Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 3.4e-134 481.9 283 100.0
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 7.4e-121 437.6 275 88.4
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 3.6e-107 392.1 279 77.1
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 2.3e-106 389.4 279 71.0
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 3.3e-105 385.6 279 69.9
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 5.9e-102 374.8 271 75.6
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 2.1e-99 366.3 272 70.2
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 9.8e-73 277.7 278 60.1
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 2.9e-72 276.2 271 63.5
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 5.4e-71 271.9 279 58.4
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 7.0e-71 271.6 270 60.4
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 1.0e-69 267.7 274 58.8
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 2.5e-68 263.1 270 55.6
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 4.0e-66 255.8 275 53.8
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 5.2e-66 255.4 274 55.1
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 5.2e-66 255.4 270 54.8
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 6.8e-66 255.0 275 57.5
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 3.4e-65 252.7 278 57.6
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 9.9e-65 251.1 270 53.7
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 2.2e-64 250.0 270 60.7
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 4.9e-64 248.8 270 52.6
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 8.3e-64 248.1 280 50.4
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 1.9e-63 246.9 269 53.2
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 1.9e-63 246.9 277 52.3
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 2.4e-63 246.5 276 59.8
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 2.4e-63 246.5 269 53.9
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 3.2e-63 246.1 282 54.6
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 3.2e-63 246.1 266 60.2
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 1.2e-62 244.2 271 55.7
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.2e-62 244.2 272 55.5
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 1.2e-62 244.2 275 52.7
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 1.2e-62 244.2 269 59.5
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.6e-62 243.8 272 50.0
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 6.0e-62 241.9 281 51.6
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 1.0e-61 241.1 271 53.5
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 1.0e-61 241.1 273 51.3
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 2.3e-61 240.0 272 52.6
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 5.1e-61 238.8 270 51.9
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 5.1e-61 238.8 179 67.0
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 1.1e-60 237.7 269 55.4
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 2.5e-60 236.5 273 58.6
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 3.3e-60 236.1 270 55.6
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 4.3e-60 235.7 272 58.1
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 4.3e-60 235.7 185 69.2
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 4.3e-60 235.7 301 50.8
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 5.6e-60 235.3 179 65.4
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 1.2e-59 234.2 278 51.1
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 1.2e-59 234.2 271 50.2
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 1.6e-59 233.8 273 55.7
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 2.1e-59 233.4 275 49.5
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 2.8e-59 233.0 273 50.9
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 2.4e-58 229.9 178 63.5
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 5.2e-58 228.8 271 49.8
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 6.8e-58 228.4 176 64.2
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 8.9e-58 228.0 180 62.8
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 8.9e-58 228.0 178 62.4
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 1.2e-57 227.6 178 62.9
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 1.5e-57 227.3 178 63.5
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 1.5e-57 227.3 279 56.3
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 1.5e-57 227.3 173 68.2
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 2.0e-57 226.9 178 62.9
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 2.0e-57 226.9 271 50.9
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 2.0e-57 226.9 330 46.7
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 2.6e-57 226.5 273 54.9
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 4.4e-57 225.7 251 51.4
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 7.6e-57 224.9 178 61.8
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 9.9e-57 224.6 184 62.5
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 1.3e-56 224.2 178 61.8
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 1.7e-56 223.8 178 63.5
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 2.2e-56 223.4 188 58.5
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 3.8e-56 222.6 180 65.6
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 1.9e-55 220.3 178 61.2
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 1.2e-54 217.6 209 55.5
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 4.6e-54 215.7 178 61.2
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 6.0e-54 215.3 275 50.5
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 3.0e-53 213.0 202 55.9
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 3.9e-53 212.6 185 59.5
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 1.5e-52 210.7 196 55.6
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 1.9e-52 210.3 265 49.4
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 3.3e-52 209.5 274 49.3
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 5.6e-52 208.8 185 58.4
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 7.3e-52 208.4 266 49.2
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 9.6e-52 208.0 179 58.1
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 3.6e-51 206.1 185 57.3
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 3.1e-50 203.0 186 59.1
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 5.2e-50 202.2 179 55.9
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 9.9e-49 198.0 181 57.5
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 2.9e-48 196.4 190 58.4
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 4.9e-48 195.7 182 57.7
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 8.4e-48 194.9 185 53.0
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 7.1e-47 191.8 183 53.0
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 6.9e-42 175.3 179 49.7
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 1.7e-40 170.6 228 54.8
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 6.4e-40 168.7 171 56.7
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 5.4e-39 165.6 129 62.8
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 6.0e-38 162.2 221 51.1
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 5.8e-33 145.6 170 45.3
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 2.9e-32 143.3 157 49.0
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 1.1e-31 141.4 118 62.7
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 2.1e-30 137.1 173 42.2
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 8.7e-29 131.7 173 40.5
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 2.0e-25 120.6 176 38.6
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 2.5e-23 113.6 203 36.9
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 1.6e-22 110.9 79 68.4
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 3.5e-22 109.8 82 59.8
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 3.3e-20 103.2 80 63.8
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 5.7e-20 102.4 116 49.1
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 3.6e-14 83.2 76 52.6
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 3.0e-13 80.1 95 48.4
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 5.9e-09 65.9 41 78.0


User provided reference genes

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