Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010064g0030 Nicotiana tabacum HOM05D000800 ORTHO05D015555 8.0e-100 367.1 183 100.0
Nitab4.5_0002329g0180 Nicotiana tabacum HOM05D000800 ORTHO05D000658 1.8e-43 179.9 242 46.3
Peaxi162Scf00062g10014 Petunia axillaris HOM05D000800 ORTHO05D000658 3.0e-38 162.5 238 45.4
Sopen12g004790 Solanum pennellii HOM05D000800 ORTHO05D000658 2.2e-33 146.4 242 42.6
PGSC0003DMG400007909 Solanum tuberosum HOM05D000800 ORTHO05D000658 6.4e-33 144.8 233 43.8
Solyc12g009910.1 Solanum lycopersicum HOM05D000800 ORTHO05D000658 1.4e-32 143.7 203 44.3
Nitab4.5_0008310g0040 Nicotiana tabacum HOM05D001147 ORTHO05D000823 5.4e-32 141.7 163 52.1
PGSC0003DMG400005989 Solanum tuberosum HOM05D000800 ORTHO05D000658 9.3e-32 141.0 251 40.6
Peaxi162Scf00062g00110 Petunia axillaris HOM05D000800 ORTHO05D000658 4.6e-31 138.7 236 43.2
PGSC0003DMG400005960 Solanum tuberosum HOM05D000800 ORTHO05D000658 3.9e-30 135.6 246 39.8
CAN.G551.58 Capsicum annuum HOM05D000800 ORTHO05D015555 2.6e-26 122.9 201 42.3
Sopen12g004810 Solanum pennellii HOM05D000800 ORTHO05D000658 3.4e-26 122.5 238 38.2
Peaxi162Scf00185g00071 Petunia axillaris HOM05D000800 ORTHO05D000658 4.5e-26 122.1 226 38.1
CAN.G551.61 Capsicum annuum HOM05D000800 ORTHO05D015555 8.4e-25 117.9 174 43.7
CAN.G551.63 Capsicum annuum HOM05D000800 ORTHO05D015555 8.4e-25 117.9 174 43.7
PGSC0003DMG400007833 Solanum tuberosum HOM05D000800 ORTHO05D000658 8.4e-25 117.9 236 37.3
Nitab4.5_0010064g0050 Nicotiana tabacum HOM05D000800 ORTHO05D000658 1.4e-24 117.1 69 84.1
PGSC0003DMG400016773 Solanum tuberosum HOM05D000800 ORTHO05D000658 3.2e-24 115.9 235 38.3
Solyc06g062290.1 Solanum lycopersicum HOM05D000800 ORTHO05D000658 5.5e-24 115.2 229 36.2
Sopen06g021510 Solanum pennellii HOM05D000800 ORTHO05D000658 9.3e-24 114.4 229 34.9
Sopen06g021560 Solanum pennellii HOM05D000800 ORTHO05D000658 1.6e-23 113.6 235 37.0
Solyc12g009940.2 Solanum lycopersicum HOM05D000800 ORTHO05D000658 4.6e-23 112.1 235 36.6
CAN.G107.23 Capsicum annuum HOM05D000800 ORTHO05D015555 7.9e-23 111.3 206 38.3
Sopen12g004820 Solanum pennellii HOM05D000800 ORTHO05D000658 1.8e-22 110.2 236 36.4
Peaxi162Scf00185g00084 Petunia axillaris HOM05D000800 ORTHO05D000658 5.1e-22 108.6 207 38.6
Nitab4.5_0003443g0020 Nicotiana tabacum HOM05D000800 ORTHO05D000658 6.7e-22 108.2 57 84.2
PGSC0003DMG400007908 Solanum tuberosum HOM05D000800 ORTHO05D015555 1.5e-21 107.1 78 67.9
Nitab4.5_0003443g0030 Nicotiana tabacum HOM05D000800 ORTHO05D284728 1.3e-20 104.0 167 44.9
CAN.G551.64 Capsicum annuum HOM05D000800 ORTHO05D015555 2.8e-20 102.8 79 68.4
Solyc12g009930.3 Solanum lycopersicum HOM05D000800 ORTHO05D000658 1.2e-18 97.4 149 41.6
CAN.G551.55 Capsicum annuum HOM05D000800 ORTHO05D015555 2.6e-18 96.3 74 66.2
Nitab4.5_0001073g0010 Nicotiana tabacum HOM05D000800 ORTHO05D000658 4.6e-15 85.5 229 32.3
Nitab4.5_0004232g0040 Nicotiana tabacum HOM05D000800 ORTHO05D000658 6.0e-15 85.1 235 33.2
Nitab4.5_0008310g0080 Nicotiana tabacum HOM05D000800 ORTHO05D015555 1.5e-13 80.5 125 43.2
Nitab4.5_0003443g0010 Nicotiana tabacum HOM05D000800 ORTHO05D015555 3.3e-13 79.3 77 59.7
PGSC0003DMG400028331 Solanum tuberosum HOM05D000800 ORTHO05D000658 6.3e-12 75.1 238 28.2
Cc06_g17810 Coffea canephora HOM05D000800 ORTHO05D000658 1.1e-11 74.3 209 28.2
Peaxi162Scf00130g00727 Petunia axillaris HOM05D000800 ORTHO05D000658 1.4e-11 73.9 242 26.0
Sopen06g021530 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-11 73.2 66 57.6
Cc06_g17780 Coffea canephora HOM05D000800 ORTHO05D000658 9.0e-11 71.2 238 27.3
Solyc05g012670.2 Solanum lycopersicum HOM05D000800 ORTHO05D000658 1.2e-10 70.9 222 27.0
Lj1A1128T59 Lonicera japonica HOM05D000800 ORTHO05D000658 7.7e-10 68.2 226 24.3
Sopen05g007500 Solanum pennellii HOM05D000800 ORTHO05D000658 1.0e-09 67.8 222 27.5
Peaxi162Scf00130g00615 Petunia axillaris HOM05D000800 ORTHO05D000658 1.7e-09 67.0 233 24.5
PGSC0003DMG400027261 Solanum tuberosum HOM05D000800 ORTHO05D000658 2.2e-09 66.6 247 27.1
Nitab4.5_0006870g0060 Nicotiana tabacum HOM05D000800 ORTHO05D000658 5.0e-09 65.5 181 25.4
Cc06_g17790 Coffea canephora HOM05D000800 ORTHO05D000658 6.5e-09 65.1 237 26.6
Lsat_1_v5_gn_8_20741 Lactuca sativa HOM05D000800 ORTHO05D000658 1.1e-08 64.3 248 23.0
Lj1g0015209 Lotus japonicus HOM05D000800 ORTHO05D000658 1.1e-08 64.3 72 47.2
Nitab4.5_0001598g0050 Nicotiana tabacum HOM05D000800 ORTHO05D000658 1.4e-08 63.9 243 27.2
Peaxi162Scf00069g00091 Petunia axillaris HOM05D000800 ORTHO05D000658 1.4e-08 63.9 243 28.0
TAR623G0875 Trochodendron aralioides HOM05D000800 ORTHO05D000658 1.4e-08 63.9 242 26.0
Peaxi162Scf00460g00089 Petunia axillaris HOM05D000800 ORTHO05D000658 1.9e-08 63.5 178 33.7
Actinidia17231 Actinidia chinensis HOM05D000800 ORTHO05D000658 2.5e-08 63.2 227 25.1
Lj1g0018041 Lotus japonicus HOM05D000800 ORTHO05D000658 2.5e-08 63.2 72 45.8
RcHm_v2.0_Chr3g0483281 Rosa chinensis HOM05D000800 ORTHO05D000658 2.5e-08 63.2 73 46.6
RcHm_v2.0_Chr3g0483301 Rosa chinensis HOM05D000800 ORTHO05D000658 2.5e-08 63.2 73 46.6
TAR623G1358 Trochodendron aralioides HOM05D000800 ORTHO05D000658 4.2e-08 62.4 242 26.9
Cc06_g17840 Coffea canephora HOM05D000800 ORTHO05D000658 5.5e-08 62.0 241 24.1
ECA236G1657 Erigeron canadensis HOM05D000800 ORTHO05D000658 5.5e-08 62.0 68 47.1
Lju124C47T9 Lonicera japonica HOM05D000800 ORTHO05D000658 5.5e-08 62.0 247 24.7
PGSC0003DMG400029490 Solanum tuberosum HOM05D000800 ORTHO05D000658 7.2e-08 61.6 221 26.7
TAR623G1563 Trochodendron aralioides HOM05D000800 ORTHO05D000658 7.2e-08 61.6 242 26.9
Nn7g36364 Nelumbo nucifera HOM05D000800 ORTHO05D000658 9.4e-08 61.2 245 25.3
VMungo0720G1091 Vigna mungo HOM05D000800 ORTHO05D000658 9.4e-08 61.2 241 25.7
arahy.Tifrunner.gnm1.ann1.P44SU2 Arachis hypogaea HOM05D000800 ORTHO05D000658 1.2e-07 60.8 68 44.1
Dinv39649 Davidia involucrata HOM05D000800 ORTHO05D000658 1.6e-07 60.5 68 45.6
Lj1g0013703 Lotus japonicus HOM05D000800 ORTHO05D000658 1.6e-07 60.5 72 44.4
Lj1g0014612 Lotus japonicus HOM05D000800 ORTHO05D000658 1.6e-07 60.5 72 44.4
Lalb_Chr06g0173471 Lupinus albus HOM05D000800 ORTHO05D000658 1.6e-07 60.5 68 48.5
Phvul.008G103900 Phaseolus vulgaris HOM05D000800 ORTHO05D000658 1.6e-07 60.5 68 41.2
CSS0011526 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 2.1e-07 60.1 228 26.8
CSS0048325 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 2.1e-07 60.1 228 26.8
Cfa016790 Carpinus fangiana HOM05D000800 ORTHO05D000658 2.1e-07 60.1 69 47.8
Haze_19812 Corylus avellana HOM05D000800 ORTHO05D000658 2.1e-07 60.1 67 49.3
Haze_19815 Corylus avellana HOM05D000800 ORTHO05D000658 2.1e-07 60.1 67 49.3
HanXRQChr13g0393311 Helianthus annuus HOM05D000800 ORTHO05D000658 2.1e-07 60.1 236 25.8
Lalb_Chr06g0173481 Lupinus albus HOM05D000800 ORTHO05D000658 2.1e-07 60.1 74 44.6
Sopen10g029980 Solanum pennellii HOM05D000800 ORTHO05D000658 2.1e-07 60.1 183 29.0
FAN09G4782 Fragaria x ananassa HOM05D000800 ORTHO05D000658 2.7e-07 59.7 71 43.7
Dinv02798 Davidia involucrata HOM05D000800 ORTHO05D000658 3.6e-07 59.3 68 44.1
Lj1g0007448 Lotus japonicus HOM05D000800 ORTHO05D000658 3.6e-07 59.3 74 43.2
SalBow1G6475 Salvia bowleyana HOM05D000800 ORTHO05D000658 3.6e-07 59.3 212 23.6
FvH4_6g24360 Fragaria vesca HOM05D000800 ORTHO05D000658 4.6e-07 58.9 71 43.7
FAN02G1617 Fragaria x ananassa HOM05D000800 ORTHO05D000658 4.6e-07 58.9 71 43.7
Nitab4.5_0000082g0170 Nicotiana tabacum HOM05D000800 ORTHO05D000658 4.6e-07 58.9 245 26.1
CSS0038690 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 6.1e-07 58.5 228 26.3
Manes.09G018300 Manihot esculenta HOM05D000800 ORTHO05D000658 6.1e-07 58.5 68 48.5
QL07p002892 Quercus lobata HOM05D000800 ORTHO05D000658 6.1e-07 58.5 67 47.8
HanXRQChr10g0283371 Helianthus annuus HOM05D000800 ORTHO05D000658 7.9e-07 58.2 68 42.6
AUR62024482 Chenopodium quinoa HOM05D000800 ORTHO05D000658 1.0e-06 57.8 164 32.3
DCAR_009752 Daucus carota HOM05D000800 ORTHO05D000658 1.0e-06 57.8 78 42.3
Lsat_1_v5_gn_5_162041 Lactuca sativa HOM05D000800 ORTHO05D000658 1.0e-06 57.8 156 26.9
Potri.016G057300 Populus trichocarpa HOM05D000800 ORTHO05D000658 1.0e-06 57.8 67 44.8
AUR62024484 Chenopodium quinoa HOM05D000800 ORTHO05D000658 1.4e-06 57.4 233 26.2
HanXRQChr10g0297911 Helianthus annuus HOM05D000800 ORTHO05D000658 1.4e-06 57.4 64 43.8
Lsat_1_v5_gn_5_160161 Lactuca sativa HOM05D000800 ORTHO05D000658 1.4e-06 57.4 83 34.9
Lsat_1_v5_gn_5_160181 Lactuca sativa HOM05D000800 ORTHO05D000658 1.4e-06 57.4 83 34.9
Lsat_1_v5_gn_5_160601 Lactuca sativa HOM05D000800 ORTHO05D000658 1.8e-06 57.0 89 38.2
Manes.08G052700 Manihot esculenta HOM05D000800 ORTHO05D000658 1.8e-06 57.0 68 47.1
ECA248G1161 Erigeron canadensis HOM05D000800 ORTHO05D000658 2.3e-06 56.6 230 23.9
HanXRQChr10g0283391 Helianthus annuus HOM05D000800 ORTHO05D000658 2.3e-06 56.6 68 41.2
Lsat_1_v5_gn_5_162100 Lactuca sativa HOM05D000800 ORTHO05D000658 2.3e-06 56.6 83 34.9
Phvul.007G251100 Phaseolus vulgaris HOM05D000800 ORTHO05D000658 2.3e-06 56.6 240 25.8
Potri.006G047200 Populus trichocarpa HOM05D000800 ORTHO05D000658 2.3e-06 56.6 67 43.3
QL07p002818 Quercus lobata HOM05D000800 ORTHO05D000658 2.3e-06 56.6 67 46.3
TAR623G0317 Trochodendron aralioides HOM05D000800 ORTHO05D000658 2.3e-06 56.6 242 25.2
Hma1.2p1_0110F.1_g052730 Hydrangea macrophylla HOM05D000800 ORTHO05D000658 3.0e-06 56.2 123 34.1
Hma1.2p1_1279F.1_g272485 Hydrangea macrophylla HOM05D000800 ORTHO05D000658 3.0e-06 56.2 122 32.8
Peaxi162Scf00002g00284 Petunia axillaris HOM05D000800 ORTHO05D000658 3.0e-06 56.2 247 25.1
PGSC0003DMG400029497 Solanum tuberosum HOM05D000800 ORTHO05D000658 3.0e-06 56.2 222 26.6
Sabra16G0060300 Salix brachista HOM05D000800 ORTHO05D000658 3.9e-06 55.8 67 43.3
CSS0002451 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 5.1e-06 55.5 67 38.8
CSS0019832 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 5.1e-06 55.5 67 38.8
CsaV3_4G028910 Cucumis sativus L. HOM05D000800 ORTHO05D000658 5.1e-06 55.5 67 41.8
Oeu023119.1 Olea europaea HOM05D000800 ORTHO05D000658 5.1e-06 55.5 78 35.9
CSS0019374 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 6.7e-06 55.1 229 25.3
CAN.G107.24 Capsicum annuum HOM05D000800 ORTHO05D015555 6.7e-06 55.1 66 50.0
MELO3C019186.2 Cucumis melo HOM05D000800 ORTHO05D000658 6.7e-06 55.1 67 38.8
DCAR_025266 Daucus carota HOM05D000800 ORTHO05D000658 6.7e-06 55.1 242 24.4
Nitab4.5_0000636g0120 Nicotiana tabacum HOM05D000800 ORTHO05D000658 6.7e-06 55.1 66 37.9
PGSC0003DMG400008137 Solanum tuberosum HOM05D000800 ORTHO05D000658 6.7e-06 55.1 246 22.4
vmacro21975 Vaccinium macrocarpon HOM05D000800 ORTHO05D000658 6.7e-06 55.1 71 42.3
HanXRQChr01g0008691 Helianthus annuus HOM05D000800 ORTHO05D000658 8.8e-06 54.7 151 30.5
HanXRQChr01g0008891 Helianthus annuus HOM05D000800 ORTHO05D000658 8.8e-06 54.7 156 28.2
Peaxi162Scf00002g03214 Petunia axillaris HOM05D000800 ORTHO05D000658 8.8e-06 54.7 72 38.9
PGSC0003DMG400029489 Solanum tuberosum HOM05D000800 ORTHO05D000658 8.8e-06 54.7 210 25.2
VMungo0720G2090 Vigna mungo HOM05D000800 ORTHO05D000658 8.8e-06 54.7 250 24.0
VMungo0720G2536 Vigna mungo HOM05D000800 ORTHO05D000658 8.8e-06 54.7 81 38.3


User provided reference genes

Program Settings