Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.8e-111 406.0 218 100.0
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 5.6e-100 367.9 218 90.8
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.9e-95 352.8 240 78.8
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 4.6e-94 348.2 240 77.9
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 3.4e-89 332.0 208 82.2
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 1.9e-71 273.1 177 76.8
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 2.4e-71 272.7 175 77.1
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 3.2e-71 272.3 177 76.3
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 5.4e-71 271.6 236 65.3
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 9.3e-71 270.8 175 77.1
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 1.6e-70 270.0 176 75.6
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 2.1e-70 269.6 236 63.1
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 2.1e-70 269.6 174 76.4
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 2.1e-70 269.6 175 78.3
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 2.7e-70 269.2 175 74.9
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 6.0e-70 268.1 175 74.9
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 1.0e-69 267.3 174 75.3
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.0e-69 267.3 175 76.0
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.3e-69 266.9 243 61.7
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 1.7e-69 266.5 175 73.7
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 2.3e-69 266.2 174 75.9
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 3.0e-69 265.8 175 73.7
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 3.9e-69 265.4 243 61.3
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 5.1e-69 265.0 174 75.3
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 6.6e-69 264.6 176 75.6
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 6.6e-69 264.6 174 74.7
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 1.1e-68 263.8 175 75.4
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 1.5e-68 263.5 236 61.9
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 1.5e-68 263.5 236 61.4
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 4.3e-68 261.9 174 73.0
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 5.6e-68 261.5 173 72.8
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 7.3e-68 261.2 174 75.9
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 7.3e-68 261.2 209 65.6
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 1.3e-67 260.4 175 75.4
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 1.3e-67 260.4 225 62.7
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 1.6e-67 260.0 176 73.3
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 2.1e-67 259.6 174 73.0
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 2.1e-67 259.6 177 74.0
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 2.8e-67 259.2 249 57.8
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 2.8e-67 259.2 175 74.3
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 4.8e-67 258.5 174 75.3
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 4.8e-67 258.5 174 73.0
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 1.1e-66 257.3 174 73.0
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 1.4e-66 256.9 226 61.5
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 1.8e-66 256.5 176 73.3
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 2.4e-66 256.1 166 76.5
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 2.4e-66 256.1 176 72.2
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 2.4e-66 256.1 209 64.6
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 5.3e-66 255.0 232 59.1
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 6.9e-66 254.6 173 75.1
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 6.9e-66 254.6 174 72.4
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 6.9e-66 254.6 173 74.0
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 9.0e-66 254.2 236 60.2
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 2.0e-65 253.1 175 68.6
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 2.6e-65 252.7 173 73.4
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 4.5e-65 251.9 238 58.0
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 4.5e-65 251.9 176 75.0
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.7e-64 250.0 176 69.9
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 6.4e-64 248.1 226 61.1
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 6.4e-64 248.1 175 66.9
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 1.1e-63 247.3 179 71.5
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 1.1e-63 247.3 223 61.0
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 1.4e-63 246.9 216 61.1
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 1.4e-63 246.9 243 56.8
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.4e-63 246.9 175 69.7
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 2.4e-63 246.1 176 68.2
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 3.2e-63 245.7 175 67.4
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 3.2e-63 245.7 175 68.0
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 3.2e-63 245.7 175 68.0
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 9.3e-63 244.2 173 72.8
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 1.2e-62 243.8 175 68.0
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 2.1e-62 243.0 176 68.2
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 3.5e-62 242.3 174 68.4
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 4.6e-62 241.9 175 67.4
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 6.0e-62 241.5 224 57.1
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 1.3e-61 240.4 221 58.8
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 1.3e-61 240.4 175 66.9
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 2.3e-61 239.6 175 69.1
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 3.0e-61 239.2 175 68.0
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 6.7e-61 238.0 156 76.9
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 1.1e-60 237.3 175 67.4
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.9e-60 236.5 219 58.9
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 2.5e-60 236.1 189 67.2
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 2.5e-60 236.1 175 66.3
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 7.4e-60 234.6 238 57.6
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 9.6e-60 234.2 253 53.4
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 8.1e-59 231.1 228 56.1
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 1.1e-58 230.7 241 56.0
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 1.1e-58 230.7 173 66.5
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.4e-58 230.3 174 66.1
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 3.1e-58 229.2 174 67.2
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 9.0e-58 227.6 174 64.9
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 2.6e-57 226.1 187 62.0
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 2.1e-54 216.5 174 62.1
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 2.5e-52 209.5 234 53.0
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 8.1e-51 204.5 176 56.2
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 1.1e-50 204.1 213 53.5
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 4.5e-49 198.7 174 60.9
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 3.3e-44 182.6 176 58.0
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 2.6e-41 172.9 178 48.9
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 3.8e-40 169.1 112 75.9
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 1.6e-38 163.7 163 57.7
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.5e-36 157.1 160 57.5
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 1.6e-35 153.7 108 72.2
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 3.4e-33 146.0 128 68.0
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 4.5e-33 145.6 88 79.5
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 8.5e-32 141.4 110 60.0
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 4.6e-30 135.6 86 76.7
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 2.2e-27 126.7 140 52.1
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.8e-26 123.6 101 64.4
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 3.1e-26 122.9 69 87.0
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 4.5e-25 119.0 81 76.5
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 1.0e-24 117.9 91 64.8
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 2.9e-24 116.3 128 55.5
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 1.4e-23 114.0 112 54.5
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 3.2e-23 112.8 110 58.2
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 9.4e-23 111.3 72 70.8
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 6.7e-21 105.1 64 76.6
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 2.6e-20 103.2 65 73.8
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 2.8e-19 99.8 79 60.8
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 6.3e-19 98.6 65 70.8
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.1e-18 97.8 127 44.1
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 5.9e-17 92.0 67 67.2
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 1.3e-11 74.3 52 71.2


User provided reference genes

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