Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010125g0030 Nicotiana tabacum HOM05D006043 ORTHO05D007309 2.2e-82 308.9 154 100.0
Peaxi162Scf00412g00063 Petunia axillaris HOM05D006043 ORTHO05D007309 2.2e-66 255.8 153 83.7
Nitab4.5_0001922g0090 Nicotiana tabacum HOM05D006043 ORTHO05D007309 3.3e-62 241.9 153 85.0
Sopen09g003740 Solanum pennellii HOM05D006043 ORTHO05D007309 5.5e-62 241.1 153 80.4
Solyc09g008980.2 Solanum lycopersicum HOM05D006043 ORTHO05D007309 1.6e-61 239.6 153 79.7
PGSC0003DMG400002723 Solanum tuberosum HOM05D006043 ORTHO05D007309 1.6e-53 213.0 153 72.5
Cc00_g32800 Coffea canephora HOM05D006043 ORTHO05D007309 6.4e-50 201.1 148 70.3
Oeu040545.1 Olea europaea HOM05D006043 ORTHO05D007309 4.1e-49 198.4 152 66.4
Cc00_g05260 Coffea canephora HOM05D006043 ORTHO05D007309 1.1e-44 183.7 148 66.2
Prupe.7G119300 Prunus persica HOM05D006043 ORTHO05D007309 1.8e-44 183.0 156 59.0
Atru.chr8.1654 Acer truncatum HOM05D006043 ORTHO05D007309 5.2e-44 181.4 154 61.0
HanXRQChr09g0259401 Helianthus annuus HOM05D006043 ORTHO05D007309 1.2e-43 180.3 147 61.9
Lalb_Chr20g0112261 Lupinus albus HOM05D006043 ORTHO05D007309 2.0e-43 179.5 154 58.4
FAN02G0054 Fragaria x ananassa HOM05D006043 ORTHO05D007309 1.7e-42 176.4 156 60.3
TPR.G7024 Trifolium pratense HOM05D006043 ORTHO05D007309 2.2e-42 176.0 153 60.1
Cfa016525 Carpinus fangiana HOM05D006043 ORTHO05D007309 3.7e-42 175.3 152 61.8
FvH4_6g17700 Fragaria vesca HOM05D006043 ORTHO05D007309 3.7e-42 175.3 157 60.5
Lj1g0027910 Lotus japonicus HOM05D006043 ORTHO05D007309 6.4e-42 174.5 154 60.4
Aqoxy1G00961 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 8.3e-42 174.1 149 58.4
MD14G1014200 Malus domestica HOM05D006043 ORTHO05D007309 8.3e-42 174.1 154 58.4
Ca_08959_v3 Cicer arietinum L. HOM05D006043 ORTHO05D007309 1.4e-41 173.3 155 59.4
RcHm_v2.0_Chr3g0471911 Rosa chinensis HOM05D006043 ORTHO05D007309 1.4e-41 173.3 156 58.3
Medtr7g103520 Medicago truncatula HOM05D006043 ORTHO05D007309 1.9e-41 172.9 154 60.4
vmacro12136 Vaccinium macrocarpon HOM05D006043 ORTHO05D007309 3.2e-41 172.2 152 54.6
MD12G1016000 Malus domestica HOM05D006043 ORTHO05D007309 5.4e-41 171.4 149 58.4
VMungo1383G3657 Vigna mungo HOM05D006043 ORTHO05D007309 5.4e-41 171.4 154 61.7
Cpa.g.sc5.89 Carica papaya HOM05D006043 ORTHO05D007309 7.1e-41 171.0 153 59.5
Manes.08G019800 Manihot esculenta HOM05D006043 ORTHO05D007309 7.1e-41 171.0 152 59.9
QL07p040748 Quercus lobata HOM05D006043 ORTHO05D007309 1.2e-40 170.2 149 61.7
Rhsim06G0171100 Rhododendron simsii HOM05D006043 ORTHO05D007309 1.2e-40 170.2 152 55.9
CiPaw.10G004600 Carya illinoinensis HOM05D006043 ORTHO05D007309 2.1e-40 169.5 153 58.8
Haze_19524 Corylus avellana HOM05D006043 ORTHO05D007309 1.7e-39 166.4 152 57.9
Phvul.001G185700 Phaseolus vulgaris HOM05D006043 ORTHO05D007309 1.7e-39 166.4 154 61.0
Glyma.03G190100 Glycine max HOM05D006043 ORTHO05D007309 5.6e-38 161.4 152 59.2
Glyma.19G190400 Glycine max HOM05D006043 ORTHO05D007309 9.5e-38 160.6 154 57.1
Eucgr.A01560 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.6e-37 159.8 119 64.7
CANSAT80G1206 Cannabis sativa HOM05D006043 ORTHO05D007309 2.1e-37 159.5 154 55.2
CsaV3_3G036730 Cucumis sativus L. HOM05D006043 ORTHO05D007309 1.1e-36 157.1 152 59.2
Gohir.A04G066428 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.1e-36 157.1 142 57.7
Duzib093G0521 Durio zibethinus HOM05D006043 ORTHO05D007309 3.1e-36 155.6 158 56.3
Gohir.D04G105000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 3.1e-36 155.6 150 56.0
Gorai.009G408700 Gossypium raimondii HOM05D006043 ORTHO05D007309 3.1e-36 155.6 150 56.0
Duzib106G1072 Durio zibethinus HOM05D006043 ORTHO05D007309 5.2e-36 154.8 158 53.8
Potri.013G014300 Populus trichocarpa HOM05D006043 ORTHO05D007309 6.8e-36 154.5 153 56.9
ClCG10G019450 Citrullus lanatus HOM05D006043 ORTHO05D007309 8.9e-36 154.1 152 57.2
Psat3g036320 Pisum sativum HOM05D006043 ORTHO05D007309 1.2e-35 153.7 108 67.6
Gorai.006G158600 Gossypium raimondii HOM05D006043 ORTHO05D007309 5.8e-35 151.4 151 52.3
Ciclev10013017m.g Citrus clementina HOM05D006043 ORTHO05D007309 7.6e-35 151.0 153 53.6
Dinv21268 Davidia involucrata HOM05D006043 ORTHO05D007309 7.6e-35 151.0 145 55.2
MELO3C009427.2 Cucumis melo HOM05D006043 ORTHO05D007309 9.9e-35 150.6 152 55.9
Gohir.D09G138000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 3.7e-34 148.7 151 51.7
CSS0040940 Camellia sinensis var. sinensis HOM05D006043 ORTHO05D007309 8.4e-34 147.5 158 50.6
Lsat_1_v5_gn_2_22321 Lactuca sativa HOM05D006043 ORTHO05D007309 8.4e-34 147.5 143 55.2
Eucgr.K02384 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.9e-33 146.4 152 50.0
Eucgr.K02410 Eucalyptus grandis HOM05D006043 ORTHO05D007309 5.4e-33 144.8 152 49.3
COL.COLO4_29832 Corchorus olitorius HOM05D006043 ORTHO05D007309 7.1e-33 144.4 155 52.3
PSO384G2483 Papaver somniferum HOM05D006043 ORTHO05D007309 7.1e-33 144.4 150 52.0
Peaxi162Scf00412g00073 Petunia axillaris HOM05D006043 ORTHO05D007309 9.2e-33 144.1 150 50.7
Eucgr.K02399 Eucalyptus grandis HOM05D006043 ORTHO05D007309 2.1e-32 142.9 152 48.7
Nn2g13971 Nelumbo nucifera HOM05D006043 ORTHO05D007309 7.8e-32 141.0 118 62.7
Eucgr.K02389 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.7e-31 139.8 152 48.0
MBI01_g32535_MAGBIO Magnolia biondii HOM05D006043 ORTHO05D007309 3.9e-31 138.7 138 52.9
Gohir.A09G136312 Gossypium hirsutum HOM05D006043 ORTHO05D007309 5.1e-31 138.3 161 47.8
Cc06_g05110 Coffea canephora HOM05D006043 ORTHO05D007309 6.6e-31 137.9 145 48.3
ECA126G0006 Erigeron canadensis HOM05D006043 ORTHO05D007309 3.3e-30 135.6 101 65.3
C05p58050 Brassica napus HOM05D002004 ORTHO05D002089 5.6e-30 134.8 144 52.8
BolC5t34462H Brassica oleracea HOM05D006043 ORTHO05D007309 5.6e-30 134.8 144 52.8
BraA05t22694Z Brassica rapa HOM05D006043 ORTHO05D007309 5.6e-30 134.8 146 52.1
A05p39030 Brassica napus HOM05D006043 ORTHO05D007309 2.1e-29 132.9 146 50.7
Sc07g0005350 Simmondsia chinensis HOM05D006043 ORTHO05D007309 3.6e-29 132.1 150 49.3
TWI53G1797 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 4.7e-29 131.7 108 60.2
Nitab4.5_0010125g0040 Nicotiana tabacum HOM05D006043 ORTHO05D007309 8.1e-29 131.0 125 52.0
Sed0027852 Sechium edule HOM05D006043 ORTHO05D007309 8.1e-29 131.0 119 58.8
Oeu030483.1 Olea europaea HOM05D006043 ORTHO05D007309 1.1e-28 130.6 149 48.3
DCAR_009167 Daucus carota HOM05D006043 ORTHO05D007309 1.8e-28 129.8 142 48.6
BcaC05g29726 Brassica carinata HOM05D006043 ORTHO05D007309 5.2e-28 128.3 153 47.7
AL3G21330 Arabidopsis lyrata HOM05D006043 ORTHO05D007309 8.9e-28 127.5 147 53.7
Sp3g08330 Schrenkiella parvula HOM05D006043 ORTHO05D007309 8.9e-28 127.5 147 51.0
EL10Ac7g17005 Beta vulgaris HOM05D006043 ORTHO05D007309 1.2e-27 127.1 149 48.3
Ah.08g211020 Amaranthus hybridus HOM05D006043 ORTHO05D007309 1.5e-27 126.7 149 51.0
Carub.0003s0912 Capsella rubella HOM05D006043 ORTHO05D007309 2.0e-27 126.3 149 51.0
PGR004G1627 Punica granatum HOM05D006043 ORTHO05D007309 2.0e-27 126.3 136 50.0
AT3G10020 Arabidopsis thaliana HOM05D006043 ORTHO05D007309 7.6e-27 124.4 147 52.4
TWI13G0012 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 2.9e-26 122.5 150 50.0
TWI74G0769 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 2.9e-26 122.5 150 50.0
Thhalv10021699m.g Eutrema salsugineum HOM05D006043 ORTHO05D007309 4.9e-26 121.7 147 49.0
Lj2P127T74 Lonicera japonica HOM05D006043 ORTHO05D007309 6.4e-26 121.3 134 49.3
CARHR084520 Cardamine hirsuta HOM05D006043 ORTHO05D007309 1.1e-25 120.6 147 48.3
Aa31LG3G2550 Aethionema arabicum HOM05D006043 ORTHO05D007309 1.9e-25 119.8 146 47.3
SalBow3G1044 Salvia bowleyana HOM05D006043 ORTHO05D007309 2.4e-25 119.4 148 44.6
SGA_v2.0_scaffold40G15419 Striga asiatica HOM05D006043 ORTHO05D007309 3.2e-25 119.0 149 45.6
BcaB03g11578 Brassica carinata HOM05D006043 ORTHO05D007309 4.6e-24 115.2 152 46.7
CAN.G824.34 Capsicum annuum HOM05D006043 ORTHO05D007309 4.6e-24 115.2 125 44.8
PGSC0003DMG400002724 Solanum tuberosum HOM05D006043 ORTHO05D007309 1.0e-23 114.0 132 48.5
BraA03t12747Z Brassica rapa HOM05D006043 ORTHO05D007309 3.0e-23 112.5 147 48.3
Nn6g35076 Nelumbo nucifera HOM05D006043 ORTHO05D007309 3.9e-23 112.1 146 45.2
A03p35730 Brassica napus HOM05D006043 ORTHO05D007309 8.7e-23 110.9 142 47.9
Aqoxy2G01470 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 1.1e-22 110.5 128 46.1
Thecc.05G079900 Theobroma cacao HOM05D006043 ORTHO05D007309 1.5e-22 110.2 158 44.9
Prupe.7G091800 Prunus persica HOM05D006043 ORTHO05D007309 7.3e-22 107.8 81 64.2
THA.LOC104816380 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 1.3e-21 107.1 138 43.5
BcaC01g04256 Brassica carinata HOM05D006043 ORTHO05D007309 3.6e-21 105.5 147 46.3
C03p43400 Brassica napus HOM05D006043 ORTHO05D007309 6.2e-21 104.8 147 46.3
TAR334G0001 Trochodendron aralioides HOM05D006043 ORTHO05D007309 1.1e-20 104.0 84 61.9
TAR369G1076 Trochodendron aralioides HOM05D006043 ORTHO05D007309 1.1e-20 104.0 84 61.9
HPP92_021571 Vanilla planifolia HOM05D006043 ORTHO05D007309 1.4e-20 103.6 133 43.6
Lj4P368T6 Lonicera japonica HOM05D006043 ORTHO05D007309 1.8e-20 103.2 86 58.1
Os12g0147200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 2.4e-20 102.8 139 44.6
BolC3t16611H Brassica oleracea HOM05D006043 ORTHO05D007309 5.3e-20 101.7 147 42.9
Zm00001eb406490 Zea mays HOM05D006043 ORTHO05D007309 1.5e-19 100.1 143 43.4
Solyc09g008970.1 Solanum lycopersicum HOM05D006043 ORTHO05D007309 1.1e-17 94.0 133 42.1
Sopen09g003730 Solanum pennellii HOM05D006043 ORTHO05D007309 4.2e-17 92.0 154 39.6
BolC8t51238H Brassica oleracea HOM05D006043 ORTHO05D007309 1.7e-15 86.7 137 43.8
Os11g0149200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 1.7e-15 86.7 146 40.4
Nn1g08859 Nelumbo nucifera HOM05D006043 ORTHO05D007309 7.3e-14 81.3 63 61.9
AUR62033593 Chenopodium quinoa HOM05D006043 ORTHO05D007309 5.8e-11 71.6 143 38.5
SEGI_20897 Sequoiadendron giganteum HOM05D006043 ORTHO05D007309 8.4e-10 67.8 133 39.1
C08p36560 Brassica napus HOM05D006043 ORTHO05D007309 5.5e-09 65.1 104 44.2
BcaC03g16179 Brassica carinata HOM05D006043 ORTHO05D007309 9.3e-09 64.3 104 44.2
THA.LOC104823222 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 1.2e-08 63.9 70 41.4
SMO347G0034 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 1.6e-08 63.5 145 31.7
C02p39530 Brassica napus HOM05D006043 ORTHO05D007309 2.7e-08 62.8 104 43.3
BolC2t09966H Brassica oleracea HOM05D006043 ORTHO05D007309 2.7e-08 62.8 104 43.3
Mapoly0058s0037 Marchantia polymorpha HOM05D006043 ORTHO05D007309 3.5e-08 62.4 88 44.3
SMO358G0245 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 3.0e-07 59.3 80 43.8
Oeu023852.1 Olea europaea HOM05D006043 ORTHO05D007309 1.9e-06 56.6 116 35.3
AUR62037886 Chenopodium quinoa HOM05D006043 ORTHO05D007309 5.6e-06 55.1 67 43.3
Pp3c23_8320 Physcomitrium patens HOM05D053615 ORTHO05D007309 7.4e-06 54.7 69 47.8


User provided reference genes

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