Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 1.3e-277 959.1 493 100.0
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 7.8e-251 870.2 494 92.9
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 3.5e-227 791.6 495 82.4
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 1.4e-212 743.0 495 79.2
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 1.3e-208 729.9 490 77.6
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 1.0e-202 710.3 497 75.3
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 8.3e-168 594.3 500 61.0
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 5.4e-167 591.7 500 61.0
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 1.2e-161 573.9 500 59.4
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 7.5e-161 571.2 493 58.8
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 3.1e-159 565.8 494 58.5
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 1.7e-157 560.1 492 58.3
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 6.1e-155 551.6 500 59.0
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 1.4e-154 550.4 502 56.6
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 3.0e-154 549.3 481 58.2
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 2.6e-153 546.2 506 57.3
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 1.7e-152 543.5 505 59.6
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 1.4e-151 540.4 499 57.3
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 1.5e-148 530.4 498 55.4
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 1.6e-147 526.9 503 55.7
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 1.6e-147 526.9 506 55.1
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 2.8e-147 526.2 502 55.2
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 3.6e-147 525.8 502 55.2
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 1.8e-146 523.5 497 55.9
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 2.6e-145 519.6 509 54.2
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 2.6e-145 519.6 502 55.2
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 2.2e-144 516.5 500 53.6
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.9e-144 516.2 482 55.4
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 4.9e-144 515.4 482 55.6
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 1.1e-143 514.2 503 53.7
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 3.2e-143 512.7 497 55.7
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 1.3e-141 507.3 498 53.8
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 5.1e-141 505.4 502 53.4
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 9.5e-140 501.1 506 53.6
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 1.2e-139 500.7 503 52.7
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 2.8e-139 499.6 499 54.5
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 2.9e-136 489.6 504 53.4
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 1.4e-135 487.3 504 51.8
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 2.1e-134 483.4 498 51.8
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 7.8e-134 481.5 444 54.5
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 5.1e-133 478.8 521 50.7
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 5.8e-129 465.3 503 52.3
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 5.8e-129 465.3 433 56.4
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 2.2e-128 463.4 499 50.5
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 1.2e-123 447.6 504 49.0
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 1.1e-122 444.5 503 49.7
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 3.1e-122 443.0 501 49.5
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 1.2e-121 441.0 420 53.8
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 3.4e-121 439.5 501 49.7
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 1.3e-120 437.6 506 48.6
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 1.1e-119 434.5 503 48.5
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 1.9e-119 433.7 520 49.4
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 3.2e-119 433.0 512 46.5
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 5.4e-119 432.2 506 48.2
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 5.4e-119 432.2 506 48.2
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 1.2e-118 431.0 506 48.0
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 1.2e-118 431.0 504 49.2
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 2.7e-118 429.9 503 47.5
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 4.6e-118 429.1 428 53.7
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 6.6e-117 425.2 410 53.9
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 8.7e-117 424.9 410 53.9
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 1.5e-116 424.1 509 47.5
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 1.6e-115 420.6 506 47.0
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 7.6e-113 411.8 504 45.6
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 1.0e-109 401.4 411 50.9
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 1.9e-108 397.1 409 50.9
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 2.5e-108 396.7 412 51.0
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 1.4e-106 391.0 411 49.1
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 1.5e-97 360.9 415 48.7
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 2.7e-94 350.1 504 42.5
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.7e-88 330.9 316 53.8
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 2.5e-87 327.0 359 49.9
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 6.3e-83 312.4 546 40.7
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 1.4e-82 311.2 238 63.9
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 6.9e-82 308.9 456 41.4
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 3.3e-76 290.0 558 35.3
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 3.3e-68 263.5 500 35.6
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 3.1e-66 256.9 499 35.3
FAN28G2802 Fragaria x ananassa HOM05D007800 ORTHO05D009881 3.9e-40 170.2 160 56.2
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 3.1e-37 160.6 471 27.0
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 9.5e-31 139.0 438 27.4
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 2.2e-27 127.9 117 53.0
AagrBONN_evm.TU.Sc2ySwM_344.183 Anthoceros agrestis HOM05D007800 ORTHO05D009881 1.7e-16 91.7 451 25.1
CDE05G3378 Ceratophyllum demersum HOM05D007800 ORTHO05D009881 5.6e-15 86.7 237 30.4
SMO302G0010 Selaginella moellendorffii HOM05D001821 ORTHO05D001778 1.5e-07 62.0 98 34.7
SMO353G0419 Selaginella moellendorffii HOM05D001821 ORTHO05D001778 9.6e-07 59.3 67 41.8


User provided reference genes

Program Settings