Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010198g0030 Nicotiana tabacum HOM05D006617 ORTHO05D008247 1.2e-146 523.1 258 100.0
Nitab4.5_0029474g0010 Nicotiana tabacum HOM05D006617 ORTHO05D008247 6.4e-95 351.3 171 100.0
PGSC0003DMG400004251 Solanum tuberosum HOM05D006617 ORTHO05D008247 2.1e-93 346.3 307 64.8
CAN.G26.17 Capsicum annuum HOM05D006617 ORTHO05D008247 2.5e-91 339.3 307 61.6
Solyc12g056350.2 Solanum lycopersicum HOM05D006617 ORTHO05D008247 1.6e-90 336.7 307 62.5
Sopen12g028920 Solanum pennellii HOM05D006617 ORTHO05D008247 3.1e-89 332.4 307 62.5
Peaxi162Scf01294g00327 Petunia axillaris HOM05D006617 ORTHO05D008247 2.2e-79 299.7 219 72.1
Nitab4.5_0000360g0080 Nicotiana tabacum HOM05D006617 ORTHO05D008247 4.2e-70 268.9 287 57.1
GSVIVG01019803001 Vitis vinifera HOM05D006617 ORTHO05D008247 3.4e-64 249.2 306 47.7
Migut.A00797 Erythranthe guttata HOM05D006617 ORTHO05D008247 6.4e-63 245.0 311 47.9
Lj8A235T58 Lonicera japonica HOM05D006617 ORTHO05D008247 2.1e-61 240.0 327 45.3
SalBow6G1063 Salvia bowleyana HOM05D006617 ORTHO05D008247 3.5e-61 239.2 242 52.9
CiPaw.11G138400 Carya illinoinensis HOM05D006617 ORTHO05D008247 6.0e-61 238.4 244 53.3
Actinidia14540 Actinidia chinensis HOM05D006617 ORTHO05D008247 1.3e-60 237.3 248 52.0
CSS0023405 Camellia sinensis var. sinensis HOM05D006617 ORTHO05D008247 6.7e-60 235.0 248 52.4
Dinv38979 Davidia involucrata HOM05D006617 ORTHO05D008247 1.1e-59 234.2 232 54.7
QL12p017915 Quercus lobata HOM05D006617 ORTHO05D008247 3.3e-59 232.6 246 50.0
Prupe.5G095100 Prunus persica HOM05D006617 ORTHO05D008247 7.4e-59 231.5 248 50.8
Cc08_g14300 Coffea canephora HOM05D006617 ORTHO05D008247 2.8e-58 229.6 224 57.1
Nn6g33542 Nelumbo nucifera HOM05D006617 ORTHO05D008247 4.8e-58 228.8 287 48.1
RcHm_v2.0_Chr7g0198641 Rosa chinensis HOM05D006617 ORTHO05D008247 8.1e-58 228.0 276 47.8
TWI36G1290 Tripterygium wilfordii HOM05D006617 ORTHO05D008247 1.4e-57 227.3 242 51.7
FAN04G2914 Fragaria x ananassa HOM05D006617 ORTHO05D008247 2.4e-57 226.5 248 50.8
Ciclev10016122m.g Citrus clementina HOM05D006617 ORTHO05D008247 3.1e-57 226.1 290 45.2
MD06G1077000 Malus domestica HOM05D006617 ORTHO05D008247 4.0e-57 225.7 246 50.0
VMungo0251G0775 Vigna mungo HOM05D006617 ORTHO05D008247 5.3e-57 225.3 251 48.2
Thecc.02G366400 Theobroma cacao HOM05D006617 ORTHO05D008247 2.0e-56 223.4 248 47.2
Phvul.002G287200 Phaseolus vulgaris HOM05D006617 ORTHO05D008247 5.8e-56 221.9 244 49.2
Medtr8g096960 Medicago truncatula HOM05D006617 ORTHO05D008247 1.0e-55 221.1 281 45.6
Atru.chr6.3216 Acer truncatum HOM05D006617 ORTHO05D008247 1.3e-55 220.7 302 45.0
COL.COLO4_11251 Corchorus olitorius HOM05D006617 ORTHO05D008247 2.2e-55 219.9 272 45.2
Duzib251G0852 Durio zibethinus HOM05D006617 ORTHO05D008247 1.1e-54 217.6 266 44.7
TPR.G12841 Trifolium pratense HOM05D006617 ORTHO05D008247 1.1e-54 217.6 287 44.6
Cpa.g.sc39.21 Carica papaya HOM05D006617 ORTHO05D008247 1.9e-54 216.9 274 45.6
DCAR_008412 Daucus carota HOM05D006617 ORTHO05D008247 2.5e-54 216.5 248 51.6
Glyma.08G012200 Glycine max HOM05D006617 ORTHO05D008247 3.2e-54 216.1 248 48.0
Hma1.2p1_0514F.1_g169800 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 3.2e-54 216.1 249 50.2
Glyma.05G205300 Glycine max HOM05D006617 ORTHO05D008247 7.1e-54 214.9 248 46.8
Psat7g035840 Pisum sativum HOM05D006617 ORTHO05D008247 7.1e-54 214.9 287 46.3
Ca_17553_v3 Cicer arietinum L. HOM05D006617 ORTHO05D008247 9.3e-54 214.5 276 43.8
HanXRQChr12g0384501 Helianthus annuus HOM05D006617 ORTHO05D008247 9.3e-54 214.5 248 48.4
ECA233G3703 Erigeron canadensis HOM05D006617 ORTHO05D008247 3.5e-53 212.6 241 48.1
Sc22g0000340 Simmondsia chinensis HOM05D006617 ORTHO05D008247 3.5e-53 212.6 244 49.2
CsaV3_4G006040 Cucumis sativus L. HOM05D006617 ORTHO05D008247 4.6e-53 212.2 288 43.8
Ah.12g057360 Amaranthus hybridus HOM05D006617 ORTHO05D008247 1.0e-52 211.1 301 42.5
Lsat_1_v5_gn_6_6941 Lactuca sativa HOM05D006617 ORTHO05D008247 1.3e-52 210.7 246 47.2
Lj4g0017727 Lotus japonicus HOM05D006617 ORTHO05D008247 1.3e-52 210.7 290 44.8
Potri.014G154900 Populus trichocarpa HOM05D006617 ORTHO05D008247 1.8e-52 210.3 247 47.8
FAN13G2116 Fragaria x ananassa HOM05D006617 ORTHO05D008247 2.3e-52 209.9 241 49.0
THA.LOC104800995 Tarenaya hassleriana HOM05D006617 ORTHO05D008247 5.1e-52 208.8 255 45.5
Manes.12G073000 Manihot esculenta HOM05D006617 ORTHO05D008247 6.7e-52 208.4 239 48.1
Lalb_Chr05g0224971 Lupinus albus HOM05D006617 ORTHO05D008247 1.1e-51 207.6 246 47.6
MELO3C016345.2 Cucumis melo HOM05D006617 ORTHO05D008247 1.5e-51 207.2 288 43.4
Eucgr.D01883 Eucalyptus grandis HOM05D006617 ORTHO05D008247 4.3e-51 205.7 245 46.1
TAR375G0379 Trochodendron aralioides HOM05D006617 ORTHO05D008247 1.3e-50 204.1 206 55.8
AL4G27880 Arabidopsis lyrata HOM05D006617 ORTHO05D008247 6.3e-50 201.8 251 44.2
FAN18G0570 Fragaria x ananassa HOM05D006617 ORTHO05D008247 6.3e-50 201.8 185 57.3
Sed0011813 Sechium edule HOM05D006617 ORTHO05D008247 6.3e-50 201.8 227 48.0
arahy.Tifrunner.gnm1.ann1.164QK4 Arachis hypogaea HOM05D006617 ORTHO05D008247 8.2e-50 201.4 282 42.6
arahy.Tifrunner.gnm1.ann1.90PEWX Arachis hypogaea HOM05D006617 ORTHO05D008247 8.2e-50 201.4 282 42.6
Carub.0004s1384 Capsella rubella HOM05D006617 ORTHO05D008247 8.2e-50 201.4 251 44.6
Haze_08908 Corylus avellana HOM05D006617 ORTHO05D008247 1.1e-49 201.1 179 57.0
PSO478G3588 Papaver somniferum HOM05D006617 ORTHO05D008247 1.1e-49 201.1 272 45.2
Haze_08904 Corylus avellana HOM05D006617 ORTHO05D008247 1.4e-49 200.7 179 57.0
EL10Ac5g12764 Beta vulgaris HOM05D006617 ORTHO05D008247 1.8e-49 200.3 226 50.4
PSO782G1088 Papaver somniferum HOM05D006617 ORTHO05D008247 2.4e-49 199.9 226 50.4
FvH4_5g01880 Fragaria vesca HOM05D006617 ORTHO05D008247 4.1e-49 199.1 185 56.8
Gohir.D12G177000 Gossypium hirsutum HOM05D006617 ORTHO05D008247 1.2e-48 197.6 248 44.4
Gorai.008G189400 Gossypium raimondii HOM05D006617 ORTHO05D008247 1.2e-48 197.6 248 44.4
Thhalv10017053m.g Eutrema salsugineum HOM05D006617 ORTHO05D008247 2.0e-48 196.8 255 42.0
Gohir.A12G174300 Gossypium hirsutum HOM05D006617 ORTHO05D008247 2.0e-48 196.8 248 44.4
FAN08G3651 Fragaria x ananassa HOM05D006617 ORTHO05D008247 2.2e-47 193.4 185 55.7
AUR62017243 Chenopodium quinoa HOM05D006617 ORTHO05D008247 1.1e-46 191.0 177 54.8
SGA_v2.0_scaffold146G36248 Striga asiatica HOM05D006617 ORTHO05D008247 1.4e-46 190.7 179 55.3
Aa31LG5G4800 Aethionema arabicum HOM05D006617 ORTHO05D008247 3.2e-46 189.5 290 41.0
PGR031G1807 Punica granatum HOM05D006617 ORTHO05D008247 4.2e-46 189.1 236 46.2
BcaB01g03976 Brassica carinata HOM05D006617 ORTHO05D008247 1.2e-45 187.6 256 40.6
Sp4g14850 Schrenkiella parvula HOM05D006617 ORTHO05D008247 1.2e-45 187.6 251 40.6
Sabra14G0117100 Salix brachista HOM05D006617 ORTHO05D008247 3.5e-45 186.0 180 53.9
A03p18190 Brassica napus HOM05D006617 ORTHO05D008247 7.9e-45 184.9 257 40.9
BraA03t11079Z Brassica rapa HOM05D006617 ORTHO05D008247 7.9e-45 184.9 257 40.9
Hund11496 Selenicereus undatus HOM05D006617 ORTHO05D008247 7.9e-45 184.9 177 53.1
BcaC01g05904 Brassica carinata HOM05D006617 ORTHO05D008247 3.9e-44 182.6 257 40.1
C03p21220 Brassica napus HOM05D006617 ORTHO05D008247 1.5e-43 180.6 257 39.7
BolC3t14504H Brassica oleracea HOM05D006617 ORTHO05D008247 1.5e-43 180.6 257 39.7
Os03g0110900 Oryza sativa ssp. japonica HOM05D006617 ORTHO05D008247 1.3e-42 177.6 252 40.1
AUR62010601 Chenopodium quinoa HOM05D000030 ORTHO05D008247 1.1e-41 174.5 160 56.2
Zm00001eb404120 Zea mays HOM05D006617 ORTHO05D008247 2.4e-41 173.3 226 42.0
ATR0680G238 Amborella trichopoda HOM05D006617 ORTHO05D008247 4.1e-41 172.6 226 42.5
AT2G32500 Arabidopsis thaliana HOM05D006617 ORTHO05D008247 9.0e-41 171.4 188 48.9
HPP92_004974 Vanilla planifolia HOM05D006617 ORTHO05D008247 7.7e-40 168.3 246 39.4
MSTRG.12003 Avicennia marina HOM05D006617 ORTHO05D008247 2.5e-35 153.3 167 48.5
Hma1.2p1_3255F.1_g334560 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 9.7e-35 151.4 164 51.8
ClCG07G007980 Citrullus lanatus HOM05D006617 ORTHO05D008247 9.1e-33 144.8 186 44.6
MBI18_g01147_MAGBIO Magnolia biondii HOM05D006617 ORTHO05D008247 1.5e-32 144.1 190 44.7
SEGI_22684 Sequoiadendron giganteum HOM05D006617 ORTHO05D008247 6.5e-31 138.7 224 37.9
Aqoxy7G00383 Aquilegia oxysepala HOM05D006617 ORTHO05D008247 2.5e-30 136.7 92 68.5
Oeu025101.1 Olea europaea HOM05D006617 ORTHO05D008247 4.7e-29 132.5 165 48.5
Actinidia02025 Actinidia chinensis HOM05D006617 ORTHO05D008247 5.3e-25 119.0 182 41.2
SMO329G0076 Selaginella moellendorffii HOM05D006617 ORTHO05D008247 9.4e-22 108.2 164 38.4
AUR62042944 Chenopodium quinoa HOM05D006617 ORTHO05D008247 1.0e-20 104.8 111 46.8
AagrBONN_evm.TU.Sc2ySwM_228.4793 Anthoceros agrestis HOM05D006617 ORTHO05D008247 5.7e-19 99.0 226 30.5
Pp3c20_8200 Physcomitrium patens HOM05D006617 ORTHO05D008247 5.3e-17 92.4 162 34.6
Aqoxy7G00382 Aquilegia oxysepala HOM05D006617 ORTHO05D008247 3.8e-15 86.3 128 41.4
Lsat_1_v5_gn_8_1081 Lactuca sativa HOM05D006617 ORTHO05D008247 2.3e-12 77.0 77 54.5
CARHR126330 Cardamine hirsuta HOM05D006617 ORTHO05D008247 1.5e-11 74.3 114 36.0
Mapoly0086s0010 Marchantia polymorpha HOM05D006617 ORTHO05D008247 1.3e-10 71.2 232 23.3
Pp3c7_1410 Physcomitrium patens HOM05D006617 ORTHO05D008247 6.3e-10 68.9 91 36.3
CAN.G1231.36 Capsicum annuum HOM05D006617 ORTHO05D008247 1.6e-08 64.3 46 69.6
CDE06G1437 Ceratophyllum demersum HOM05D006617 ORTHO05D008247 1.6e-08 64.3 53 60.4
Mapoly0086s0005 Marchantia polymorpha HOM05D006617 ORTHO05D008247 4.5e-08 62.8 162 27.2
CBR_g57728 Chara braunii HOM05D006617 ORTHO05D008247 1.1e-06 58.2 92 37.0
MBI19_g11841_MAGBIO Magnolia biondii HOM05D003252 ORTHO05D003640 5.5e-06 55.8 190 28.4


User provided reference genes

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