Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 2.7e-93 345.5 202 100.0
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 5.0e-87 324.7 202 93.6
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 1.6e-77 293.1 202 74.8
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 2.0e-75 286.2 202 83.2
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 1.9e-70 269.6 202 71.3
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 7.8e-64 247.7 123 95.9
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 8.6e-63 244.2 203 67.0
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 3.7e-58 228.8 121 88.4
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 6.4e-58 228.0 123 88.6
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 1.9e-57 226.5 121 86.8
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 9.2e-57 224.2 122 84.4
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 2.1e-56 223.0 119 86.6
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 3.5e-56 222.2 123 85.4
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 3.5e-56 222.2 123 82.1
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 4.6e-56 221.9 118 87.3
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 6.0e-56 221.5 118 86.4
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 6.0e-56 221.5 123 83.7
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 7.8e-56 221.1 121 86.0
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 7.8e-56 221.1 119 86.6
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 7.8e-56 221.1 118 87.3
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 7.8e-56 221.1 123 83.7
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 1.3e-55 220.3 121 84.3
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 1.3e-55 220.3 118 86.4
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 2.3e-55 219.5 118 86.4
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 2.3e-55 219.5 118 86.4
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 3.0e-55 219.2 118 86.4
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 3.0e-55 219.2 118 87.3
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 3.9e-55 218.8 118 87.3
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 6.6e-55 218.0 118 83.1
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 8.6e-55 217.6 126 81.7
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 8.6e-55 217.6 123 82.1
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 8.6e-55 217.6 123 81.3
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 1.1e-54 217.2 118 85.6
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 1.1e-54 217.2 118 86.4
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 1.5e-54 216.9 119 82.4
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 1.5e-54 216.9 121 81.8
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 1.9e-54 216.5 119 84.0
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 1.9e-54 216.5 119 84.9
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 2.5e-54 216.1 123 81.3
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 2.5e-54 216.1 118 85.6
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 3.3e-54 215.7 118 85.6
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 3.3e-54 215.7 116 85.3
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 4.3e-54 215.3 118 83.9
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 4.3e-54 215.3 126 80.2
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 5.6e-54 214.9 117 83.8
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 5.6e-54 214.9 119 82.4
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 7.3e-54 214.5 126 80.2
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 7.3e-54 214.5 119 81.5
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 9.5e-54 214.2 119 81.5
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 9.5e-54 214.2 119 84.0
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 9.5e-54 214.2 119 84.0
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 9.5e-54 214.2 118 84.7
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 1.2e-53 213.8 118 83.1
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 1.2e-53 213.8 118 85.6
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 1.2e-53 213.8 125 80.0
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 1.6e-53 213.4 119 81.5
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 1.6e-53 213.4 126 80.2
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 1.6e-53 213.4 125 81.6
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 2.1e-53 213.0 121 82.6
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 2.1e-53 213.0 115 85.2
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 2.1e-53 213.0 119 83.2
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 2.8e-53 212.6 126 79.4
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 2.8e-53 212.6 115 87.8
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 2.8e-53 212.6 118 84.7
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 4.7e-53 211.8 126 78.6
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 4.7e-53 211.8 119 79.8
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 6.2e-53 211.5 121 80.2
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 6.2e-53 211.5 121 80.2
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 6.2e-53 211.5 119 81.5
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 1.4e-52 210.3 119 81.5
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 1.4e-52 210.3 118 82.2
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 1.4e-52 210.3 118 81.4
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 1.8e-52 209.9 121 79.3
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 3.1e-52 209.1 119 80.7
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 3.1e-52 209.1 126 77.0
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 3.1e-52 209.1 126 77.0
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 4.0e-52 208.8 119 81.5
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 4.0e-52 208.8 119 80.7
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 4.0e-52 208.8 118 81.4
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 5.2e-52 208.4 123 77.2
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 5.2e-52 208.4 123 78.9
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 5.2e-52 208.4 117 79.5
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 8.9e-52 207.6 119 80.7
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 1.5e-51 206.8 116 81.0
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 3.4e-51 205.7 118 80.5
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 7.6e-51 204.5 116 82.8
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 2.2e-50 203.0 118 78.8
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 3.7e-50 202.2 131 76.3
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 1.4e-49 200.3 119 80.7
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 3.2e-49 199.1 119 79.8
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 3.2e-49 199.1 121 71.9
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 5.4e-49 198.4 119 79.8
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 1.2e-48 197.2 121 75.2
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 7.8e-48 194.5 120 73.3
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 7.8e-48 194.5 118 76.3
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 1.3e-47 193.7 118 75.4
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 1.9e-46 189.9 108 80.6
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 7.3e-46 188.0 148 64.9
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 1.5e-43 180.3 125 67.2
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 5.4e-41 171.8 99 77.8
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 5.4e-41 171.8 138 64.5
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 7.1e-41 171.4 120 65.0
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 1.3e-39 167.2 132 62.9
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 1.1e-38 164.1 137 61.3
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 1.1e-36 157.5 125 59.2
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 5.8e-35 151.8 124 55.6
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 2.9e-34 149.4 120 57.5
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 2.5e-22 109.8 81 66.7
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.6e-21 107.1 57 82.5
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 4.8e-21 105.5 57 80.7
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 4.8e-21 105.5 61 75.4
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 8.1e-21 104.8 120 48.3
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 8.1e-21 104.8 57 80.7
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 3.4e-19 99.4 120 43.3
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 4.3e-14 82.4 60 60.0
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 1.9e-09 67.0 34 88.2
Sed0005624 Sechium edule HOM05D006706 ORTHO05D373521 4.3e-06 55.8 60 46.7


User provided reference genes

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