Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010206g0030 Nicotiana tabacum HOM05D008287 ORTHO05D010110 2.4e-71 272.3 164 100.0
Nitab4.5_0000575g0160 Nicotiana tabacum HOM05D008287 ORTHO05D010110 1.7e-21 106.7 80 92.5
PGSC0003DMG400012876 Solanum tuberosum HOM05D008287 ORTHO05D010110 7.1e-15 84.7 108 46.3
Solyc04g049407.1 Solanum lycopersicum HOM05D008287 ORTHO05D010110 1.2e-14 84.0 102 51.0
Sopen04g019400 Solanum pennellii HOM05D008287 ORTHO05D010110 1.3e-13 80.5 80 52.5
Hma1.2p1_0063F.1_g034480 Hydrangea macrophylla HOM05D008287 ORTHO05D010110 3.3e-12 75.9 80 48.8
Aqoxy1G01238 Aquilegia oxysepala HOM05D008287 ORTHO05D010110 5.6e-12 75.1 130 40.0
MSTRG.9186 Avicennia marina HOM05D008287 ORTHO05D010110 4.7e-11 72.0 81 46.9
Manes.10G045900 Manihot esculenta HOM05D008287 ORTHO05D010110 8.1e-11 71.2 83 45.8
Actinidia38852 Actinidia chinensis HOM05D008287 ORTHO05D010110 1.8e-10 70.1 81 46.9
Nn2g10792 Nelumbo nucifera HOM05D008287 ORTHO05D010110 1.8e-10 70.1 86 47.7
Sc09g0006380 Simmondsia chinensis HOM05D008287 ORTHO05D010110 1.8e-10 70.1 88 46.6
TAR629G1172 Trochodendron aralioides HOM05D008287 ORTHO05D010110 3.1e-10 69.3 86 47.7
Sabra10G0172000 Salix brachista HOM05D008287 ORTHO05D010110 4.0e-10 68.9 89 43.8
Gohir.A13G024200 Gossypium hirsutum HOM05D008287 ORTHO05D010110 6.9e-10 68.2 84 41.7
Gohir.D13G023100 Gossypium hirsutum HOM05D008287 ORTHO05D010110 6.9e-10 68.2 84 41.7
CiPaw.01G272900 Carya illinoinensis HOM05D008287 ORTHO05D010110 9.0e-10 67.8 97 55.7
Gorai.013G025800 Gossypium raimondii HOM05D008287 ORTHO05D010110 9.0e-10 67.8 85 41.2
Duzib114G0252 Durio zibethinus HOM05D008287 ORTHO05D010110 1.5e-09 67.0 84 39.3
Potri.008G039901 Populus trichocarpa HOM05D008287 ORTHO05D010110 1.5e-09 67.0 108 46.3
Thecc.10G073600 Theobroma cacao HOM05D008287 ORTHO05D010110 1.5e-09 67.0 82 41.5
Rhsim09G0151900 Rhododendron simsii HOM05D008287 ORTHO05D010110 2.0e-09 66.6 96 45.8
Potri.010G222400 Populus trichocarpa HOM05D008287 ORTHO05D010110 3.4e-09 65.9 89 61.8
Migut.F02005 Erythranthe guttata HOM05D008287 ORTHO05D010110 9.9e-09 64.3 81 48.1
HanXRQChr01g0011461 Helianthus annuus HOM05D008287 ORTHO05D010110 1.3e-08 63.9 83 45.8
Ciclev10033160m.g Citrus clementina HOM05D008287 ORTHO05D010110 6.4e-08 61.6 93 45.2
Atru.chr12.751 Acer truncatum HOM05D008287 ORTHO05D010110 1.1e-07 60.8 89 36.0
ClCG05G021010 Citrullus lanatus HOM05D008287 ORTHO05D010110 1.1e-07 60.8 91 42.9
MBI10_g13401_MAGBIO Magnolia biondii HOM05D008287 ORTHO05D010110 1.9e-07 60.1 89 42.7
Prupe.2G213800 Prunus persica HOM05D008287 ORTHO05D010110 1.9e-07 60.1 91 37.4
FAN01G1692 Fragaria x ananassa HOM05D008287 ORTHO05D010110 2.4e-07 59.7 39 66.7
Sabra08G0027300 Salix brachista HOM05D008287 ORTHO05D010110 2.4e-07 59.7 34 70.6
TPR.G822 Trifolium pratense HOM05D008287 ORTHO05D010110 2.4e-07 59.7 83 41.0
FvH4_7g19600 Fragaria vesca HOM05D008287 ORTHO05D010110 3.2e-07 59.3 41 63.4
FAN10G2561 Fragaria x ananassa HOM05D008287 ORTHO05D010110 4.2e-07 58.9 39 66.7
CsaV3_5G036300 Cucumis sativus L. HOM05D008287 ORTHO05D010110 7.1e-07 58.2 42 61.9
FAN06G2349 Fragaria x ananassa HOM05D000286 ORTHO05D009721 7.1e-07 58.2 39 66.7
Cfa021511 Carpinus fangiana HOM05D008287 ORTHO05D010110 9.3e-07 57.8 81 46.9
Cc06_g14360 Coffea canephora HOM05D008287 ORTHO05D010110 1.2e-06 57.4 33 78.8
RcHm_v2.0_Chr1g0363411 Rosa chinensis HOM05D008287 ORTHO05D010110 1.2e-06 57.4 39 66.7
Atru.chr12.776 Acer truncatum HOM05D008287 ORTHO05D010110 2.1e-06 56.6 93 38.7
ECA238G2524 Erigeron canadensis HOM05D008287 ORTHO05D010110 2.1e-06 56.6 81 40.7
CSS0035042 Camellia sinensis var. sinensis HOM05D008287 ORTHO05D010110 3.5e-06 55.8 32 71.9
Lalb_Chr19g0129701 Lupinus albus HOM05D008287 ORTHO05D010110 3.5e-06 55.8 80 35.0
MD01G1108600 Malus domestica HOM05D008287 ORTHO05D010110 3.5e-06 55.8 37 64.9
Phvul.004G082500 Phaseolus vulgaris HOM05D008287 ORTHO05D010110 4.6e-06 55.5 82 37.8
SGA_v2.0_scaffold62G21430 Striga asiatica HOM05D008287 ORTHO05D010110 4.6e-06 55.5 32 68.8
Glyma.02G073500 Glycine max HOM05D008287 ORTHO05D010110 6.0e-06 55.1 91 36.3
Glyma.16G154900 Glycine max HOM05D008287 ORTHO05D010110 7.8e-06 54.7 82 37.8


User provided reference genes

Program Settings