Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009995g0010 Nicotiana tabacum HOM05D003074 ORTHO05D002434 2.5e-59 231.9 115 100.0
PGSC0003DMG400032292 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.9e-22 109.4 96 65.6
PGSC0003DMG400029820 Solanum tuberosum HOM05D003074 ORTHO05D002434 3.2e-22 108.6 96 65.6
PGSC0003DMG400031876 Solanum tuberosum HOM05D003074 ORTHO05D002434 3.5e-21 105.1 96 64.6
Peaxi162Scf01097g00039 Petunia axillaris HOM05D003074 ORTHO05D002434 6.1e-21 104.4 106 56.6
PGSC0003DMG400001089 Solanum tuberosum HOM05D003074 ORTHO05D002434 3.0e-20 102.1 115 54.8
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 3.8e-15 85.1 113 43.4
Nitab4.5_0009995g0020 Nicotiana tabacum HOM05D003074 ORTHO05D002434 3.8e-15 85.1 57 80.7
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 8.5e-15 84.0 112 42.9
Oeu007582.1 Olea europaea HOM05D003074 ORTHO05D002434 3.2e-14 82.0 103 46.6
Nitab4.5_0000653g0010 Nicotiana tabacum HOM05D003074 ORTHO05D002434 4.2e-14 81.6 95 58.9
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 4.6e-13 78.2 82 53.7
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 1.8e-12 76.3 97 46.4
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 3.0e-12 75.5 109 45.9
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 6.7e-12 74.3 85 51.8
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 8.8e-12 73.9 100 47.0
Medtr3g051530 Medicago truncatula HOM05D003074 ORTHO05D002434 1.1e-11 73.6 92 45.7
Dinv22264 Davidia involucrata HOM05D003074 ORTHO05D002434 2.0e-11 72.8 84 50.0
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 2.0e-11 72.8 119 42.0
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 2.5e-11 72.4 107 40.2
Medtr3g051510 Medicago truncatula HOM05D003074 ORTHO05D002434 4.3e-11 71.6 92 45.7
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 4.3e-11 71.6 105 41.9
Actinidia35342 Actinidia chinensis HOM05D003074 ORTHO05D002434 5.7e-11 71.2 50 66.0
Lsat_1_v5_gn_9_93960 Lactuca sativa HOM05D003074 ORTHO05D002434 5.7e-11 71.2 50 64.0
Medtr3g051610 Medicago truncatula HOM05D003074 ORTHO05D002434 5.7e-11 71.2 90 46.7
Hma1.2p1_1091F.1_g255850 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 7.4e-11 70.9 53 64.2
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 7.4e-11 70.9 117 40.2
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 9.7e-11 70.5 65 56.9
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 9.7e-11 70.5 78 44.9
Ah.04g165880 Amaranthus hybridus HOM05D003074 ORTHO05D002434 1.3e-10 70.1 103 44.7
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 1.3e-10 70.1 105 41.0
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 1.7e-10 69.7 97 42.3
Glyma.18G096700 Glycine max HOM05D003074 ORTHO05D002434 1.7e-10 69.7 94 46.8
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.7e-10 69.7 78 48.7
Nitab4.5_0009781g0010 Nicotiana tabacum HOM05D003074 ORTHO05D002434 1.7e-10 69.7 42 85.7
CiPaw.11G189000 Carya illinoinensis HOM05D003074 ORTHO05D002434 2.2e-10 69.3 84 44.0
Hma1.2p1_1162F.1_g262580 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 2.2e-10 69.3 53 62.3
Medtr3g051570 Medicago truncatula HOM05D003074 ORTHO05D002434 2.2e-10 69.3 94 42.6
Aqoxy1G02178 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 2.8e-10 68.9 106 40.6
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 2.8e-10 68.9 59 54.2
TPR.G16595 Trifolium pratense HOM05D003074 ORTHO05D002434 2.8e-10 68.9 93 43.0
ECA240G4169 Erigeron canadensis HOM05D003074 ORTHO05D002434 3.7e-10 68.6 50 64.0
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 4.8e-10 68.2 114 39.5
Medtr5g092710 Medicago truncatula HOM05D003074 ORTHO05D002434 4.8e-10 68.2 88 42.0
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 6.3e-10 67.8 123 35.8
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 6.3e-10 67.8 115 39.1
ATR0752G060 Amborella trichopoda HOM05D003074 ORTHO05D002434 8.2e-10 67.4 106 37.7
Ca_01715_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 8.2e-10 67.4 93 43.0
Ca_30684_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 8.2e-10 67.4 93 43.0
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 8.2e-10 67.4 83 50.6
AUR62020443 Chenopodium quinoa HOM05D003074 ORTHO05D002434 1.1e-09 67.0 109 39.4
MD11G1218800 Malus domestica HOM05D003074 ORTHO05D002434 1.1e-09 67.0 60 55.0
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 1.1e-09 67.0 71 50.7
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.4e-09 66.6 114 42.1
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 1.4e-09 66.6 114 42.1
Phvul.006G043100 Phaseolus vulgaris HOM05D003074 ORTHO05D002434 2.4e-09 65.9 87 41.4
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 2.4e-09 65.9 80 43.8
Atru.chr2.3399 Acer truncatum HOM05D003074 ORTHO05D002434 3.1e-09 65.5 67 50.7
Atru.chr2.3400 Acer truncatum HOM05D003074 ORTHO05D002434 3.1e-09 65.5 61 54.1
AUR62015773 Chenopodium quinoa HOM05D003074 ORTHO05D002434 3.1e-09 65.5 82 42.7
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 3.1e-09 65.5 89 41.6
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 3.1e-09 65.5 116 39.7
Solyc12g005000.1 Solanum lycopersicum HOM05D003074 ORTHO05D002434 3.1e-09 65.5 91 54.9
Glyma.08G316000 Glycine max HOM05D003074 ORTHO05D002434 4.1e-09 65.1 98 44.9
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 4.1e-09 65.1 114 41.2
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 5.3e-09 64.7 85 38.8
Lj6g0015217 Lotus japonicus HOM05D003074 ORTHO05D002434 5.3e-09 64.7 93 41.9
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 6.9e-09 64.3 116 39.7
Cc09_g09730 Coffea canephora HOM05D003074 ORTHO05D002434 6.9e-09 64.3 63 54.0
Lsat_1_v5_gn_5_6000 Lactuca sativa HOM05D003074 ORTHO05D002434 6.9e-09 64.3 55 56.4
TAR624G0488 Trochodendron aralioides HOM05D003074 ORTHO05D002434 6.9e-09 64.3 67 52.2
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 9.1e-09 63.9 105 41.0
TAR627G0593 Trochodendron aralioides HOM05D003074 ORTHO05D002434 9.1e-09 63.9 81 45.7
ClCG05G014310 Citrullus lanatus HOM05D003074 ORTHO05D002434 1.2e-08 63.5 51 62.7
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 1.5e-08 63.2 106 35.8
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 1.5e-08 63.2 117 36.8
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 1.5e-08 63.2 74 47.3
CDE05G1751 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 2.6e-08 62.4 67 38.8
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 3.4e-08 62.0 62 45.2
Sc03g0008600 Simmondsia chinensis HOM05D003074 ORTHO05D002434 3.4e-08 62.0 105 38.1
Gohir.D01G066350 Gossypium hirsutum HOM05D003074 ORTHO05D002434 4.5e-08 61.6 74 43.2
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 4.5e-08 61.6 116 37.1
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 5.9e-08 61.2 101 34.7
LjContig00272g0022666 Lotus japonicus HOM05D003074 ORTHO05D002434 5.9e-08 61.2 94 40.4
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 5.9e-08 61.2 134 37.3
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 7.7e-08 60.8 69 46.4
CDE05G3459 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 7.7e-08 60.8 106 31.1
AUR62020442 Chenopodium quinoa HOM05D003074 ORTHO05D002434 7.7e-08 60.8 103 44.7
Cc05_g13710 Coffea canephora HOM05D003074 ORTHO05D002434 7.7e-08 60.8 70 52.9
MBI18_g22612_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 7.7e-08 60.8 103 35.0
MBI02_g07158_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 1.3e-07 60.1 68 45.6
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.7e-07 59.7 78 38.5
AUR62015772 Chenopodium quinoa HOM05D003074 ORTHO05D002434 1.7e-07 59.7 102 43.1
Gohir.A01G079300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.7e-07 59.7 106 34.0
CDE02G3016 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 2.2e-07 59.3 98 35.7
Dinv13888 Davidia involucrata HOM05D003074 ORTHO05D002434 2.2e-07 59.3 78 43.6
Lalb_Chr15g0081141 Lupinus albus HOM05D003074 ORTHO05D002434 2.2e-07 59.3 50 56.0
Glyma.02G290900 Glycine max HOM05D003074 ORTHO05D002434 2.9e-07 58.9 93 43.0
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 3.8e-07 58.5 69 43.5
Potri.011G139400 Populus trichocarpa HOM05D003074 ORTHO05D002434 3.8e-07 58.5 52 55.8
EL10Ac4g07811 Beta vulgaris HOM05D003074 ORTHO05D002434 5.0e-07 58.2 104 36.5
Oeu063916.1 Olea europaea HOM05D003074 ORTHO05D002434 8.5e-07 57.4 98 39.8
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 8.5e-07 57.4 117 36.8
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 1.1e-06 57.0 104 38.5
PGR004G0474 Punica granatum HOM05D003074 ORTHO05D002434 1.1e-06 57.0 118 37.3
MBI02_g40709_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 1.4e-06 56.6 117 35.9
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 1.4e-06 56.6 56 48.2
Rhsim13G0146000 Rhododendron simsii HOM05D002761 ORTHO05D003351 1.9e-06 56.2 64 53.1
RhsimUnG0109700 Rhododendron simsii HOM05D003074 ORTHO05D002434 1.9e-06 56.2 64 53.1
ECA246G0494 Erigeron canadensis HOM05D003074 ORTHO05D002434 3.2e-06 55.5 104 34.6
Sopen12g001010 Solanum pennellii HOM05D003074 ORTHO05D002434 3.2e-06 55.5 80 51.2
Duzib192G0001 Durio zibethinus HOM05D003074 ORTHO05D002434 4.2e-06 55.1 103 34.0
MELO3C025367.2 Cucumis melo HOM05D003074 ORTHO05D002434 5.5e-06 54.7 97 37.1
CsaV3_3G005050 Cucumis sativus L. HOM05D003074 ORTHO05D002434 5.5e-06 54.7 58 46.6
DCAR_004216 Daucus carota HOM05D003074 ORTHO05D002434 5.5e-06 54.7 108 37.0
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 5.5e-06 54.7 111 36.0
Sabra11G0125400 Salix brachista HOM05D003074 ORTHO05D002434 5.5e-06 54.7 53 52.8
Lalb_Chr04g0248431 Lupinus albus HOM05D003074 ORTHO05D002434 7.2e-06 54.3 89 40.4
PGSC0003DMG400019879 Solanum tuberosum HOM05D003074 ORTHO05D002434 9.4e-06 53.9 97 35.1
TPR.G34803 Trifolium pratense HOM05D003074 ORTHO05D002434 9.4e-06 53.9 45 57.8


User provided reference genes

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