Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010123g0010 Nicotiana tabacum HOM05D007225 ORTHO05D009062 4.8e-74 281.2 154 100.0
Nitab4.5_0008206g0020 Nicotiana tabacum HOM05D007225 ORTHO05D009062 8.3e-66 253.8 154 90.9
Nitab4.5_0000386g0080 Nicotiana tabacum HOM05D007225 ORTHO05D009062 8.0e-61 237.3 154 86.4
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 6.6e-55 217.6 161 78.9
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 1.2e-51 206.8 161 75.2
Sopen01g048040 Solanum pennellii HOM05D007225 ORTHO05D009062 7.5e-51 204.1 161 74.5
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 2.4e-33 146.0 162 55.6
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 4.1e-33 145.2 158 53.8
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 1.7e-31 139.8 165 55.2
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 1.2e-29 133.7 157 50.3
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 1.4e-28 130.2 162 50.0
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 1.7e-26 123.2 157 50.3
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 1.1e-25 120.6 159 50.3
Sc07g0001760 Simmondsia chinensis HOM05D007225 ORTHO05D009062 3.2e-25 119.0 156 48.1
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 4.2e-25 118.6 156 48.1
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 7.1e-25 117.9 160 48.1
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 7.1e-25 117.9 151 44.4
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 9.3e-25 117.5 157 45.9
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 2.1e-24 116.3 149 45.6
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 3.5e-24 115.5 149 47.7
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 1.3e-23 113.6 151 51.0
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 1.3e-23 113.6 163 43.6
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 3.9e-23 112.1 157 46.5
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 1.1e-22 110.5 148 48.6
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 1.5e-22 110.2 156 42.9
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 1.9e-22 109.8 157 45.9
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 3.3e-22 109.0 156 43.6
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 5.6e-22 108.2 149 45.6
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 7.3e-22 107.8 152 44.1
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 9.6e-22 107.5 151 46.4
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 1.3e-21 107.1 151 46.4
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 2.8e-21 105.9 142 45.8
Peaxi162Scf00172g00611 Petunia axillaris HOM05D007225 ORTHO05D009062 2.8e-21 105.9 62 88.7
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 2.8e-21 105.9 166 41.6
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 3.6e-21 105.5 156 44.9
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 4.8e-21 105.1 155 49.0
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 4.8e-21 105.1 151 45.7
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 4.8e-21 105.1 152 43.4
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 8.1e-21 104.4 231 36.4
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 1.4e-20 103.6 139 47.5
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 1.8e-20 103.2 152 42.1
Sed0013127 Sechium edule HOM05D007225 ORTHO05D009062 2.4e-20 102.8 157 43.9
MELO3C023228.2 Cucumis melo HOM05D007225 ORTHO05D009062 3.1e-20 102.4 158 45.6
SGA_v2.0_scaffold20G09018 Striga asiatica HOM05D007225 ORTHO05D009062 3.1e-20 102.4 142 46.5
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 3.1e-20 102.4 167 43.1
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 4.0e-20 102.1 149 45.0
CsaV3_2G019450 Cucumis sativus L. HOM05D007225 ORTHO05D009062 5.3e-20 101.7 158 45.6
HanXRQChr12g0380581 Helianthus annuus HOM05D007225 ORTHO05D009062 9.0e-20 100.9 157 42.0
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 2.0e-19 99.8 150 46.7
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 2.6e-19 99.4 147 42.2
AUR62017902 Chenopodium quinoa HOM05D007225 ORTHO05D009062 3.4e-19 99.0 173 40.5
AUR62043562 Chenopodium quinoa HOM05D007225 ORTHO05D009062 3.4e-19 99.0 173 40.5
AUR62003589 Chenopodium quinoa HOM05D007225 ORTHO05D009062 1.7e-18 96.7 173 39.9
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 2.2e-18 96.3 146 46.6
ClCG02G000390 Citrullus lanatus HOM05D007225 ORTHO05D009062 3.8e-18 95.5 169 42.6
Peaxi162Scf00172g00068 Petunia axillaris HOM05D007225 ORTHO05D009062 4.9e-18 95.1 96 59.4
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 1.1e-17 94.0 166 38.0
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 5.4e-17 91.7 152 40.8
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 6.0e-16 88.2 151 40.4
PGR119G1418 Punica granatum HOM05D007225 ORTHO05D009062 1.0e-15 87.4 144 40.3
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 2.3e-15 86.3 167 40.1
Aqoxy5G02304 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 3.0e-15 85.9 162 39.5
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 5.1e-15 85.1 142 45.1
Thhalv10004850m.g Eutrema salsugineum HOM05D007225 ORTHO05D009062 6.6e-15 84.7 147 39.5
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 2.5e-14 82.8 163 38.7
CARHR277930 Cardamine hirsuta HOM05D007225 ORTHO05D002208 5.6e-14 81.6 144 41.0
unitig_699.g19729 Utricularia gibba HOM05D007225 ORTHO05D009062 7.3e-14 81.3 150 39.3
AL8G41270 Arabidopsis lyrata HOM05D007225 ORTHO05D009062 1.3e-13 80.5 147 38.8
AT5G64010 Arabidopsis thaliana HOM05D007225 ORTHO05D009062 1.3e-13 80.5 142 39.4
DCAR_010250 Daucus carota HOM05D007225 ORTHO05D009062 2.1e-13 79.7 164 34.1
EL10Ac1g01390 Beta vulgaris HOM05D007225 ORTHO05D009062 3.6e-13 79.0 159 38.4
Lsat_1_v5_gn_5_68521 Lactuca sativa HOM05D007225 ORTHO05D009062 6.2e-13 78.2 143 40.6
A06p30630 Brassica napus HOM05D007225 ORTHO05D009062 2.4e-12 76.3 151 35.8
C03p62330 Brassica napus HOM05D007225 ORTHO05D009062 2.4e-12 76.3 147 36.1
BcaC01g02654 Brassica carinata HOM05D007225 ORTHO05D009062 5.3e-12 75.1 147 35.4
BolC3t18495H Brassica oleracea HOM05D007225 ORTHO05D009062 5.3e-12 75.1 147 35.4
Carub.0008s2479 Capsella rubella HOM05D007225 ORTHO05D009062 6.9e-12 74.7 148 38.5
BraA06t26013Z Brassica rapa HOM05D007225 ORTHO05D009062 9.0e-12 74.3 151 35.1
Sp2g27080 Schrenkiella parvula HOM05D007225 ORTHO05D009062 9.0e-12 74.3 147 36.1
Os04g0693250 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 1.3e-10 70.5 164 34.8
HPP92_025180 Vanilla planifolia HOM05D007225 ORTHO05D009062 1.7e-10 70.1 171 33.3
Manes.12G157300 Manihot esculenta HOM05D007225 ORTHO05D009062 6.4e-10 68.2 92 46.7
RcHm_v2.0_Chr4g0412711 Rosa chinensis HOM05D007225 ORTHO05D009062 1.1e-09 67.4 84 46.4
Nn5g28498 Nelumbo nucifera HOM05D007225 ORTHO05D009062 1.9e-09 66.6 73 46.6
Medtr8g093850 Medicago truncatula HOM05D007225 ORTHO05D009062 2.4e-09 66.2 78 46.2
GSVIVG01022343001 Vitis vinifera HOM05D007225 ORTHO05D009062 2.4e-09 66.2 59 55.9
Gohir.A10G156900 Gossypium hirsutum HOM05D007225 ORTHO05D009062 3.2e-09 65.9 66 51.5
THA.LOC104818429 Tarenaya hassleriana HOM05D007225 ORTHO05D009062 3.2e-09 65.9 145 39.3
Aa31LG1G17910 Aethionema arabicum HOM05D007225 ORTHO05D009062 5.5e-09 65.1 150 33.3
Ah.02g121670 Amaranthus hybridus HOM05D007225 ORTHO05D009062 5.5e-09 65.1 102 37.3
ATR0709G077 Amborella trichopoda HOM05D007225 ORTHO05D009062 9.3e-09 64.3 74 47.3
Carub.0003s2889 Capsella rubella HOM05D007225 ORTHO05D009062 7.9e-08 61.2 63 52.4
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 1.0e-07 60.8 146 35.6
Aqoxy6G00280 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 5.1e-07 58.5 158 33.5
VMungo0251G1761 Vigna mungo HOM05D007225 ORTHO05D009062 5.1e-07 58.5 123 41.5


User provided reference genes

Program Settings