Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010033g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009316 5.9e-152 540.8 267 100.0
Peaxi162Scf00651g00626 Petunia axillaris HOM05D004909 ORTHO05D009316 6.6e-111 404.4 276 77.2
Nitab4.5_0001526g0140 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.5e-75 287.0 200 76.0
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 1.2e-72 277.3 295 49.5
Nitab4.5_0004300g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 2.5e-70 269.6 147 89.8
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 1.1e-62 244.2 295 45.4
Sed0007601 Sechium edule HOM05D004909 ORTHO05D009316 2.5e-62 243.0 296 48.0
THA.LOC109116692 Tarenaya hassleriana HOM05D004909 ORTHO05D009316 2.5e-57 226.5 264 48.1
Sc13g0007740 Simmondsia chinensis HOM05D004909 ORTHO05D009316 1.0e-55 221.1 286 43.4
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 3.1e-52 209.5 274 44.5
AUR62042355 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.2e-50 203.4 264 41.3
AUR62043789 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.2e-50 203.4 264 41.3
AUR62043900 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.2e-50 203.4 264 41.3
EL10Ac7g16726 Beta vulgaris HOM05D004909 ORTHO05D009316 6.5e-50 201.8 298 38.9
Aqoxy2G02244 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 1.5e-46 190.7 265 43.4
Aqoxy3G01127 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 1.5e-46 190.7 265 43.4
Glyma.15G187700 Glycine max HOM05D004909 ORTHO05D009316 1.5e-46 190.7 299 39.5
AUR62026823 Chenopodium quinoa HOM05D004909 ORTHO05D009316 5.7e-46 188.7 259 39.0
SHI35584 Sapria himalayana HOM05D004909 ORTHO05D009316 1.3e-45 187.6 252 41.7
Nitab4.5_0003083g0030 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.1e-44 184.5 104 90.4
HPP92_026900 Vanilla planifolia HOM05D004909 ORTHO05D009316 1.4e-41 174.1 158 56.3
Lj2A1227T106 Lonicera japonica HOM05D004909 ORTHO05D009316 1.9e-41 173.7 153 55.6
DCAR_032462 Daucus carota HOM05D004909 ORTHO05D009316 2.5e-41 173.3 283 40.6
Lalb_Chr00c21g0405621 Lupinus albus HOM05D004909 ORTHO05D009316 9.4e-41 171.4 159 55.3
vmacro17405 Vaccinium macrocarpon HOM05D004909 ORTHO05D009316 1.6e-40 170.6 152 55.9
Sed0025836 Sechium edule HOM05D004909 ORTHO05D009316 1.8e-39 167.2 152 57.2
Nitab4.5_0001796g0070 Nicotiana tabacum HOM05D004909 ORTHO05D009316 4.3e-38 162.5 90 91.1
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 2.0e-35 153.7 129 58.9
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 2.6e-35 153.3 247 39.3
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.5e-33 146.7 298 32.6
TWI14G0838 Tripterygium wilfordii HOM05D004909 ORTHO05D009316 1.2e-32 144.4 242 37.6
SHI44820 Sapria himalayana HOM05D004909 ORTHO05D009316 3.9e-31 139.4 106 60.4
Nitab4.5_0000351g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 5.1e-31 139.0 68 91.2
Lalb_Chr11g0070061 Lupinus albus HOM05D004909 ORTHO05D009316 5.7e-30 135.6 124 54.0
CAN.G505.15 Capsicum annuum HOM05D004909 ORTHO05D009316 1.7e-29 134.0 149 47.7
SHI44822 Sapria himalayana HOM05D004909 ORTHO05D009316 2.6e-27 126.7 77 74.0
Nitab4.5_0000009g0130 Nicotiana tabacum HOM05D000762 ORTHO05D009316 4.5e-27 125.9 81 79.0
Nitab4.5_0002939g0010 Nicotiana tabacum HOM05D000762 ORTHO05D002448 4.5e-27 125.9 79 81.0
EL10Ac1g02201 Beta vulgaris HOM05D004909 ORTHO05D009316 6.5e-26 122.1 249 36.1
CsaV3_UNG209050 Cucumis sativus L. HOM05D004909 ORTHO05D009316 3.2e-25 119.8 112 56.2
Sc02g0004080 Simmondsia chinensis HOM05D004909 ORTHO05D009316 2.3e-23 113.6 127 52.0
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 5.7e-22 109.0 183 38.8
EL10Ac7g16568 Beta vulgaris HOM05D004909 ORTHO05D009316 7.5e-22 108.6 94 55.3
EL10As18g24157 Beta vulgaris HOM05D004909 ORTHO05D009316 7.5e-22 108.6 94 55.3
Peaxi162Scf00456g00034 Petunia axillaris HOM05D004909 ORTHO05D009316 2.2e-21 107.1 123 43.9
PGR044G0991 Punica granatum HOM05D004909 ORTHO05D009316 3.7e-21 106.3 69 68.1
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 4.8e-21 105.9 212 34.4
CAN.G7.24 Capsicum annuum HOM05D004909 ORTHO05D009316 9.1e-20 101.7 124 40.3
Solyc03g013470.1 Solanum lycopersicum HOM05D004909 ORTHO05D009316 2.0e-19 100.5 79 59.5
AUR62043914 Chenopodium quinoa HOM05D000533 ORTHO05D001069 5.9e-19 99.0 118 46.6
AUR62042356 Chenopodium quinoa HOM05D004909 ORTHO05D009316 6.1e-16 89.0 110 46.4
CAN.G733.11 Capsicum annuum HOM05D004909 ORTHO05D009316 6.8e-15 85.5 84 52.4
AUR62037530 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.4e-12 77.8 134 35.8
Nitab4.5_0000081g0150 Nicotiana tabacum HOM05D004909 ORTHO05D009625 1.2e-11 74.7 93 46.2
COL.COLO4_04384 Corchorus olitorius HOM05D004909 ORTHO05D009316 2.2e-10 70.5 52 57.7
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 6.5e-10 68.9 80 45.0
Potri.007G061821 Populus trichocarpa HOM05D004909 ORTHO05D009316 6.1e-08 62.4 51 58.8


User provided reference genes

Program Settings