Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009972g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 0.0e+00 1080.1 551 100.0
Nitab4.5_0000308g0260 Nicotiana tabacum HOM05D007001 ORTHO05D005587 6.8e-280 966.8 551 90.6
Peaxi162Scf00016g00623 Petunia axillaris HOM05D007001 ORTHO05D005587 2.4e-200 702.6 671 62.4
PGSC0003DMG400000714 Solanum tuberosum HOM05D007001 ORTHO05D005587 1.6e-196 689.9 646 62.7
Solyc01g109780.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 7.0e-192 674.5 646 61.0
Sopen01g051970 Solanum pennellii HOM05D007001 ORTHO05D005587 1.1e-189 667.2 646 60.4
Oeu055597.1 Olea europaea HOM05D007001 ORTHO05D005587 8.9e-86 322.0 667 36.1
Nitab4.5_0008874g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 2.0e-82 310.8 370 49.2
Oeu029153.2 Olea europaea HOM05D007001 ORTHO05D005587 6.1e-79 299.3 665 34.4
Cc02_g17350 Coffea canephora HOM05D007001 ORTHO05D005587 1.2e-74 285.0 679 33.9
Peaxi162Scf00003g01121 Petunia axillaris HOM05D007001 ORTHO05D005587 1.9e-72 277.7 359 47.9
Atru.chr5.3047 Acer truncatum HOM05D007001 ORTHO05D005587 4.3e-72 276.6 712 34.4
GSVIVG01023803001 Vitis vinifera HOM05D007001 ORTHO05D005587 2.9e-68 263.8 383 44.6
Manes.04G089500 Manihot esculenta HOM05D007001 ORTHO05D005587 1.7e-65 254.6 413 42.4
QL11p044451 Quercus lobata HOM05D007001 ORTHO05D005587 3.0e-65 253.8 402 44.0
vmacro02090 Vaccinium macrocarpon HOM05D007001 ORTHO05D005587 7.3e-64 249.2 665 32.0
Manes.11G085600 Manihot esculenta HOM05D007001 ORTHO05D005587 9.5e-64 248.8 388 41.5
CSS0022058 Camellia sinensis var. sinensis HOM05D007001 ORTHO05D005587 1.2e-63 248.4 710 33.0
Rhsim11G0179000 Rhododendron simsii HOM05D007001 ORTHO05D005587 6.2e-63 246.1 664 31.9
Actinidia00536 Actinidia chinensis HOM05D007001 ORTHO05D005587 1.4e-62 245.0 746 30.8
Haze_02407 Corylus avellana HOM05D007001 ORTHO05D005587 8.9e-62 242.3 388 44.8
Cfa004981 Carpinus fangiana HOM05D007001 ORTHO05D005587 1.2e-61 241.9 385 44.9
COL.COLO4_25959 Corchorus olitorius HOM05D007001 ORTHO05D005587 2.9e-60 237.3 388 39.4
Gohir.D12G029100 Gossypium hirsutum HOM05D007001 ORTHO05D005587 2.9e-60 237.3 392 42.1
Nitab4.5_0007728g0020 Nicotiana tabacum HOM05D007001 ORTHO05D005587 2.9e-60 237.3 229 57.2
Gorai.008G029800 Gossypium raimondii HOM05D007001 ORTHO05D005587 1.9e-59 234.6 392 41.8
CiPaw.05G066600 Carya illinoinensis HOM05D007001 ORTHO05D005587 1.6e-58 231.5 388 42.0
Nn5g29665 Nelumbo nucifera HOM05D007001 ORTHO05D005587 1.0e-57 228.8 436 38.3
Migut.N01249 Erythranthe guttata HOM05D007001 ORTHO05D005587 1.3e-57 228.4 560 33.9
Ciclev10027908m.g Citrus clementina HOM05D007001 ORTHO05D005587 8.6e-57 225.7 412 39.8
Actinidia36006 Actinidia chinensis HOM05D007001 ORTHO05D005587 3.6e-55 220.3 711 30.1
CiPaw.06G134300 Carya illinoinensis HOM05D007001 ORTHO05D005587 1.1e-54 218.8 406 41.1
Thecc.02G082800 Theobroma cacao HOM05D007001 ORTHO05D005587 3.1e-54 217.2 392 38.8
Duzib052G0704 Durio zibethinus HOM05D007001 ORTHO05D005587 1.5e-53 214.9 409 36.4
Duzib132G0641 Durio zibethinus HOM05D007001 ORTHO05D005587 2.0e-53 214.5 388 39.2
TAR376G0762 Trochodendron aralioides HOM05D007001 ORTHO05D005587 3.4e-53 213.8 378 39.7
Potri.004G157000 Populus trichocarpa HOM05D007001 ORTHO05D005587 9.2e-51 205.7 405 39.5
Potri.009G118651 Populus trichocarpa HOM05D007001 ORTHO05D005587 7.8e-50 202.6 516 34.3
TWI79G0124 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 7.8e-50 202.6 388 40.7
Sabra09G0090900 Salix brachista HOM05D007001 ORTHO05D005587 2.5e-48 197.6 462 35.1
Sabra04G0104900 Salix brachista HOM05D007001 ORTHO05D005587 5.6e-48 196.4 724 29.8
Eucgr.G01689 Eucalyptus grandis HOM05D007001 ORTHO05D005587 3.6e-47 193.7 389 37.0
PGSC0003DMG400007729 Solanum tuberosum HOM05D007001 ORTHO05D005587 1.4e-46 191.8 231 50.2
TWI31G1402 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 4.0e-46 190.3 389 37.3
SalBow3G2815 Salvia bowleyana HOM05D007001 ORTHO05D005587 2.9e-44 184.1 674 29.5
MD10G1072800 Malus domestica HOM05D007001 ORTHO05D005587 6.4e-44 183.0 542 32.1
MBI10_g06730_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 1.1e-43 182.2 393 36.6
AUR62011300 Chenopodium quinoa HOM05D007001 ORTHO05D005587 1.4e-43 181.8 393 35.1
ECA240G0129 Erigeron canadensis HOM05D007001 ORTHO05D005587 2.4e-43 181.0 400 34.2
FAN27G0151 Fragaria x ananassa HOM05D007001 ORTHO05D005587 5.4e-43 179.9 392 38.0
FvH4_2g09190 Fragaria vesca HOM05D007001 ORTHO05D005587 7.1e-43 179.5 392 37.2
Prupe.8G094200 Prunus persica HOM05D007001 ORTHO05D005587 9.3e-43 179.1 505 32.1
Lj3g0024948 Lotus japonicus HOM05D007001 ORTHO05D005587 3.5e-42 177.2 392 36.7
RcHm_v2.0_Chr6g0265031 Rosa chinensis HOM05D007001 ORTHO05D005587 6.0e-42 176.4 703 29.3
FAN24G0234 Fragaria x ananassa HOM05D007001 ORTHO05D005587 1.3e-41 175.3 392 37.2
AUR62016758 Chenopodium quinoa HOM05D007001 ORTHO05D005587 1.7e-41 174.9 392 34.7
FAN15G3137 Fragaria x ananassa HOM05D007001 ORTHO05D005587 5.1e-41 173.3 388 37.6
Migut.B00223 Erythranthe guttata HOM05D007001 ORTHO05D005587 8.7e-41 172.6 626 30.4
PGR042G0047 Punica granatum HOM05D007001 ORTHO05D005587 8.7e-41 172.6 389 39.3
Glyma.11G116700 Glycine max HOM05D007001 ORTHO05D005587 1.1e-40 172.2 388 37.4
Sopen10g023370 Solanum pennellii HOM05D007001 ORTHO05D005587 1.5e-40 171.8 229 48.9
Glyma.12G042500 Glycine max HOM05D007001 ORTHO05D005587 3.3e-40 170.6 388 37.1
Ca_20889_v3 Cicer arietinum L. HOM05D007001 ORTHO05D005587 4.3e-40 170.2 385 37.7
EL10Ac9g21706 Beta vulgaris HOM05D007001 ORTHO05D005587 7.3e-40 169.5 448 31.9
Cpa.g.sc17.13 Carica papaya HOM05D007001 ORTHO05D005587 4.8e-39 166.8 401 35.4
Ah.01g019240 Amaranthus hybridus HOM05D007001 ORTHO05D005587 1.4e-38 165.2 450 30.9
VMungo1127G1486 Vigna mungo HOM05D007001 ORTHO05D005587 6.9e-38 162.9 391 34.8
Hund06244 Selenicereus undatus HOM05D007001 ORTHO05D005587 9.0e-38 162.5 423 33.1
Phvul.011G044100 Phaseolus vulgaris HOM05D007001 ORTHO05D005587 2.2e-36 157.9 385 36.6
HanXRQChr03g0074191 Helianthus annuus HOM05D007001 ORTHO05D005587 6.4e-36 156.4 613 29.0
Lalb_Chr19g0138701 Lupinus albus HOM05D007001 ORTHO05D005587 2.1e-34 151.4 379 36.1
MBI16_g08804_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 2.1e-34 151.4 374 31.8
MD05G1064100 Malus domestica HOM05D007001 ORTHO05D005587 4.6e-34 150.2 691 27.6
CsaV3_2G014890 Cucumis sativus L. HOM05D007001 ORTHO05D005587 6.0e-34 149.8 483 31.7
TPR.G22545 Trifolium pratense HOM05D007001 ORTHO05D005587 3.0e-33 147.5 450 30.7
Psat7g184200 Pisum sativum HOM05D007001 ORTHO05D005587 3.3e-32 144.1 386 32.9
arahy.Tifrunner.gnm1.ann1.I3TCZM Arachis hypogaea HOM05D007001 ORTHO05D005587 4.3e-32 143.7 431 32.7
Lalb_Chr03g0025591 Lupinus albus HOM05D007001 ORTHO05D005587 1.3e-31 142.1 385 34.3
arahy.Tifrunner.gnm1.ann1.M1RWF9 Arachis hypogaea HOM05D007001 ORTHO05D005587 8.1e-31 139.4 356 36.0
Dinv23502 Davidia involucrata HOM05D007001 ORTHO05D005587 8.1e-31 139.4 511 28.8
Aqoxy5G01586 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 6.9e-30 136.3 393 32.8
Sed0007775 Sechium edule HOM05D007001 ORTHO05D005587 2.0e-29 134.8 393 33.6
ClCG11G004280 Citrullus lanatus HOM05D007001 ORTHO05D005587 9.9e-29 132.5 467 31.3
SalBow6G2324 Salvia bowleyana HOM05D007001 ORTHO05D005587 9.9e-29 132.5 388 32.2
MELO3C023308.2 Cucumis melo HOM05D007001 ORTHO05D005587 2.2e-28 131.3 478 29.9
DCAR_001566 Daucus carota HOM05D007001 ORTHO05D005587 8.4e-28 129.4 411 31.6
Medtr4g070420 Medicago truncatula HOM05D007001 ORTHO05D005587 1.1e-27 129.0 442 31.7
Lsat_1_v5_gn_9_108461 Lactuca sativa HOM05D007001 ORTHO05D005587 3.9e-25 120.6 637 27.6
PSO170G6310 Papaver somniferum HOM05D007001 ORTHO05D005587 4.3e-24 117.1 451 28.4
Oeu020745.1 Olea europaea HOM05D000342 ORTHO05D000217 5.6e-24 116.7 199 41.2
DCAR_028976 Daucus carota HOM05D007001 ORTHO05D005587 9.6e-24 115.9 505 26.7
PSO764G0276 Papaver somniferum HOM05D007001 ORTHO05D005587 1.8e-22 111.7 451 27.5
SGA_v2.0_scaffold125G33736 Striga asiatica HOM05D007001 ORTHO05D005587 9.0e-22 109.4 328 33.2
PSO675G1875 Papaver somniferum HOM05D007001 ORTHO05D005587 2.6e-21 107.8 386 30.1
THA.LOC104804555 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 1.0e-20 105.9 572 26.4
THA.LOC104807308 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 5.5e-19 100.1 562 24.0
BcaB03g16349 Brassica carinata HOM05D008776 ORTHO05D005587 4.6e-18 97.1 387 27.6
Gohir.A12G029800 Gossypium hirsutum HOM05D007001 ORTHO05D005587 4.6e-18 97.1 133 43.6
Sc08g0000600 Simmondsia chinensis HOM05D007001 ORTHO05D005587 6.0e-18 96.7 516 28.7
Nn1g04928 Nelumbo nucifera HOM05D007001 ORTHO05D005587 3.9e-17 94.0 200 36.5
Thhalv10022682m.g Eutrema salsugineum HOM05D008776 ORTHO05D005587 6.7e-17 93.2 293 31.4
BcaC06g36144 Brassica carinata HOM05D008776 ORTHO05D005587 1.5e-16 92.0 433 27.5
BolC7t41148H Brassica oleracea HOM05D008776 ORTHO05D005587 1.5e-16 92.0 433 27.5
Aqoxy6G01158 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 5.7e-16 90.1 406 26.4
Sp3g29580 Schrenkiella parvula HOM05D008776 ORTHO05D005587 5.7e-16 90.1 390 26.7
AL3G52490 Arabidopsis lyrata HOM05D008776 ORTHO05D005587 1.3e-15 89.0 389 28.5
Lalb_Chr01g0002461 Lupinus albus HOM05D007001 ORTHO05D005587 1.6e-15 88.6 241 34.0
Solyc10g052650.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 3.7e-15 87.4 89 55.1
C07p07280 Brassica napus HOM05D008776 ORTHO05D005587 4.8e-15 87.0 432 27.1
Carub.0003s3009 Capsella rubella HOM05D008776 ORTHO05D005587 1.1e-14 85.9 383 27.4
A07p04560 Brassica napus HOM05D008776 ORTHO05D005587 4.1e-14 84.0 419 27.0
BraA07t28245Z Brassica rapa HOM05D008776 ORTHO05D005587 4.1e-14 84.0 419 27.0
AT2G16365 Arabidopsis thaliana HOM05D008776 ORTHO05D005587 1.5e-13 82.0 389 27.5
Nitab4.5_0007728g0030 Nicotiana tabacum HOM05D007001 ORTHO05D005587 7.7e-13 79.7 94 43.6
Aa31LG8G13740 Aethionema arabicum HOM05D008776 ORTHO05D005587 6.5e-12 76.6 297 30.0
BcaB08g34642 Brassica carinata HOM05D008776 ORTHO05D005587 4.2e-11 73.9 400 26.2
CDE06G0685 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 7.2e-11 73.2 237 29.1
BraA03t13706Z Brassica rapa HOM05D008776 ORTHO05D005587 1.2e-10 72.4 311 27.0
A03p45740 Brassica napus HOM05D008776 ORTHO05D005587 1.8e-09 68.6 416 25.7
unitig_699.g19881 Utricularia gibba HOM05D007001 ORTHO05D005587 2.3e-09 68.2 374 28.1
BcaC01g03031 Brassica carinata HOM05D008776 ORTHO05D005587 3.0e-09 67.8 427 24.8
C03p56950 Brassica napus HOM05D008776 ORTHO05D005587 3.0e-09 67.8 427 24.8
BolC3t17973H Brassica oleracea HOM05D008776 ORTHO05D005587 3.0e-09 67.8 427 24.8
CDE05G0774 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 2.0e-08 65.1 150 33.3
CDE04G2987 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 1.4e-06 58.9 194 28.9


User provided reference genes

Program Settings