Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010123g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 2.3e-74 283.9 140 100.0
Nitab4.5_0004239g0030 Nicotiana tabacum HOM05D007545 ORTHO05D009579 2.0e-70 270.8 140 95.0
Nitab4.5_0001650g0170 Nicotiana tabacum HOM05D007545 ORTHO05D009579 2.0e-65 254.2 129 96.9
Nitab4.5_0001650g0140 Nicotiana tabacum HOM05D007545 ORTHO05D009579 4.4e-65 253.1 140 92.1
PGSC0003DMG400013237 Solanum tuberosum HOM05D007545 ORTHO05D009579 1.7e-64 251.1 140 87.1
Solyc11g011410.3 Solanum lycopersicum HOM05D007545 ORTHO05D009579 3.7e-64 250.0 139 87.8
CAN.G222.58 Capsicum annuum HOM05D007545 ORTHO05D009579 3.8e-61 240.0 140 82.9
Peaxi162Scf00562g00002 Petunia axillaris HOM05D007545 ORTHO05D009579 5.0e-61 239.6 142 83.1
Nitab4.5_0001088g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 1.5e-60 238.0 134 91.0
Sopen11g006210 Solanum pennellii HOM05D007545 ORTHO05D009579 9.5e-60 235.3 134 86.6
Actinidia06485 Actinidia chinensis HOM05D007545 ORTHO05D009579 4.3e-36 156.8 133 57.1
Gohir.D08G049200 Gossypium hirsutum HOM05D007545 ORTHO05D009579 1.6e-35 154.8 139 52.5
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 5.2e-34 149.8 133 53.4
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 5.2e-34 149.8 133 53.4
Oeu030299.1 Olea europaea HOM05D007545 ORTHO05D009579 8.9e-34 149.1 133 59.4
Prupe.3G166000 Prunus persica HOM05D007545 ORTHO05D009579 1.5e-33 148.3 139 52.5
Migut.K00924 Erythranthe guttata HOM05D007545 ORTHO05D009579 2.6e-33 147.5 135 59.3
Gorai.004G048700 Gossypium raimondii HOM05D007545 ORTHO05D009579 2.6e-33 147.5 135 51.1
Ciclev10011347m.g Citrus clementina HOM05D007545 ORTHO05D009579 3.7e-32 143.7 139 50.4
Thhalv10007116m.g Eutrema salsugineum HOM05D007545 ORTHO05D009579 2.1e-30 137.9 140 48.6
BraA06t23847Z Brassica rapa HOM05D007545 ORTHO05D009579 7.8e-30 136.0 140 47.1
MBI19_g08382_MAGBIO Magnolia biondii HOM05D007545 ORTHO05D009579 1.3e-29 135.2 132 49.2
SalBow5G0095 Salvia bowleyana HOM05D007545 ORTHO05D009579 1.7e-29 134.8 126 54.8
Gohir.D11G205366 Gossypium hirsutum HOM05D007545 ORTHO05D009579 2.3e-29 134.4 140 47.9
ClCG05G010640 Citrullus lanatus HOM05D007545 ORTHO05D009579 3.0e-29 134.0 135 47.4
A06p06360 Brassica napus HOM05D007545 ORTHO05D009579 3.9e-29 133.7 140 47.1
SGA_v2.0_scaffold45G17151 Striga asiatica HOM05D007545 ORTHO05D009579 3.9e-29 133.7 123 52.0
Lj4C259T9 Lonicera japonica HOM05D007545 ORTHO05D009579 6.6e-29 132.9 133 49.6
RcHm_v2.0_Chr3g0491601 Rosa chinensis HOM05D007545 ORTHO05D009579 6.6e-29 132.9 136 47.8
Sp1g08270 Schrenkiella parvula HOM05D001024 ORTHO05D009579 6.6e-29 132.9 139 47.5
Sc14g0006910 Simmondsia chinensis HOM05D007545 ORTHO05D009579 6.6e-29 132.9 136 50.0
Nn3g18372 Nelumbo nucifera HOM05D007545 ORTHO05D009579 1.5e-28 131.7 139 46.0
C05p07760 Brassica napus HOM05D007545 ORTHO05D009579 1.9e-28 131.3 139 46.0
BolC5t29527H Brassica oleracea HOM05D007545 ORTHO05D009579 1.9e-28 131.3 139 46.0
Aa31LG1G5330 Aethionema arabicum HOM05D007545 ORTHO05D009579 2.5e-28 131.0 140 45.7
CARHR009650 Cardamine hirsuta HOM05D007545 ORTHO05D009579 2.5e-28 131.0 137 46.0
TWI77G0027 Tripterygium wilfordii HOM05D007545 ORTHO05D009579 5.6e-28 129.8 136 46.3
Atru.chr1.1983 Acer truncatum HOM05D007545 ORTHO05D009579 9.5e-28 129.0 140 43.6
Haze_14281 Corylus avellana HOM05D007545 ORTHO05D009579 9.5e-28 129.0 120 53.3
AL1G20230 Arabidopsis lyrata HOM05D007545 ORTHO05D009579 1.2e-27 128.6 137 44.5
MELO3C032020.2 Cucumis melo HOM05D007545 ORTHO05D009579 1.2e-27 128.6 132 47.7
THA.LOC104805633 Tarenaya hassleriana HOM05D007545 ORTHO05D009579 2.1e-27 127.9 139 45.3
AT1G09680 Arabidopsis thaliana HOM05D007545 ORTHO05D009579 3.6e-27 127.1 140 44.3
Gohir.A08G039000 Gossypium hirsutum HOM05D007545 ORTHO05D009579 4.7e-27 126.7 139 46.0
FAN26G0753 Fragaria x ananassa HOM05D007545 ORTHO05D009579 6.2e-27 126.3 141 46.1
CiPaw.03G073600 Carya illinoinensis HOM05D007545 ORTHO05D009579 8.1e-27 125.9 117 55.6
FAN19G0914 Fragaria x ananassa HOM05D007545 ORTHO05D009579 1.1e-26 125.6 141 45.4
TAR371G0190 Trochodendron aralioides HOM05D007545 ORTHO05D009579 1.1e-26 125.6 117 53.8
MD17G1268500 Malus domestica HOM05D007545 ORTHO05D009579 4.0e-26 123.6 117 52.1
Cfa007791 Carpinus fangiana HOM05D007545 ORTHO05D009579 5.2e-26 123.2 117 51.3
Sed0004069 Sechium edule HOM05D007545 ORTHO05D009579 6.8e-26 122.9 132 44.7
ATR0661G317 Amborella trichopoda HOM05D007545 ORTHO05D009579 1.2e-25 122.1 139 43.2
Eucgr.F02875 Eucalyptus grandis HOM05D007545 ORTHO05D009579 3.4e-25 120.6 139 45.3
COL.COLO4_13423 Corchorus olitorius HOM05D007545 ORTHO05D009579 9.9e-25 119.0 93 54.8
PSO017G5257 Papaver somniferum HOM05D007545 ORTHO05D009579 1.3e-24 118.6 130 45.4
Carub.0001s0902 Capsella rubella HOM05D007545 ORTHO05D009579 1.7e-24 118.2 136 43.4
PSO478G2209 Papaver somniferum HOM05D007545 ORTHO05D009579 2.2e-24 117.9 131 45.8
Potri.017G131400 Populus trichocarpa HOM05D007545 ORTHO05D009579 2.2e-24 117.9 90 55.6
LjContig00141g0003453 Lotus japonicus HOM05D007545 ORTHO05D009579 2.9e-24 117.5 139 43.9
Hund13089 Selenicereus undatus HOM05D007545 ORTHO05D009579 2.9e-24 117.5 137 42.3
Sabra17G0109500 Salix brachista HOM05D007545 ORTHO05D009579 3.8e-24 117.1 133 42.9
Lalb_Chr10g0104281 Lupinus albus HOM05D007545 ORTHO05D009579 2.4e-23 114.4 141 42.6
Phvul.008G237700 Phaseolus vulgaris HOM05D007545 ORTHO05D009579 2.4e-23 114.4 141 43.3
Cpa.g.sc340.2 Carica papaya HOM05D007545 ORTHO05D009579 4.1e-23 113.6 98 55.1
HanXRQChr14g0457331 Helianthus annuus HOM05D007545 ORTHO05D009579 4.1e-23 113.6 139 46.0
PGR004G2599 Punica granatum HOM05D007545 ORTHO05D009579 7.1e-23 112.8 139 41.7
Glyma.02G243500 Glycine max HOM05D007545 ORTHO05D009579 1.2e-22 112.1 144 41.7
Manes.01G119900 Manihot esculenta HOM05D007545 ORTHO05D009579 1.6e-22 111.7 95 51.6
Psat2g047200 Pisum sativum HOM05D007545 ORTHO05D009579 2.7e-22 110.9 141 40.4
TPR.G23654 Trifolium pratense HOM05D007545 ORTHO05D009579 2.7e-22 110.9 143 41.3
Hma1.2p1_0158F.1_g070060 Hydrangea macrophylla HOM05D007545 ORTHO05D009579 7.8e-22 109.4 82 61.0
VMungo0647G0528 Vigna mungo HOM05D007545 ORTHO05D009579 7.8e-22 109.4 141 39.7
Nitab4.5_0005124g0010 Nicotiana tabacum HOM05D007545 ORTHO05D009579 1.3e-21 108.6 55 92.7
Rhsim10G0178600 Rhododendron simsii HOM05D007545 ORTHO05D009579 2.3e-21 107.8 138 39.1
Lsat_1_v5_gn_2_68461 Lactuca sativa HOM05D007545 ORTHO05D009579 3.9e-21 107.1 140 42.9
ATR0753G016 Amborella trichopoda HOM05D007545 ORTHO05D009579 8.6e-21 105.9 142 38.0
Ca_05835_v3 Cicer arietinum L. HOM05D007545 ORTHO05D009579 8.6e-21 105.9 126 42.1
Medtr5g077930 Medicago truncatula HOM05D007545 ORTHO05D009579 8.6e-21 105.9 140 40.0
QL08p020033 Quercus lobata HOM05D007545 ORTHO05D009579 1.9e-20 104.8 87 56.3
QL05p016537 Quercus lobata HOM05D007545 ORTHO05D009579 3.6e-19 100.5 87 54.0
CANSAT64G1149 Cannabis sativa HOM05D007545 ORTHO05D009579 3.1e-18 97.4 126 42.1
ECA238G0700 Erigeron canadensis HOM05D007545 ORTHO05D009579 4.0e-18 97.1 136 41.2
Sed0020460 Sechium edule HOM05D007545 ORTHO05D009579 2.6e-17 94.4 133 39.1
GSVIVG01030674001 Vitis vinifera HOM05D007545 ORTHO05D009579 9.9e-17 92.4 122 41.8
Aqoxy3G04069 Aquilegia oxysepala HOM05D007545 ORTHO05D009579 7.1e-15 86.3 111 40.5
SEGI_34198 Sequoiadendron giganteum HOM05D007545 ORTHO05D009579 5.6e-12 76.6 115 35.7
Gorai.007G220500 Gossypium raimondii HOM05D007545 ORTHO05D009579 1.8e-10 71.6 139 32.4
Nitab4.5_0009075g0010 Nicotiana tabacum HOM05D007545 ORTHO05D009579 3.1e-10 70.9 39 87.2
HPP92_026949 Vanilla planifolia HOM05D007545 ORTHO05D009579 1.2e-09 68.9 91 37.4
Dinv28181 Davidia involucrata HOM05D007545 ORTHO05D009579 6.4e-08 63.2 51 54.9
Nn1g03517 Nelumbo nucifera HOM05D002890 ORTHO05D009847 1.1e-07 62.4 145 27.6
Aqoxy1G00452 Aquilegia oxysepala HOM05D007455 ORTHO05D009431 4.2e-07 60.5 134 29.1
CSS0001323 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D009847 5.4e-07 60.1 147 31.3
Zm00001eb080520 Zea mays HOM05D007545 ORTHO05D009579 7.1e-07 59.7 132 28.8
Zm00001eb080530 Zea mays HOM05D007545 ORTHO05D009579 7.1e-07 59.7 132 28.8
Ca_20820_v3 Cicer arietinum L. HOM05D007083 ORTHO05D008801 3.5e-06 57.4 113 27.4
HanXRQChr12g0374971 Helianthus annuus HOM05D007083 ORTHO05D008801 3.5e-06 57.4 129 24.8
Sp3g28900 Schrenkiella parvula HOM05D007083 ORTHO05D008801 3.5e-06 57.4 130 26.9
Solyc01g109060.4 Solanum lycopersicum HOM05D007083 ORTHO05D008801 3.5e-06 57.4 133 27.1
Gohir.A03G067600 Gossypium hirsutum HOM05D007763 ORTHO05D009537 4.6e-06 57.0 110 30.9
Sopen01g051260 Solanum pennellii HOM05D007083 ORTHO05D008801 4.6e-06 57.0 133 27.1
Rhsim13G0211000 Rhododendron simsii HOM05D007455 ORTHO05D009431 6.0e-06 56.6 134 26.1
SEGI_33147 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 7.9e-06 56.2 102 32.4
PGSC0003DMG401009622 Solanum tuberosum HOM05D007455 ORTHO05D009431 7.9e-06 56.2 97 27.8


User provided reference genes

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