Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.0e-56 223.0 101 100.0
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 5.1e-56 220.7 101 99.0
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 1.5e-55 219.2 101 97.0
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.3e-55 218.0 101 99.0
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 7.4e-55 216.9 101 95.0
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 1.6e-54 215.7 101 93.1
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 4.8e-54 214.2 101 93.1
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 1.8e-53 212.2 99 94.9
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.1e-47 193.0 89 97.8
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 4.3e-47 191.0 97 83.5
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 4.3e-47 191.0 97 83.5
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 1.3e-46 189.5 93 87.1
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 1.3e-46 189.5 93 88.2
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 3.7e-46 188.0 94 84.0
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 1.1e-45 186.4 94 84.0
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.1e-45 186.4 97 78.4
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.1e-45 186.4 97 78.4
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 2.4e-45 185.3 93 86.0
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 2.4e-45 185.3 93 83.9
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 2.4e-45 185.3 99 78.8
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 4.0e-45 184.5 93 83.9
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 4.0e-45 184.5 93 86.0
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 5.3e-45 184.1 99 82.8
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 6.9e-45 183.7 94 84.0
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 9.0e-45 183.3 93 82.8
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 1.2e-44 183.0 94 84.0
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 1.5e-44 182.6 93 84.9
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 1.5e-44 182.6 93 81.7
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 1.5e-44 182.6 94 83.0
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 1.5e-44 182.6 94 83.0
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 2.0e-44 182.2 93 81.7
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 2.0e-44 182.2 94 83.0
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 2.0e-44 182.2 94 81.9
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 2.0e-44 182.2 97 79.4
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 2.6e-44 181.8 94 81.9
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 3.4e-44 181.4 93 81.7
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 3.4e-44 181.4 93 84.9
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 3.4e-44 181.4 94 80.9
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 5.8e-44 180.6 93 82.8
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 5.8e-44 180.6 93 82.8
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 5.8e-44 180.6 93 82.8
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 7.6e-44 180.3 95 81.1
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 1.0e-43 179.9 97 78.4
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 1.0e-43 179.9 94 80.9
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 1.0e-43 179.9 92 80.4
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 1.0e-43 179.9 92 80.4
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 1.0e-43 179.9 92 80.4
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.3e-43 179.5 95 80.0
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 1.7e-43 179.1 97 78.4
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 1.7e-43 179.1 93 81.7
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.7e-43 179.1 91 84.6
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 2.2e-43 178.7 93 77.4
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 2.2e-43 178.7 93 81.7
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 3.8e-43 177.9 94 81.9
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 3.8e-43 177.9 93 83.9
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 3.8e-43 177.9 92 82.6
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 3.8e-43 177.9 93 82.8
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 4.9e-43 177.6 93 81.7
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 4.9e-43 177.6 93 81.7
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 4.9e-43 177.6 94 80.9
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 4.9e-43 177.6 96 76.0
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 8.4e-43 176.8 94 77.7
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 8.4e-43 176.8 95 80.0
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 8.4e-43 176.8 93 80.6
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 1.1e-42 176.4 94 77.7
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 1.1e-42 176.4 93 81.7
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 1.1e-42 176.4 94 80.9
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 1.1e-42 176.4 93 79.6
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.9e-42 175.6 94 78.7
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.9e-42 175.6 94 78.7
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 1.9e-42 175.6 94 77.7
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 1.9e-42 175.6 92 81.5
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 2.5e-42 175.3 94 78.7
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 3.2e-42 174.9 93 80.6
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 4.2e-42 174.5 91 78.0
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 5.5e-42 174.1 92 79.3
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 7.1e-42 173.7 97 75.3
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 9.3e-42 173.3 93 78.5
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.2e-41 172.9 110 72.7
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 1.6e-41 172.6 91 81.3
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 2.7e-41 171.8 89 80.9
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 2.7e-41 171.8 113 68.1
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 4.6e-41 171.0 91 80.2
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 4.6e-41 171.0 91 80.2
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 4.6e-41 171.0 94 77.7
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 6.0e-41 170.6 115 68.7
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.0e-40 169.9 95 77.9
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 1.0e-40 169.9 93 79.6
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 1.3e-40 169.5 94 75.5
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 1.3e-40 169.5 93 77.4
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 2.3e-40 168.7 97 73.2
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 3.0e-40 168.3 89 79.8
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 3.0e-40 168.3 93 74.2
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 3.9e-40 167.9 93 77.4
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 3.9e-40 167.9 97 75.3
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 1.1e-39 166.4 94 74.5
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 2.5e-39 165.2 91 76.9
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 3.3e-39 164.9 96 75.0
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 4.3e-39 164.5 94 73.4
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 4.3e-39 164.5 94 73.4
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 5.7e-39 164.1 94 75.5
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 5.7e-39 164.1 94 71.3
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 5.7e-39 164.1 94 71.3
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 9.6e-39 163.3 91 79.1
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 6.3e-38 160.6 75 96.0
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 1.4e-37 159.5 89 76.4
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 9.0e-37 156.8 91 70.3
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 5.9e-36 154.1 91 71.4
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 5.9e-36 154.1 91 71.4
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 7.6e-36 153.7 87 73.6
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 7.6e-36 153.7 87 73.6
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 7.6e-36 153.7 87 73.6
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 7.6e-36 153.7 91 71.4
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 1.3e-35 152.9 94 69.1
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 1.3e-35 152.9 87 72.4
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 1.3e-35 152.9 87 72.4
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 1.3e-35 152.9 87 72.4
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 1.3e-35 152.9 87 72.4
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 1.3e-35 152.9 87 72.4
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 1.7e-35 152.5 78 78.2
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 2.2e-35 152.1 87 73.6
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 2.9e-35 151.8 94 70.2
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 3.8e-35 151.4 93 68.8
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.4e-34 149.4 87 72.4
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.2e-34 148.3 80 82.5
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.2e-34 148.3 78 84.6
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 2.2e-30 135.6 93 62.4
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 1.5e-28 129.4 74 71.6
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 1.4e-26 122.9 209 35.4
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 1.2e-25 119.8 64 73.4
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 1.8e-24 115.9 61 82.0
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 8.8e-24 113.6 61 82.0
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 1.3e-22 109.8 70 68.6
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.2e-22 109.0 74 66.2
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 5.1e-16 87.8 70 51.4
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 8.8e-16 87.0 75 49.3
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 1.8e-13 79.3 61 60.7
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 1.0e-08 63.5 36 61.1
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 8.8e-08 60.5 57 42.1


User provided reference genes

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