Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010092g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 1.1e-203 713.4 433 100.0
Nitab4.5_0001159g0190 Nicotiana tabacum HOM05D009522 ORTHO05D009846 7.3e-168 594.3 439 87.9
PGSC0003DMG400029280 Solanum tuberosum HOM05D009522 ORTHO05D009846 1.3e-140 503.8 440 73.0
Solyc12g096400.2 Solanum lycopersicum HOM05D009522 ORTHO05D009846 7.3e-136 488.0 440 73.4
CAN.G566.64 Capsicum annuum HOM05D009522 ORTHO05D009846 1.9e-128 463.4 442 70.4
Sopen12g032250 Solanum pennellii HOM05D009522 ORTHO05D009846 6.5e-116 421.8 440 68.2
Peaxi162Scf00459g00082 Petunia axillaris HOM05D009522 ORTHO05D009846 2.0e-96 357.1 490 57.3
Peaxi162Scf00288g00084 Petunia axillaris HOM05D009522 ORTHO05D009846 3.4e-56 223.4 463 45.6
CAN.G908.7 Capsicum annuum HOM05D009522 ORTHO05D009846 5.8e-48 196.1 494 42.1
Nitab4.5_0002023g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 9.5e-43 178.7 484 40.1
Nitab4.5_0000502g0110 Nicotiana tabacum HOM05D009522 ORTHO05D009846 6.6e-36 156.0 467 42.4
PGSC0003DMG400029579 Solanum tuberosum HOM05D009522 ORTHO05D009846 1.2e-32 145.2 493 38.5
Sopen08g022670 Solanum pennellii HOM05D009522 ORTHO05D009846 1.3e-31 141.7 493 36.7
Solyc08g069020.1 Solanum lycopersicum HOM05D009522 ORTHO05D009846 2.6e-24 117.5 492 34.3
Oeu018569.1 Olea europaea HOM05D009522 ORTHO05D009846 9.3e-22 109.0 458 34.1
Rhsim07G0169800 Rhododendron simsii HOM05D033576 ORTHO05D009846 6.0e-21 106.3 466 32.0
Nitab4.5_0000555g0230 Nicotiana tabacum HOM05D017514 ORTHO05D009846 6.6e-20 102.8 413 32.9
Nitab4.5_0004131g0040 Nicotiana tabacum HOM05D017514 ORTHO05D009846 1.9e-19 101.3 410 34.4
Peaxi162Scf00045g01739 Petunia axillaris HOM05D017514 ORTHO05D009846 8.1e-18 95.9 491 34.0
Cc00_g05330 Coffea canephora HOM05D009522 ORTHO05D009846 4.0e-17 93.6 480 32.1
SGA_v2.0_scaffold27G11671 Striga asiatica HOM05D009522 ORTHO05D009846 2.2e-15 87.8 444 30.9
MSTRG.11810 Avicennia marina HOM05D009522 ORTHO05D009846 4.6e-13 80.1 52 80.8
Duzib168G1354 Durio zibethinus HOM05D019025 ORTHO05D009846 5.1e-12 76.6 449 29.2
PGR031G3799 Punica granatum HOM05D009522 ORTHO05D009846 6.6e-12 76.3 471 29.7
Oeu040384.1 Olea europaea HOM05D009522 ORTHO05D009846 1.1e-11 75.5 138 44.2
MSTRG.25778 Avicennia marina HOM05D009522 ORTHO05D009846 5.6e-11 73.2 492 30.1
SGA_v2.0_scaffold121G33031 Striga asiatica HOM05D009522 ORTHO05D009846 1.6e-10 71.6 47 78.7
PGSC0003DMG400026295 Solanum tuberosum HOM05D017514 ORTHO05D009846 6.2e-10 69.7 60 66.7
Migut.A00437 Erythranthe guttata HOM05D009522 ORTHO05D009846 1.1e-09 68.9 602 27.7
Migut.E01423 Erythranthe guttata HOM05D009522 ORTHO05D009846 1.8e-09 68.2 58 67.2
CAN.G673.17 Capsicum annuum HOM05D017514 ORTHO05D009846 4.0e-09 67.0 172 39.5
Sabra18G0011200 Salix brachista HOM05D014278 ORTHO05D009846 9.0e-09 65.9 470 30.0
Sabra18G0013600 Salix brachista HOM05D014278 ORTHO05D009846 9.0e-09 65.9 470 30.0
MBI14_g19445_MAGBIO Magnolia biondii HOM05D021794 ORTHO05D009846 2.6e-08 64.3 447 30.0
ECA240G3142 Erigeron canadensis HOM05D009522 ORTHO05D009846 3.4e-08 63.9 74 55.4
unitig_32.g10944 Utricularia gibba HOM05D009522 ORTHO05D009846 9.9e-08 62.4 450 28.9
Ca_15666_v3 Cicer arietinum L. HOM05D013197 ORTHO05D009846 1.7e-07 61.6 145 37.9
Potri.006G274600 Populus trichocarpa HOM05D014278 ORTHO05D009846 1.7e-07 61.6 469 28.8
Atru.chr8.382 Acer truncatum HOM05D003021 ORTHO05D002235 2.2e-07 61.2 51 66.7
Rhsim08G0073600 Rhododendron simsii HOM05D003021 ORTHO05D002235 2.9e-07 60.8 87 47.1
COL.COLO4_21376 Corchorus olitorius HOM05D003021 ORTHO05D002235 4.9e-07 60.1 51 66.7
CSS0009627 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 6.4e-07 59.7 51 66.7
CSS0042635 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 6.4e-07 59.7 51 66.7
Ciclev10011360m.g Citrus clementina HOM05D003021 ORTHO05D002235 6.4e-07 59.7 86 52.3
Aa31LG9G16610 Aethionema arabicum HOM05D003021 ORTHO05D002235 1.1e-06 58.9 62 56.5
CANSAT64G0795 Cannabis sativa HOM05D003021 ORTHO05D002235 1.1e-06 58.9 51 64.7
AUR62018150 Chenopodium quinoa HOM05D003021 ORTHO05D002235 1.1e-06 58.9 63 57.1
Duzib187G0754 Durio zibethinus HOM05D003021 ORTHO05D002235 1.4e-06 58.5 51 66.7
Dinv11486 Davidia involucrata HOM05D003021 ORTHO05D002235 1.9e-06 58.2 51 64.7
Nitab4.5_0003145g0060 Nicotiana tabacum HOM05D003021 ORTHO05D002235 1.9e-06 58.2 51 64.7
Oeu000855.1 Olea europaea HOM05D003021 ORTHO05D002235 1.9e-06 58.2 49 67.3
RcHm_v2.0_Chr6g0304991 Rosa chinensis HOM05D013263 ORTHO05D009846 2.4e-06 57.8 477 26.0
TAR629G0828 Trochodendron aralioides HOM05D003021 ORTHO05D002235 2.4e-06 57.8 51 64.7
Duzib147G0806 Durio zibethinus HOM05D003021 ORTHO05D002235 3.2e-06 57.4 51 64.7
Migut.H00652 Erythranthe guttata HOM05D003021 ORTHO05D002235 3.2e-06 57.4 51 66.7
Sopen03g034540 Solanum pennellii HOM05D003021 ORTHO05D022173 3.2e-06 57.4 50 60.0
Aqoxy3G03562 Aquilegia oxysepala HOM05D003021 ORTHO05D002235 4.2e-06 57.0 51 62.7
Gohir.A05G370400 Gossypium hirsutum HOM05D003021 ORTHO05D002235 4.2e-06 57.0 51 64.7
Gohir.D04G045100 Gossypium hirsutum HOM05D003021 ORTHO05D002235 4.2e-06 57.0 51 64.7
Gorai.012G050300 Gossypium raimondii HOM05D003021 ORTHO05D002235 4.2e-06 57.0 51 64.7
BcaB06g27294 Brassica carinata HOM05D003021 ORTHO05D002235 5.5e-06 56.6 50 64.0
C04p45710 Brassica napus HOM05D003021 ORTHO05D002235 5.5e-06 56.6 50 64.0
BolC4t26155H Brassica oleracea HOM05D003021 ORTHO05D002235 5.5e-06 56.6 50 64.0
ClCG11G004640 Citrullus lanatus HOM05D003021 ORTHO05D002235 5.5e-06 56.6 67 56.7
MELO3C022022.2 Cucumis melo HOM05D003021 ORTHO05D002235 5.5e-06 56.6 63 55.6
SalBow1G6367 Salvia bowleyana HOM05D003021 ORTHO05D002235 5.5e-06 56.6 69 55.1
Sopen08g002390 Solanum pennellii HOM05D017514 ORTHO05D009846 5.5e-06 56.6 199 34.2
Thecc.04G090900 Theobroma cacao HOM05D003021 ORTHO05D002235 5.5e-06 56.6 51 62.7
TWI60G1604 Tripterygium wilfordii HOM05D003021 ORTHO05D002235 5.5e-06 56.6 51 62.7
EL10Ac2g03069 Beta vulgaris HOM05D003021 ORTHO05D002235 7.1e-06 56.2 69 49.3
Potri.018G005500 Populus trichocarpa HOM05D014278 ORTHO05D009846 7.1e-06 56.2 481 28.7
Solyc08g006440.4 Solanum lycopersicum HOM05D017514 ORTHO05D009846 7.1e-06 56.2 212 32.1
BcaC06g33168 Brassica carinata HOM05D009040 ORTHO05D002235 9.3e-06 55.8 50 60.0
ClCG08G012670 Citrullus lanatus HOM05D019337 ORTHO05D009846 9.3e-06 55.8 410 28.0
HanXRQChr15g0488721 Helianthus annuus HOM05D003021 ORTHO05D002235 9.3e-06 55.8 51 62.7
Lj8P444T9 Lonicera japonica HOM05D009522 ORTHO05D009846 9.3e-06 55.8 138 38.4
Lj1g0014126 Lotus japonicus HOM05D003021 ORTHO05D002235 9.3e-06 55.8 51 62.7
Medtr7g012290 Medicago truncatula HOM05D003021 ORTHO05D002235 9.3e-06 55.8 51 62.7
Oeu000639.1 Olea europaea HOM05D003021 ORTHO05D002235 9.3e-06 55.8 46 65.2
Potri.017G090200 Populus trichocarpa HOM05D003021 ORTHO05D002235 9.3e-06 55.8 51 62.7
VMungo0464G0637 Vigna mungo HOM05D003021 ORTHO05D002235 9.3e-06 55.8 36 77.8


User provided reference genes

Program Settings