Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009973g0030 Nicotiana tabacum HOM05D006839 ORTHO05D007872 7.0e-62 240.4 114 100.0
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.7e-50 201.1 100 92.0
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.7e-42 174.5 112 75.0
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.7e-39 166.0 100 76.0
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 5.2e-33 144.4 114 62.3
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 1.2e-32 143.3 112 58.9
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 5.8e-32 141.0 114 60.5
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 2.2e-31 139.0 111 59.5
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 7.1e-30 134.0 115 61.7
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 7.1e-30 134.0 114 58.8
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 4.6e-29 131.3 100 59.0
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 1.0e-28 130.2 100 60.0
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 5.6e-27 124.4 114 55.3
Nitab4.5_0000771g0190 Nicotiana tabacum HOM05D006839 ORTHO05D007872 3.4e-24 115.2 86 57.0
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 5.8e-24 114.4 88 59.1
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.9e-23 112.1 113 50.4
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 1.5e-16 89.7 110 46.4
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 2.0e-16 89.4 84 52.4
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 2.6e-16 89.0 109 45.9
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 4.5e-16 88.2 82 51.2
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 4.5e-16 88.2 110 45.5
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 4.5e-16 88.2 82 51.2
Nitab4.5_0000771g0200 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.5e-16 88.2 61 65.6
Actinidia24884 Actinidia chinensis HOM05D006839 ORTHO05D007872 5.8e-16 87.8 82 51.2
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 5.8e-16 87.8 82 51.2
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 9.9e-16 87.0 82 52.4
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 9.9e-16 87.0 82 50.0
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 1.3e-15 86.7 110 44.5
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 1.3e-15 86.7 82 51.2
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 1.3e-15 86.7 82 51.2
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 1.7e-15 86.3 112 41.1
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.2e-15 85.9 82 50.0
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.2e-15 85.9 82 50.0
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 2.2e-15 85.9 82 48.8
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 2.9e-15 85.5 82 52.4
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 2.9e-15 85.5 82 51.2
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.9e-15 85.5 82 48.8
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 3.8e-15 85.1 107 45.8
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 3.8e-15 85.1 83 53.0
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 4.9e-15 84.7 83 51.8
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 4.9e-15 84.7 83 51.8
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 4.9e-15 84.7 82 51.2
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 4.9e-15 84.7 106 46.2
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 6.4e-15 84.3 83 51.8
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 6.4e-15 84.3 88 51.1
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 6.4e-15 84.3 82 52.4
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 8.4e-15 84.0 83 51.8
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 8.4e-15 84.0 83 50.6
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 8.4e-15 84.0 110 40.9
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 8.4e-15 84.0 82 50.0
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 1.1e-14 83.6 77 51.9
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 1.1e-14 83.6 82 48.8
QL12p022082 Quercus lobata HOM05D006839 ORTHO05D007872 1.1e-14 83.6 82 48.8
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 1.9e-14 82.8 82 48.8
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 1.9e-14 82.8 77 54.5
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.9e-14 82.8 86 51.2
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.4e-14 82.4 82 50.0
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 4.2e-14 81.6 82 48.8
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 5.4e-14 81.3 82 50.0
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 5.4e-14 81.3 82 50.0
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 7.1e-14 80.9 114 39.5
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 1.2e-13 80.1 83 48.2
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 1.6e-13 79.7 82 47.6
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 1.6e-13 79.7 108 45.4
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 2.1e-13 79.3 83 48.2
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 2.1e-13 79.3 82 45.1
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 2.1e-13 79.3 83 51.8
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 4.6e-13 78.2 109 43.1
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 6.0e-13 77.8 110 40.9
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 7.9e-13 77.4 77 51.9
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 1.3e-12 76.6 82 47.6
Nitab4.5_0006691g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.3e-12 76.6 77 54.5
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 2.3e-12 75.9 83 44.6
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 2.3e-12 75.9 83 44.6
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 5.1e-12 74.7 82 45.1
Peaxi162Scf00681g00011 Petunia axillaris HOM05D006839 ORTHO05D007872 6.7e-12 74.3 114 39.5
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 6.7e-12 74.3 81 42.0
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.1e-11 73.6 81 40.7
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 2.5e-11 72.4 82 42.7
SalBow6G0334 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.3e-11 72.0 82 37.8
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 4.3e-11 71.6 84 45.2
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 7.4e-11 70.9 86 43.0
Eucgr.J01400 Eucalyptus grandis HOM05D006839 ORTHO05D007872 9.6e-11 70.5 82 39.0
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 1.6e-10 69.7 82 42.7
SalBow6G5378 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.1e-10 69.3 82 37.8
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 8.1e-10 67.4 82 43.9
PGR119G1259 Punica granatum HOM05D006839 ORTHO05D007872 2.4e-09 65.9 102 32.4
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 5.3e-09 64.7 82 35.4
Actinidia21107 Actinidia chinensis HOM05D000265 ORTHO05D000161 2.0e-08 62.8 50 62.0
Eucgr.L00883 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.6e-08 62.4 62 50.0
HPP92_001336 Vanilla planifolia HOM05D006839 ORTHO05D007872 2.6e-08 62.4 69 47.8
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 9.9e-08 60.5 77 39.0
Glyma.03G152600 Glycine max HOM05D006839 ORTHO05D007872 1.7e-07 59.7 55 52.7
Nitab4.5_0000003g0350 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.9e-07 58.2 81 39.5


User provided reference genes

Program Settings