Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 4.4e-125 451.4 253 100.0
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 4.6e-90 335.1 253 79.1
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 1.8e-86 323.2 277 69.7
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 5.3e-86 321.6 273 70.7
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 1.5e-85 320.1 263 71.9
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 3.1e-78 295.8 274 66.4
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 6.3e-55 218.4 181 70.2
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 4.9e-47 192.2 151 74.8
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 6.3e-47 191.8 291 49.5
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 4.1e-46 189.1 288 48.6
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 3.5e-45 186.0 272 46.7
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 1.7e-44 183.7 275 47.6
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 1.5e-43 180.6 280 45.4
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 1.9e-43 180.3 169 63.3
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 1.9e-43 180.3 183 60.7
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 3.3e-43 179.5 167 61.1
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 4.3e-43 179.1 151 70.2
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 8.0e-42 174.9 298 45.6
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 8.0e-42 174.9 167 62.9
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 8.0e-42 174.9 167 62.9
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 1.0e-41 174.5 152 64.5
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 1.0e-41 174.5 182 57.1
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 4.0e-41 172.6 154 64.3
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 6.8e-41 171.8 182 56.0
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 2.0e-40 170.2 287 48.1
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 9.8e-40 167.9 177 59.9
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 1.7e-39 167.2 170 60.6
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 6.4e-39 165.2 183 58.5
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 5.4e-38 162.2 250 43.6
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 5.4e-38 162.2 249 50.2
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 5.4e-38 162.2 158 62.0
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 7.0e-38 161.8 151 63.6
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 1.2e-37 161.0 185 56.8
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 1.2e-37 161.0 170 61.8
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 2.0e-37 160.2 164 58.5
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 2.7e-37 159.8 267 45.7
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 2.7e-37 159.8 219 49.8
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 2.7e-37 159.8 245 49.4
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 3.5e-37 159.5 230 46.5
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 4.6e-37 159.1 255 45.1
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 1.3e-36 157.5 268 46.3
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 1.7e-36 157.1 150 64.0
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 5.0e-36 155.6 252 46.4
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 5.0e-36 155.6 234 47.9
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 6.6e-36 155.2 187 54.5
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 6.6e-36 155.2 260 46.9
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 8.6e-36 154.8 129 65.9
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 8.6e-36 154.8 173 55.5
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 8.6e-36 154.8 216 48.1
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 8.6e-36 154.8 156 60.3
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 1.1e-35 154.5 156 56.4
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 1.1e-35 154.5 156 57.1
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 1.5e-35 154.1 263 45.6
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 1.9e-35 153.7 156 60.3
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.9e-35 153.7 156 60.3
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 1.9e-35 153.7 152 62.5
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 5.6e-35 152.1 156 60.3
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 5.6e-35 152.1 137 64.2
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 7.3e-35 151.8 181 55.8
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 7.3e-35 151.8 257 44.4
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 9.5e-35 151.4 173 53.8
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 9.5e-35 151.4 251 47.4
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 2.1e-34 150.2 257 44.7
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 2.1e-34 150.2 153 59.5
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 2.8e-34 149.8 171 55.0
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 4.7e-34 149.1 158 57.6
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 4.7e-34 149.1 158 57.6
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 4.7e-34 149.1 272 46.7
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 4.7e-34 149.1 265 45.3
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 6.2e-34 148.7 188 52.1
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 6.2e-34 148.7 182 53.8
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 8.0e-34 148.3 158 57.6
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 8.0e-34 148.3 257 42.8
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 1.4e-33 147.5 184 54.9
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 2.3e-33 146.7 182 53.3
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 4.0e-33 146.0 287 39.7
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 4.0e-33 146.0 285 41.8
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 4.0e-33 146.0 145 56.6
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 6.8e-33 145.2 281 40.2
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 6.8e-33 145.2 189 50.8
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 8.9e-33 144.8 184 50.5
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.2e-32 144.4 248 45.2
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 1.5e-32 144.1 255 42.7
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 1.5e-32 144.1 153 57.5
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 2.0e-32 143.7 149 56.4
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 5.8e-32 142.1 154 55.2
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 5.8e-32 142.1 151 57.6
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 3.7e-31 139.4 130 62.3
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 3.7e-31 139.4 270 40.7
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 6.4e-31 138.7 251 43.0
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 2.4e-30 136.7 140 57.9
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 3.2e-30 136.3 141 60.3
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 7.0e-30 135.2 129 61.2
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 9.2e-30 134.8 217 44.2
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 3.5e-29 132.9 224 42.4
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 6.0e-29 132.1 209 46.4
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 6.0e-29 132.1 241 43.6
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 6.0e-29 132.1 209 46.4
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 6.0e-29 132.1 241 43.6
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 6.0e-29 132.1 139 55.4
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 3.0e-28 129.8 229 41.9
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 3.9e-28 129.4 130 54.6
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 1.6e-26 124.0 109 64.2
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 2.5e-19 100.1 147 49.0
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 7.3e-19 98.6 96 60.4
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 1.2e-18 97.8 94 59.6
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.7e-18 95.9 94 60.6
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 1.2e-16 91.3 192 35.4
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 7.6e-16 88.6 64 71.9
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 7.6e-16 88.6 64 71.9
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.2e-15 87.0 60 75.0
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 4.9e-15 85.9 121 42.1
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 1.4e-14 84.3 130 40.0
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 3.2e-14 83.2 108 55.6
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 4.1e-14 82.8 108 43.5
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 1.3e-12 77.8 55 72.7
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 6.2e-10 68.9 95 49.5
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 3.1e-09 66.6 62 58.1
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 6.9e-09 65.5 65 58.5
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 2.4e-06 57.0 61 54.1


User provided reference genes

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