Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010204g0040 Nicotiana tabacum HOM05D006526 ORTHO05D008496 1.0e-159 566.6 278 100.0
Nitab4.5_0002050g0140 Nicotiana tabacum HOM05D006526 ORTHO05D008496 8.8e-151 537.0 294 90.8
Sopen02g038780 Solanum pennellii HOM05D006526 ORTHO05D008496 6.6e-138 494.2 289 84.8
Peaxi162Scf00420g00560 Petunia axillaris HOM05D006526 ORTHO05D008496 1.1e-137 493.4 276 88.4
Solyc02g094150.4 Solanum lycopersicum HOM05D006526 ORTHO05D008496 3.3e-137 491.9 289 84.4
CAN.G473.100 Capsicum annuum HOM05D006526 ORTHO05D008496 2.9e-125 452.2 287 79.4
Oeu005097.1 Olea europaea HOM05D006526 ORTHO05D008496 3.3e-113 412.1 237 84.0
Dinv33336 Davidia involucrata HOM05D006526 ORTHO05D008496 1.6e-112 409.8 306 68.6
Actinidia05903 Actinidia chinensis HOM05D006526 ORTHO05D008496 2.8e-112 409.1 284 72.2
MSTRG.3258 Avicennia marina HOM05D006526 ORTHO05D008496 3.1e-111 405.6 274 74.5
Rhsim10G0006300 Rhododendron simsii HOM05D006526 ORTHO05D008496 3.1e-111 405.6 274 73.7
Migut.K01466 Erythranthe guttata HOM05D006526 ORTHO05D008496 3.4e-110 402.1 269 74.0
Hma1.2p1_1278F.1_g272280 Hydrangea macrophylla HOM05D006526 ORTHO05D008496 3.4e-110 402.1 291 70.1
Actinidia36203 Actinidia chinensis HOM05D006526 ORTHO05D008496 3.8e-109 398.7 284 70.1
Cc07_g00840 Coffea canephora HOM05D006526 ORTHO05D008496 1.4e-108 396.7 287 70.7
Potri.001G330100 Populus trichocarpa HOM05D006526 ORTHO05D008496 3.9e-106 388.7 265 70.6
vmacro05958 Vaccinium macrocarpon HOM05D006526 ORTHO05D008496 8.1e-104 380.9 276 69.2
Sabra16G0211400 Salix brachista HOM05D006526 ORTHO05D008496 2.4e-103 379.4 260 70.0
Cfa007227 Carpinus fangiana HOM05D006526 ORTHO05D008496 2.6e-102 375.9 251 72.5
Lsat_1_v5_gn_2_93080 Lactuca sativa HOM05D006526 ORTHO05D008496 7.6e-102 374.4 266 68.4
Prupe.3G306300 Prunus persica HOM05D006526 ORTHO05D008496 7.6e-102 374.4 272 68.4
CiPaw.03G055600 Carya illinoinensis HOM05D006526 ORTHO05D008496 9.9e-102 374.0 280 67.9
GSVIVG01033093001 Vitis vinifera HOM05D006526 ORTHO05D008496 3.8e-101 372.1 241 75.1
COL.COLO4_13261 Corchorus olitorius HOM05D006526 ORTHO05D008496 6.4e-101 371.3 271 67.5
Duzib147G1379 Durio zibethinus HOM05D006526 ORTHO05D008496 8.4e-101 370.9 281 65.5
Manes.15G161000 Manihot esculenta HOM05D006526 ORTHO05D008496 1.1e-100 370.5 253 71.5
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 1.4e-100 370.2 304 63.5
SGA_v2.0_scaffold47G17596 Striga asiatica HOM05D006526 ORTHO05D008496 1.9e-100 369.8 297 65.3
Thecc.04G036000 Theobroma cacao HOM05D006526 ORTHO05D008496 2.4e-100 369.4 242 73.6
PGR042G1209 Punica granatum HOM05D006526 ORTHO05D008496 4.2e-100 368.6 245 72.2
Ciclev10015967m.g Citrus clementina HOM05D006526 ORTHO05D008496 2.1e-99 366.3 264 69.3
Nn4g22325 Nelumbo nucifera HOM05D006526 ORTHO05D008496 2.1e-99 366.3 266 69.5
HanXRQChr14g0450751 Helianthus annuus HOM05D006526 ORTHO05D008496 3.5e-99 365.5 271 66.4
CANSAT64G1234 Cannabis sativa HOM05D006526 ORTHO05D008496 4.6e-99 365.2 269 68.4
unitig_88.g27695 Utricularia gibba HOM05D006526 ORTHO05D008496 6.0e-99 364.8 267 68.5
SalBow7G1947 Salvia bowleyana HOM05D006526 ORTHO05D008496 7.8e-99 364.4 324 61.4
TWI56G1218 Tripterygium wilfordii HOM05D006526 ORTHO05D008496 1.7e-98 363.2 268 67.5
Eucgr.J02351 Eucalyptus grandis HOM05D006526 ORTHO05D008496 6.6e-98 361.3 243 71.6
MELO3C014888.2 Cucumis melo HOM05D006526 ORTHO05D008496 5.6e-97 358.2 290 64.1
Atru.chr6.2570 Acer truncatum HOM05D006526 ORTHO05D008496 7.3e-97 357.8 264 67.8
CsaV3_3G027000 Cucumis sativus L. HOM05D006526 ORTHO05D008496 9.6e-97 357.5 259 69.1
FvH4_6g53521 Fragaria vesca HOM05D006526 ORTHO05D008496 2.1e-96 356.3 259 68.0
Gohir.D09G036900 Gossypium hirsutum HOM05D006526 ORTHO05D008496 2.8e-96 355.9 259 68.0
ATR0561G126 Amborella trichopoda HOM05D006526 ORTHO05D008496 3.6e-96 355.5 237 73.0
RcHm_v2.0_Chr2g0175561 Rosa chinensis HOM05D006526 ORTHO05D008496 6.2e-96 354.8 248 70.6
Cpa.g.sc171.15 Carica papaya HOM05D006526 ORTHO05D008496 1.4e-95 353.6 246 68.3
ECA238G1207 Erigeron canadensis HOM05D006526 ORTHO05D008496 1.4e-95 353.6 278 62.9
Gorai.006G042000 Gossypium raimondii HOM05D006526 ORTHO05D008496 3.1e-95 352.4 259 67.6
ClCG05G013530 Citrullus lanatus HOM05D006526 ORTHO05D008496 3.4e-94 349.0 280 64.6
Glyma.19G091200 Glycine max HOM05D006526 ORTHO05D008496 4.5e-94 348.6 256 66.4
MD09G1010800 Malus domestica HOM05D006526 ORTHO05D008496 4.5e-94 348.6 248 69.8
Aa31LG5G11040 Aethionema arabicum HOM05D006526 ORTHO05D008496 5.8e-94 348.2 285 61.8
Phvul.001G093500 Phaseolus vulgaris HOM05D006526 ORTHO05D008496 5.8e-94 348.2 267 65.5
BraA01t02414Z Brassica rapa HOM05D006526 ORTHO05D008496 9.9e-94 347.4 267 64.0
THA.LOC104821121 Tarenaya hassleriana HOM05D006526 ORTHO05D008496 1.3e-93 347.1 234 69.7
A01p25030 Brassica napus HOM05D006526 ORTHO05D008496 2.9e-93 345.9 267 64.0
C01p31260 Brassica napus HOM05D006526 ORTHO05D008496 2.9e-93 345.9 267 64.0
BcaC09g49919 Brassica carinata HOM05D006526 ORTHO05D008496 4.9e-93 345.1 287 60.3
BolC1t03065H Brassica oleracea HOM05D006526 ORTHO05D008496 1.1e-92 344.0 267 63.7
BcaB05g22967 Brassica carinata HOM05D006526 ORTHO05D008496 1.4e-92 343.6 267 63.7
Lalb_Chr14g0363401 Lupinus albus HOM05D006526 ORTHO05D008496 1.4e-92 343.6 246 66.7
AT3G01920 Arabidopsis thaliana HOM05D006526 ORTHO05D008496 9.3e-92 340.9 267 61.8
AL3G10210 Arabidopsis lyrata HOM05D006526 ORTHO05D008496 1.2e-91 340.5 267 62.9
Aqoxy3G01551 Aquilegia oxysepala HOM05D006526 ORTHO05D008496 1.6e-91 340.1 237 68.4
arahy.Tifrunner.gnm1.ann1.4N5YWB Arachis hypogaea HOM05D006526 ORTHO05D008496 4.6e-91 338.6 281 59.4
Thhalv10000573m.g Eutrema salsugineum HOM05D006526 ORTHO05D008496 4.6e-91 338.6 286 60.5
arahy.Tifrunner.gnm1.ann1.C96CVE Arachis hypogaea HOM05D006526 ORTHO05D008496 7.9e-91 337.8 281 59.4
Carub.0003s0016 Capsella rubella HOM05D006526 ORTHO05D008496 4.3e-89 332.0 233 66.5
Sp3g00170 Schrenkiella parvula HOM05D006526 ORTHO05D008496 7.4e-89 331.3 268 61.2
CDE05G2481 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 1.3e-88 330.5 235 67.2
Lj1g0010270 Lotus japonicus HOM05D006526 ORTHO05D008496 1.3e-88 330.5 234 68.4
Psat3g163920 Pisum sativum HOM05D006526 ORTHO05D008496 2.9e-85 319.3 235 65.5
PSO478G2106 Papaver somniferum HOM05D006526 ORTHO05D008496 4.9e-85 318.5 236 67.8
Zm00001eb175140 Zea mays HOM05D006526 ORTHO05D008496 8.4e-85 317.8 269 59.9
PSO017G5829 Papaver somniferum HOM05D006526 ORTHO05D008496 1.1e-84 317.4 236 67.8
AUR62003516 Chenopodium quinoa HOM05D006526 ORTHO05D008496 1.9e-84 316.6 290 57.9
Os08g0531300 Oryza sativa ssp. japonica HOM05D006526 ORTHO05D008496 4.2e-84 315.5 248 62.1
CSS0009464 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 7.1e-84 314.7 217 72.8
AUR62017828 Chenopodium quinoa HOM05D006526 ORTHO05D008496 7.1e-84 314.7 297 55.9
Ah.03g147500 Amaranthus hybridus HOM05D006526 ORTHO05D008496 9.3e-84 314.3 217 68.7
CDE06G2358 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 8.7e-82 307.8 275 60.0
CARHR075020 Cardamine hirsuta HOM05D006526 ORTHO05D008496 1.1e-81 307.4 222 65.3
Haze_14876 Corylus avellana HOM05D006526 ORTHO05D008496 3.3e-81 305.8 255 61.6
Hund04346 Selenicereus undatus HOM05D006526 ORTHO05D008496 2.8e-80 302.8 287 55.7
AagrBONN_evm.TU.Sc2ySwM_228.1921 Anthoceros agrestis HOM05D006526 ORTHO05D008496 1.8e-79 300.1 284 55.6
MBI11_g23476_MAGBIO Magnolia biondii HOM05D006526 ORTHO05D008496 1.3e-77 293.9 245 62.0
Gohir.A09G035700 Gossypium hirsutum HOM05D006526 ORTHO05D008496 8.4e-77 291.2 248 60.5
PGSC0003DMG400020254 Solanum tuberosum HOM05D006526 ORTHO05D008496 4.2e-76 288.9 150 92.0
Pp3c2_22020 Physcomitrium patens HOM05D006526 ORTHO05D008496 5.1e-74 282.0 257 55.3
DCAR_000965 Daucus carota HOM05D006526 ORTHO05D008496 8.5e-69 264.6 242 58.7
Sed0022734 Sechium edule HOM05D006526 ORTHO05D008496 1.4e-68 263.8 178 70.2
VMungo1383G1669 Vigna mungo HOM05D006526 ORTHO05D008496 2.7e-67 259.6 210 62.9
FAN09G0514 Fragaria x ananassa HOM05D002875 ORTHO05D003215 7.9e-67 258.1 248 57.3
Sc16g0003120 Simmondsia chinensis HOM05D006526 ORTHO05D008496 7.9e-67 258.1 230 58.7
SMO137G0097 Selaginella moellendorffii HOM05D006526 ORTHO05D008496 2.5e-65 253.1 243 53.9
TPR.G14866 Trifolium pratense HOM05D006526 ORTHO05D008496 5.7e-65 251.9 260 52.3
TAR629G1757 Trochodendron aralioides HOM05D006526 ORTHO05D008496 1.7e-64 250.4 201 63.2
QL02p071425 Quercus lobata HOM05D006526 ORTHO05D008496 4.8e-64 248.8 150 76.7
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 1.2e-62 244.2 216 60.2
FAN05G0398 Fragaria x ananassa HOM05D002875 ORTHO05D003215 3.8e-61 239.2 193 63.7
Ca_12965_v3 Cicer arietinum L. HOM05D006526 ORTHO05D008496 1.5e-57 227.3 211 55.0
Glyma.16G056500 Glycine max HOM05D006526 ORTHO05D008496 4.1e-47 192.6 157 63.1
Cre01.g015950 Chlamydomonas reinhardtii HOM05D006526 ORTHO05D008496 3.5e-46 189.5 251 43.4
BcaB05g22970 Brassica carinata HOM05D006526 ORTHO05D008496 2.2e-45 186.8 121 71.1
ECA236G2817 Erigeron canadensis HOM05D006526 ORTHO05D008496 5.7e-41 172.2 140 62.1
MCO14G032 Micromonas commoda HOM05D006526 ORTHO05D008496 1.6e-38 164.1 209 41.1
Medtr7g034590 Medicago truncatula HOM05D006526 ORTHO05D008496 4.5e-38 162.5 123 64.2
CSS0005086 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 1.5e-28 131.0 96 67.7
QL02p071428 Quercus lobata HOM05D006526 ORTHO05D008496 6.1e-27 125.6 87 73.6
Glyma.16G056450 Glycine max HOM05D006526 ORTHO05D008496 4.4e-25 119.4 77 68.8
CDE05G0752 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 5.7e-25 119.0 116 51.7
Medtr6g045607 Medicago truncatula HOM05D006526 ORTHO05D008496 2.0e-22 110.5 89 59.6
FAN02G2201 Fragaria x ananassa HOM05D002323 ORTHO05D002470 5.2e-18 95.9 127 44.1
CDE05G3548 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 2.6e-17 93.6 59 74.6
EL10Ac8g19274 Beta vulgaris HOM05D006526 ORTHO05D008496 1.1e-15 88.2 67 65.7
Medtr6g045617 Medicago truncatula HOM05D006526 ORTHO05D008496 1.6e-14 84.3 69 60.9
Ca_12964_v3 Cicer arietinum L. HOM05D006526 ORTHO05D008496 2.7e-14 83.6 58 70.7
BcaB05g22969 Brassica carinata HOM05D006526 ORTHO05D008496 3.0e-13 80.1 55 70.9
BraA06t24956Z Brassica rapa HOM05D006526 ORTHO05D024464 3.0e-13 80.1 111 45.0
C08p24000 Brassica napus HOM05D006526 ORTHO05D024464 4.0e-10 69.7 60 60.0
BcaC07g39377 Brassica carinata HOM05D006526 ORTHO05D024464 3.4e-09 66.6 55 61.8
BolC8t50022H Brassica oleracea HOM05D006526 ORTHO05D024464 4.4e-09 66.2 51 62.7
A06p18730 Brassica napus HOM05D006526 ORTHO05D024464 2.9e-08 63.5 93 44.1
CDE04G1482 Ceratophyllum demersum HOM05D006526 ORTHO05D003215 4.9e-08 62.8 58 53.4
QL06p007766 Quercus lobata HOM05D006526 ORTHO05D008496 3.5e-06 56.6 41 63.4
Duzib168G0882 Durio zibethinus HOM05D004609 ORTHO05D005537 4.6e-06 56.2 200 29.5
VMungo1127G1456 Vigna mungo HOM05D004609 ORTHO05D005537 7.8e-06 55.5 257 26.8


User provided reference genes

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