginella moellendorffii HOM05D024545 ORTHO05D008952 2.7e-06 58.5 200 25.5
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 3.5e-06 58.2 242 26.0
COL.COLO4_21653 Corchorus olitorius HOM05D000162 ORTHO05D000090 3.5e-06 58.2 195 26.7
CsaV3_4G027960 Cucumis sativus L. HOM05D000104 ORTHO05D009920 3.5e-06 58.2 165 23.6
Lalb_Chr03g0040111 Lupinus albus HOM05D000104 ORTHO05D009920 3.5e-06 58.2 171 22.8
PSO675G3831 Papaver somniferum HOM05D003056 ORTHO05D003422 3.5e-06 58.2 159 27.7
Solyc10g051010.3 Solanum lycopersicum HOM05D007675 ORTHO05D009699 3.5e-06 58.2 256 22.3
HPP92_005106 Vanilla planifolia HOM05D006556 ORTHO05D008146 3.5e-06 58.2 216 25.9
BcaC03g14744 Brassica carinata HOM05D007291 ORTHO05D009038 4.6e-06 57.8 236 22.5
C02p21950 Brassica napus HOM05D007291 ORTHO05D009038 4.6e-06 57.8 236 22.5
BolC2t08326H Brassica oleracea HOM05D007291 ORTHO05D009038 4.6e-06 57.8 236 22.5
Carub.0006s1725 Capsella rubella HOM05D007340 ORTHO05D008979 4.6e-06 57.8 221 24.0
MELO3C010266.2 Cucumis melo HOM05D004824 ORTHO05D003903 4.6e-06 57.8 176 27.8
Glyma.09G082100 Glycine max HOM05D001779 ORTHO05D001753 4.6e-06 57.8 156 26.3
Ciclev10026987m.g Citrus clementina HOM05D000424 ORTHO05D000355 6.0e-06 57.4 174 23.6
Peaxi162Scf00126g01125 Petunia axillaris HOM05D001779 ORTHO05D001753 6.0e-06 57.4 187 27.3
Sc03g0004000 Simmondsia chinensis HOM05D006556 ORTHO05D008146 6.0e-06 57.4 189 26.5
AT3G22670 Arabidopsis thaliana HOM05D000424 ORTHO05D000355 7.9e-06 57.0 206 23.3
arahy.Tifrunner.gnm1.ann1.H4NKJU Arachis hypogaea HOM05D000104 ORTHO05D009920 7.9e-06 57.0 239 23.0
arahy.Tifrunner.gnm1.ann1.S1ZEXT Arachis hypogaea HOM05D004182 ORTHO05D007321 7.9e-06 57.0 107 32.7
Cpa.g.sc211.34 Carica papaya HOM05D005764 ORTHO05D006600 7.9e-06 57.0 245 23.3
MBI10_g08552_MAGBIO Magnolia biondii HOM05D002007 ORTHO05D000355 7.9e-06 57.0 256 25.0
Oeu051440.2 Olea europaea HOM05D006080 ORTHO05D007382 7.9e-06 57.0 117 28.2
PSO541G6324 Papaver somniferum HOM05D003056 ORTHO05D003422 7.9e-06 57.0 159 27.0


User provided reference genes

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