Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 2.3e-150 535.4 251 100.0
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 2.6e-149 531.9 251 98.8
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 1.1e-144 516.5 251 95.6
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 1.5e-144 516.2 251 95.6
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 3.2e-144 515.0 251 95.2
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 4.2e-144 514.6 251 94.4
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 8.0e-143 510.4 251 95.2
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 3.4e-125 451.8 251 83.3
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 4.6e-122 441.4 251 79.7
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 2.3e-121 439.1 251 79.7
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 5.0e-121 438.0 250 80.0
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 5.0e-121 438.0 251 81.3
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 3.6e-119 431.8 251 78.1
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 4.7e-119 431.4 251 77.7
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 1.4e-118 429.9 251 76.5
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.4e-118 429.9 251 76.5
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 1.8e-118 429.5 249 77.9
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 3.1e-118 428.7 251 78.1
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 8.9e-118 427.2 251 76.9
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 8.9e-118 427.2 252 80.2
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.2e-117 426.8 251 76.1
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.5e-117 426.4 251 76.9
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 1.5e-117 426.4 251 76.9
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 2.0e-117 426.0 251 76.9
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 2.6e-117 425.6 252 78.2
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 3.7e-116 421.8 251 75.3
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 3.7e-116 421.8 251 75.3
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 3.2e-115 418.7 251 76.1
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 3.2e-115 418.7 251 75.3
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 4.1e-115 418.3 251 75.3
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 7.8e-114 414.1 250 74.4
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 1.7e-113 412.9 251 75.3
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 1.7e-113 412.9 251 74.5
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 2.3e-113 412.5 251 74.1
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 3.0e-113 412.1 251 75.3
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 3.9e-113 411.8 251 76.1
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 6.6e-113 411.0 251 75.3
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 8.6e-113 410.6 238 78.2
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 4.3e-112 408.3 251 75.3
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 3.6e-111 405.2 251 74.9
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 3.6e-111 405.2 251 74.5
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 5.2e-110 401.4 251 72.5
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 8.9e-110 400.6 251 74.5
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 7.6e-109 397.5 251 72.5
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 7.6e-109 397.5 251 70.9
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 3.7e-108 395.2 251 72.5
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 6.4e-108 394.4 253 72.3
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 6.4e-108 394.4 255 71.4
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 6.4e-108 394.4 251 72.5
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 1.1e-107 393.7 253 71.9
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 4.1e-107 391.7 251 72.5
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 5.4e-107 391.3 251 72.5
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 5.4e-107 391.3 251 72.9
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 1.6e-106 389.8 253 71.1
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 2.7e-106 389.0 251 70.9
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 6.0e-106 387.9 251 71.3
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 7.8e-106 387.5 253 71.5
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 1.7e-105 386.3 253 70.4
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 1.1e-104 383.6 251 68.9
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 4.3e-104 381.7 251 69.7
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 5.6e-104 381.3 253 68.0
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 7.3e-104 380.9 253 69.6
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 1.2e-103 380.2 253 69.6
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 6.2e-103 377.9 251 68.5
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 6.2e-103 377.9 253 68.4
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 8.1e-103 377.5 251 68.5
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 1.1e-102 377.1 253 68.4
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.4e-102 376.7 251 68.9
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 5.2e-102 374.8 251 68.1
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 8.9e-102 374.0 251 70.1
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 3.4e-101 372.1 251 66.9
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 7.6e-101 370.9 251 70.9
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 2.2e-100 369.4 250 68.4
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 3.8e-100 368.6 249 67.1
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 1.4e-99 366.7 229 74.2
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 3.2e-99 365.5 252 67.1
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 5.4e-99 364.8 253 66.8
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 3.9e-97 358.6 246 67.5
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 3.3e-96 355.5 254 65.7
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 3.3e-96 355.5 246 68.3
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 3.3e-96 355.5 253 65.6
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 7.3e-96 354.4 247 66.4
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 3.6e-95 352.1 253 65.2
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 3.6e-95 352.1 253 64.0
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 3.6e-95 352.1 253 64.0
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 3.6e-95 352.1 253 64.0
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 3.6e-95 352.1 253 64.0
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 4.8e-95 351.7 253 64.0
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 1.1e-94 350.5 253 64.4
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 1.4e-94 350.1 263 63.5
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 1.4e-94 350.1 248 65.3
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 1.4e-94 350.1 253 64.8
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 4.0e-94 348.6 253 65.2
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 5.8e-93 344.7 253 62.8
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 7.6e-93 344.4 253 63.2
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 3.5e-90 335.5 247 61.1
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 1.3e-89 333.6 251 62.2
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 1.7e-89 333.2 202 74.3
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 8.1e-87 324.3 238 60.9
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 3.2e-75 285.8 246 55.7
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 7.1e-75 284.6 249 55.0
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 2.7e-74 282.7 248 54.0
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 5.1e-73 278.5 248 55.2
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 1.5e-72 276.9 248 54.8
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 4.8e-71 271.9 251 53.0
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 3.1e-70 269.2 282 54.6
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 3.8e-68 262.3 154 72.1
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 2.0e-61 240.0 140 82.9
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 2.0e-61 240.0 268 46.3
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 1.7e-60 236.9 252 44.8
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 1.2e-58 230.7 259 49.4
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 5.9e-53 211.8 112 82.1
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 1.5e-40 170.6 100 84.0
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 9.1e-38 161.4 100 80.0
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 7.0e-30 135.2 154 52.6
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 1.3e-28 131.0 96 65.6
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 1.5e-24 117.5 70 65.7
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 5.6e-19 99.0 54 72.2
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 8.9e-17 91.7 52 69.2
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 3.9e-12 76.3 45 68.9
Mapoly0033s0071 Marchantia polymorpha HOM05D006599 ORTHO05D008304 2.0e-08 63.9 183 24.6
FAN22G0851 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.1e-06 58.2 110 30.0
FAN07G2804 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.4e-06 57.8 110 30.0
FvH4_4g15570 Fragaria vesca HOM05D007529 ORTHO05D007451 4.1e-06 56.2 110 30.0
Manes.09G016732 Manihot esculenta HOM05D007529 ORTHO05D007451 4.1e-06 56.2 111 29.7
Manes.09G016600 Manihot esculenta HOM05D007529 ORTHO05D007451 7.0e-06 55.5 111 29.7
FAN17G0712 Fragaria x ananassa HOM05D007529 ORTHO05D007451 9.2e-06 55.1 110 28.2


User provided reference genes

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