Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009995g0020 Nicotiana tabacum HOM05D003074 ORTHO05D002434 6.2e-73 277.3 137 100.0
Nitab4.5_0000653g0010 Nicotiana tabacum HOM05D003074 ORTHO05D002434 1.2e-52 209.9 115 93.0
PGSC0003DMG400001089 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.9e-21 106.3 99 62.6
Peaxi162Scf01097g00039 Petunia axillaris HOM05D003074 ORTHO05D002434 2.7e-20 102.4 92 62.0
Nitab4.5_0009995g0010 Nicotiana tabacum HOM05D003074 ORTHO05D002434 4.5e-15 85.1 57 80.7
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 1.5e-13 80.1 96 46.9
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 7.2e-13 77.8 106 47.2
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 1.6e-12 76.6 102 42.2
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 3.6e-12 75.5 97 44.3
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 2.3e-11 72.8 101 42.6
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 1.5e-10 70.1 113 36.3
Nitab4.5_0009781g0010 Nicotiana tabacum HOM05D003074 ORTHO05D002434 2.0e-10 69.7 89 52.8
Oeu007582.1 Olea europaea HOM05D003074 ORTHO05D002434 2.0e-10 69.7 91 45.1
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.6e-10 69.3 97 43.3
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 2.6e-10 69.3 91 42.9
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 3.4e-10 68.9 109 38.5
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 4.4e-10 68.6 105 41.9
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 5.7e-10 68.2 106 41.5
Dinv22264 Davidia involucrata HOM05D003074 ORTHO05D002434 5.7e-10 68.2 94 43.6
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 5.7e-10 68.2 97 43.3
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 5.7e-10 68.2 97 43.3
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 7.5e-10 67.8 86 50.0
Actinidia35342 Actinidia chinensis HOM05D003074 ORTHO05D002434 9.8e-10 67.4 85 48.2
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 1.3e-09 67.0 96 41.7
Atru.chr2.3400 Acer truncatum HOM05D003074 ORTHO05D002434 1.7e-09 66.6 119 36.1
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 2.2e-09 66.2 103 39.8
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 2.8e-09 65.9 91 42.9
Solyc12g005000.1 Solanum lycopersicum HOM05D003074 ORTHO05D002434 2.8e-09 65.9 89 50.6
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 2.8e-09 65.9 97 44.3
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 2.8e-09 65.9 102 43.1
Cc05_g13710 Coffea canephora HOM05D003074 ORTHO05D002434 3.7e-09 65.5 115 40.9
Cc09_g09730 Coffea canephora HOM05D003074 ORTHO05D002434 3.7e-09 65.5 113 43.4
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 4.8e-09 65.1 97 43.3
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 4.8e-09 65.1 98 42.9
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 6.3e-09 64.7 95 44.2
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 8.3e-09 64.3 92 43.5
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 8.3e-09 64.3 99 39.4
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 1.1e-08 63.9 103 40.8
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 1.1e-08 63.9 102 41.2
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 1.4e-08 63.5 93 45.2
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.4e-08 63.5 99 43.4
PGSC0003DMG400029820 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.4e-08 63.5 95 48.4
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 1.8e-08 63.2 99 42.4
AUR62015774 Chenopodium quinoa HOM05D003074 ORTHO05D002434 1.8e-08 63.2 94 43.6
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 1.8e-08 63.2 104 37.5
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 2.4e-08 62.8 104 40.4
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 3.1e-08 62.4 93 40.9
AUR62020444 Chenopodium quinoa HOM05D003074 ORTHO05D002434 4.1e-08 62.0 94 42.6
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 4.1e-08 62.0 101 42.6
Sc03g0008600 Simmondsia chinensis HOM05D003074 ORTHO05D002434 4.1e-08 62.0 95 41.1
PGSC0003DMG400032292 Solanum tuberosum HOM05D003074 ORTHO05D002434 4.1e-08 62.0 95 47.4
CiPaw.11G189000 Carya illinoinensis HOM05D003074 ORTHO05D002434 5.4e-08 61.6 118 36.4
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 7.0e-08 61.2 100 40.0
PGSC0003DMG400031876 Solanum tuberosum HOM05D003074 ORTHO05D002434 9.1e-08 60.8 95 47.4
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 1.6e-07 60.1 95 41.1
Aqoxy1G02175 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 2.7e-07 59.3 106 33.0
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 2.7e-07 59.3 108 37.0
FvH4_3g22640 Fragaria vesca HOM05D003074 ORTHO05D002434 2.7e-07 59.3 114 36.0
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 2.7e-07 59.3 99 41.4
ClCG05G014310 Citrullus lanatus HOM05D003074 ORTHO05D002434 3.5e-07 58.9 91 38.5
RcHm_v2.0_Chr5g0039411 Rosa chinensis HOM05D003074 ORTHO05D002434 4.5e-07 58.5 116 36.2
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 5.9e-07 58.2 94 39.4
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 5.9e-07 58.2 98 40.8
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 5.9e-07 58.2 100 36.0
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 5.9e-07 58.2 92 35.9
Atru.chr2.3399 Acer truncatum HOM05D003074 ORTHO05D002434 7.7e-07 57.8 113 34.5
DCAR_022560 Daucus carota HOM05D003074 ORTHO05D002434 7.7e-07 57.8 98 37.8
FAN11G2929 Fragaria x ananassa HOM05D003074 ORTHO05D002434 7.7e-07 57.8 114 35.1
CiPaw.10G070500 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.0e-06 57.4 112 35.7
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 1.0e-06 57.4 100 36.0
FAN16G0504 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.0e-06 57.4 114 35.1
FAN25G2410 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.0e-06 57.4 114 35.1
Rhsim06G0216700 Rhododendron simsii HOM05D003074 ORTHO05D002434 1.0e-06 57.4 88 37.5
ECA240G4169 Erigeron canadensis HOM05D003074 ORTHO05D002434 1.7e-06 56.6 85 40.0
Lsat_1_v5_gn_9_93960 Lactuca sativa HOM05D003074 ORTHO05D002434 1.7e-06 56.6 91 40.7
PGR004G0474 Punica granatum HOM05D003074 ORTHO05D002434 1.7e-06 56.6 109 34.9
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 2.3e-06 56.2 102 33.3
Migut.H01829 Erythranthe guttata HOM05D003074 ORTHO05D002434 2.3e-06 56.2 105 34.3
Lsat_1_v5_gn_5_6000 Lactuca sativa HOM05D003074 ORTHO05D002434 2.9e-06 55.8 103 39.8
Hma1.2p1_1091F.1_g255850 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 3.8e-06 55.5 93 38.7
MD11G1218800 Malus domestica HOM05D003074 ORTHO05D002434 5.0e-06 55.1 102 34.3
Sopen12g001010 Solanum pennellii HOM05D003074 ORTHO05D002434 5.0e-06 55.1 78 48.7
TAR624G0488 Trochodendron aralioides HOM05D003074 ORTHO05D002434 5.0e-06 55.1 82 43.9
TWI38G1232 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 6.6e-06 54.7 96 33.3
CANSAT56G1803 Cannabis sativa HOM05D003074 ORTHO05D002434 8.6e-06 54.3 105 42.9
FAN21G2959 Fragaria x ananassa HOM05D003074 ORTHO05D002434 8.6e-06 54.3 114 34.2
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 8.6e-06 54.3 93 35.5
Hma1.2p1_1162F.1_g262580 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 8.6e-06 54.3 92 38.0


User provided reference genes

Program Settings