Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010245g0010 Nicotiana tabacum HOM05D000808 ORTHO05D000863 4.7e-42 174.1 87 100.0
Nitab4.5_0005106g0040 Nicotiana tabacum HOM05D000808 ORTHO05D034012 1.7e-20 102.4 85 64.7
Sopen07g032590 Solanum pennellii HOM05D000808 ORTHO05D000863 5.1e-20 100.9 88 63.6
Solyc07g064390.1 Solanum lycopersicum HOM05D000808 ORTHO05D000863 4.3e-19 97.8 88 62.5
PGSC0003DMG400036893 Solanum tuberosum HOM05D000808 ORTHO05D000863 5.6e-19 97.4 88 62.5
Nitab4.5_0000592g0030 Nicotiana tabacum HOM05D000808 ORTHO05D000863 4.7e-18 94.4 85 60.0
Peaxi162Scf00592g00001 Petunia axillaris HOM05D000808 ORTHO05D000863 6.2e-18 94.0 85 58.8
Solyc01g081000.3 Solanum lycopersicum HOM05D000808 ORTHO05D000863 2.6e-16 88.6 85 52.9
Sopen01g032580 Solanum pennellii HOM05D000808 ORTHO05D000863 2.6e-16 88.6 85 52.9
CAN.G700.5 Capsicum annuum HOM05D000808 ORTHO05D000863 3.4e-16 88.2 85 55.3
Nitab4.5_0009394g0030 Nicotiana tabacum HOM05D000808 ORTHO05D000863 5.8e-16 87.4 85 54.1
CAN.G700.10 Capsicum annuum HOM05D000808 ORTHO05D000863 6.4e-15 84.0 83 53.0
PGSC0003DMG400001795 Solanum tuberosum HOM05D000808 ORTHO05D000863 6.4e-15 84.0 85 51.8
Peaxi162Scf01586g00004 Petunia axillaris HOM05D000808 ORTHO05D000863 1.1e-14 83.2 85 51.8
CAN.G700.12 Capsicum annuum HOM05D000808 ORTHO05D000863 2.8e-10 68.6 71 50.7
QL05p039911 Quercus lobata HOM05D000808 ORTHO05D000863 2.4e-09 65.5 85 44.7
Nitab4.5_0003561g0060 Nicotiana tabacum HOM05D000808 ORTHO05D000863 9.0e-09 63.5 88 44.3
Atru.chr4.1041 Acer truncatum HOM05D000808 ORTHO05D000863 2.0e-08 62.4 83 42.2
Thecc.02G094800 Theobroma cacao HOM05D000808 ORTHO05D000863 2.6e-08 62.0 82 43.9
Atru.chr4.1058 Acer truncatum HOM05D000808 ORTHO05D000863 3.4e-08 61.6 83 42.2
Haze_00806 Corylus avellana HOM05D000808 ORTHO05D000863 4.4e-08 61.2 90 40.0
TWI38G2192 Tripterygium wilfordii HOM05D000808 ORTHO05D000863 4.4e-08 61.2 79 45.6
TWI59G1229 Tripterygium wilfordii HOM05D000808 ORTHO05D000863 4.4e-08 61.2 85 40.0
RcHm_v2.0_Chr5g0018291 Rosa chinensis HOM05D000808 ORTHO05D000863 5.8e-08 60.8 85 47.1
Lj7P559T47 Lonicera japonica HOM05D000808 ORTHO05D000863 9.9e-08 60.1 87 47.1
Cpa.g.sc14.253 Carica papaya HOM05D000808 ORTHO05D000863 1.3e-07 59.7 81 40.7
FAN25G0311 Fragaria x ananassa HOM05D000808 ORTHO05D000863 1.3e-07 59.7 80 45.0
Aqoxy6G01528 Aquilegia oxysepala HOM05D000808 ORTHO05D000863 1.7e-07 59.3 83 44.6
CBR_g32289 Chara braunii HOM05D000808 ORTHO05D000863 1.7e-07 59.3 83 39.8
MD08G1210800 Malus domestica HOM05D000808 ORTHO05D000863 1.7e-07 59.3 84 41.7
Actinidia39185 Actinidia chinensis HOM05D000808 ORTHO05D000863 2.2e-07 58.9 83 44.6
MD11G1261400 Malus domestica HOM05D000808 ORTHO05D000863 2.9e-07 58.5 84 40.5
Rhsim03G0031700 Rhododendron simsii HOM05D000808 ORTHO05D000863 2.9e-07 58.5 82 42.7
FvH4_3g11340 Fragaria vesca HOM05D000808 ORTHO05D000863 3.8e-07 58.2 84 40.5
Prupe.4G157000 Prunus persica HOM05D000808 ORTHO05D000863 4.9e-07 57.8 86 43.0
Oeu032361.1 Olea europaea HOM05D000808 ORTHO05D000863 6.4e-07 57.4 85 41.2
Peaxi162Scf00071g01021 Petunia axillaris HOM05D000808 ORTHO05D000863 6.4e-07 57.4 58 55.2
Prupe.4G166700 Prunus persica HOM05D000808 ORTHO05D000863 6.4e-07 57.4 85 44.7
TAR629G0866 Trochodendron aralioides HOM05D000808 ORTHO05D000863 6.4e-07 57.4 83 41.0
FAN16G2330 Fragaria x ananassa HOM05D000808 ORTHO05D000863 8.4e-07 57.0 84 39.3
FAN21G1066 Fragaria x ananassa HOM05D000808 ORTHO05D000863 8.4e-07 57.0 80 43.8
vmacro04512 Vaccinium macrocarpon HOM05D000808 ORTHO05D000863 8.4e-07 57.0 82 39.0
Cfa011981 Carpinus fangiana HOM05D000808 ORTHO05D000863 1.1e-06 56.6 84 35.7
FAN11G0867 Fragaria x ananassa HOM05D000808 ORTHO05D000863 1.1e-06 56.6 85 43.5
Rhsim03G0031800 Rhododendron simsii HOM05D000808 ORTHO05D000863 1.1e-06 56.6 89 43.8
FvH4_3g11080 Fragaria vesca HOM05D000808 ORTHO05D000863 1.4e-06 56.2 85 43.5
Lj7C557T18 Lonicera japonica HOM05D000808 ORTHO05D000863 1.4e-06 56.2 84 42.9
TAR381G0386 Trochodendron aralioides HOM05D000808 ORTHO05D000863 1.4e-06 56.2 83 41.0
TAR381G0516 Trochodendron aralioides HOM05D000808 ORTHO05D000863 1.4e-06 56.2 83 41.0
Cfa015709 Carpinus fangiana HOM05D000808 ORTHO05D000863 1.9e-06 55.8 86 36.0
MELO3C025655.2 Cucumis melo HOM05D000808 ORTHO05D000863 1.9e-06 55.8 82 39.0
vmacro20340 Vaccinium macrocarpon HOM05D000808 ORTHO05D426772 2.4e-06 55.5 82 40.2
Zm00001eb248100 Zea mays HOM05D000808 ORTHO05D000863 2.4e-06 55.5 85 43.5
Prupe.4G166600 Prunus persica HOM05D000808 ORTHO05D000863 3.2e-06 55.1 84 36.9
CsaV3_4G032940 Cucumis sativus L. HOM05D000808 ORTHO05D000863 4.2e-06 54.7 82 39.0
Hma1.2p1_0005F.1_g004470 Hydrangea macrophylla HOM05D000808 ORTHO05D000863 4.2e-06 54.7 82 41.5
Lj2A392T41 Lonicera japonica HOM05D000808 ORTHO05D000863 4.2e-06 54.7 85 42.4
Prupe.5G049700 Prunus persica HOM05D000808 ORTHO05D000863 4.2e-06 54.7 86 38.4
QL05p054725 Quercus lobata HOM05D000808 ORTHO05D000863 4.2e-06 54.7 84 39.3
vmacro21948 Vaccinium macrocarpon HOM05D000808 ORTHO05D000863 4.2e-06 54.7 80 45.0
vmacro21949 Vaccinium macrocarpon HOM05D000808 ORTHO05D000863 4.2e-06 54.7 82 40.2
Atru.chr11.2175 Acer truncatum HOM05D000808 ORTHO05D000863 5.4e-06 54.3 86 40.7
Potri.001G381000 Populus trichocarpa HOM05D000808 ORTHO05D000863 5.4e-06 54.3 82 39.0
Hma1.2p1_0005F.1_g004480 Hydrangea macrophylla HOM05D000808 ORTHO05D000863 7.1e-06 53.9 82 40.2
Nitab4.5_0000677g0070 Nicotiana tabacum HOM05D000808 ORTHO05D000863 7.1e-06 53.9 83 41.0
QL05p054758 Quercus lobata HOM05D000808 ORTHO05D000863 7.1e-06 53.9 83 39.8
Rhsim03G0031600 Rhododendron simsii HOM05D000808 ORTHO05D000863 7.1e-06 53.9 83 41.0
VMungo0251G2369 Vigna mungo HOM05D000808 ORTHO05D000863 7.1e-06 53.9 82 37.8
Atru.chr3.1862 Acer truncatum HOM05D000808 ORTHO05D000863 9.3e-06 53.5 81 43.2
Cre06.g256300 Chlamydomonas reinhardtii HOM05D000808 ORTHO05D000863 9.3e-06 53.5 83 38.6
TAR381G0725 Trochodendron aralioides HOM05D000808 ORTHO05D000863 9.3e-06 53.5 83 38.6
TAR381G1129 Trochodendron aralioides HOM05D000808 ORTHO05D000863 9.3e-06 53.5 83 38.6


User provided reference genes

Program Settings