Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 0.0e+00 1609.0 823 100.0
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 0.0e+00 1528.8 823 95.3
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 0.0e+00 1439.1 823 89.6
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 0.0e+00 1430.2 823 88.8
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 0.0e+00 1427.2 823 88.8
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 0.0e+00 1409.0 822 88.2
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 7.6e-291 1003.8 802 65.1
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 2.5e-286 988.8 825 63.0
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 6.2e-285 984.2 831 62.2
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 8.1e-285 983.8 823 62.1
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 4.4e-283 978.0 830 61.4
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 7.6e-283 977.2 828 61.0
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 1.3e-282 976.5 826 61.7
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 2.4e-281 972.2 824 61.0
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 5.1e-279 964.5 828 60.6
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 3.6e-277 958.4 825 62.5
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 8.4e-274 947.2 800 60.8
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 5.4e-273 944.5 830 60.1
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 4.3e-270 934.9 830 59.6
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 8.1e-269 930.6 830 59.4
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 1.4e-268 929.9 829 59.5
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 3.4e-267 925.2 833 59.7
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 5.8e-267 924.5 823 58.9
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 7.6e-267 924.1 824 59.3
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 7.6e-267 924.1 798 60.0
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 1.3e-266 923.3 830 59.2
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 4.9e-266 921.4 826 59.8
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 4.9e-266 921.4 798 59.9
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 4.2e-265 918.3 803 59.8
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 7.1e-265 917.5 800 60.5
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 1.6e-264 916.4 794 59.3
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 2.5e-262 909.1 796 59.5
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 3.3e-262 908.7 811 59.4
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 4.3e-262 908.3 806 58.4
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 9.6e-262 907.1 825 57.6
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 1.6e-261 906.4 796 60.1
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 2.8e-261 905.6 829 57.1
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 3.7e-261 905.2 833 57.5
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 4.8e-261 904.8 796 59.7
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 6.2e-261 904.4 796 59.9
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 1.9e-257 892.9 831 56.8
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 3.9e-255 885.2 834 56.6
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 1.5e-254 883.2 816 56.6
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.5e-254 882.5 814 57.0
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.3e-253 880.2 814 56.9
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 5.3e-252 874.8 812 56.3
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 4.5e-251 871.7 793 57.9
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 9.3e-249 864.0 833 54.7
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 2.1e-248 862.8 832 54.4
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 3.0e-247 859.0 831 55.0
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 1.7e-242 843.2 832 53.2
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 4.2e-241 838.6 802 54.6
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 9.4e-241 837.4 802 54.7
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 2.1e-240 836.3 822 53.8
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 2.1e-240 836.3 832 53.5
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 3.9e-239 832.0 837 53.2
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 2.2e-237 826.2 796 54.9
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 5.9e-235 818.1 748 57.2
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 5.9e-235 818.1 843 52.2
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 7.7e-235 817.8 762 58.1
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 5.0e-234 815.1 832 52.6
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 1.9e-233 813.1 823 54.3
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 7.2e-233 811.2 835 53.2
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 3.0e-231 805.8 831 53.3
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 7.4e-230 801.2 803 54.0
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 9.1e-228 794.3 817 52.5
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 5.9e-227 791.6 835 54.1
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 7.2e-225 784.6 795 55.1
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 1.0e-223 780.8 837 52.4
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 3.3e-222 775.8 805 53.4
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 1.7e-221 773.5 648 61.7
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 7.7e-219 764.6 830 50.5
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 1.3e-218 763.8 831 49.3
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 1.3e-218 763.8 832 50.4
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 3.2e-217 759.2 740 54.3
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 7.2e-217 758.1 807 51.2
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 2.7e-216 756.1 740 54.2
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 2.3e-215 753.1 832 49.6
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 5.2e-215 751.9 835 50.7
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 1.7e-213 746.9 831 49.6
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 1.1e-212 744.2 838 50.5
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 2.4e-212 743.0 824 49.9
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 9.1e-212 741.1 830 49.3
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 3.5e-211 739.2 607 63.4
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 1.3e-210 737.3 798 50.5
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 1.7e-210 736.9 829 49.7
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 6.5e-210 734.9 819 50.3
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 1.0e-207 727.6 804 50.2
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 2.0e-203 713.4 817 48.3
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 1.4e-199 700.7 835 48.5
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 5.0e-186 655.6 607 56.3
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 8.1e-184 648.3 812 44.8
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.8e-175 620.5 549 61.4
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 2.3e-170 603.6 747 48.6
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 2.0e-166 590.5 797 43.5
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 1.7e-165 587.4 608 52.0
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.3e-157 561.2 478 60.0
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 2.5e-153 547.0 579 50.6
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 2.9e-149 533.5 424 65.6
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 4.2e-140 503.1 811 39.1
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 5.1e-130 469.5 806 41.4
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 4.5e-126 456.4 522 48.9
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 5.0e-117 426.4 354 62.1
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.2e-101 374.4 290 66.9
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 2.3e-98 364.4 275 66.5
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 4.8e-96 356.7 483 47.0
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 1.1e-92 345.5 909 29.4
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 7.0e-87 326.2 881 28.7
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 4.5e-86 323.6 316 57.0
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 8.3e-80 302.8 225 69.8
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 5.6e-68 263.5 808 27.8
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 8.9e-66 256.1 223 61.0
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 8.9e-58 229.6 236 52.1
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 7.1e-55 219.9 532 28.4
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 9.2e-55 219.5 361 34.6
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 7.3e-52 209.9 584 31.3
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 2.2e-48 198.4 225 49.8
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 3.4e-25 121.3 214 42.1
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 3.9e-21 107.8 71 70.4
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 1.1e-15 89.7 628 22.6


User provided reference genes

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