Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009911g0030 Nicotiana tabacum HOM05D012132 ORTHO05D017756 2.6e-45 184.9 86 100.0
Nitab4.5_0000938g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000283 4.7e-10 67.8 76 44.7
Nitab4.5_0007283g0040 Nicotiana tabacum HOM05D012132 ORTHO05D017756 1.0e-09 66.6 58 48.3
Nitab4.5_0000479g0040 Nicotiana tabacum HOM05D012132 ORTHO05D017756 1.8e-09 65.9 61 47.5
PGSC0003DMG400031219 Solanum tuberosum HOM05D000003 ORTHO05D000283 6.8e-09 63.9 105 32.4
Nitab4.5_0008263g0010 Nicotiana tabacum HOM05D012132 ORTHO05D017756 8.9e-09 63.5 58 46.6
Sopen11g011920 Solanum pennellii HOM05D000003 ORTHO05D000004 8.9e-09 63.5 106 30.2
PGSC0003DMG400005322 Solanum tuberosum HOM05D000003 ORTHO05D000283 2.0e-08 62.4 105 31.4
Nitab4.5_0001248g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000283 3.4e-08 61.6 94 34.0
Sopen00g006450 Solanum pennellii HOM05D000003 ORTHO05D000004 4.4e-08 61.2 94 33.0
Sopen00g006610 Solanum pennellii HOM05D000003 ORTHO05D000004 7.5e-08 60.5 100 32.0
Sopen00g013500 Solanum pennellii HOM05D000003 ORTHO05D000004 7.5e-08 60.5 99 29.3
Sopen00g004700 Solanum pennellii HOM05D000003 ORTHO05D000004 9.8e-08 60.1 100 33.0
Sopen12g026800 Solanum pennellii HOM05D000003 ORTHO05D000004 9.8e-08 60.1 100 28.0
PGSC0003DMG400044008 Solanum tuberosum HOM05D000003 ORTHO05D000283 9.8e-08 60.1 62 43.5
Sopen00g005620 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-07 59.7 100 30.0
PGSC0003DMG400029210 Solanum tuberosum HOM05D000003 ORTHO05D000283 1.3e-07 59.7 104 29.8
Sopen02g008520 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-07 59.3 100 30.0
Sopen00g008600 Solanum pennellii HOM05D000003 ORTHO05D000004 2.4e-06 55.5 99 29.3
Sopen00g014270 Solanum pennellii HOM05D000003 ORTHO05D000004 5.4e-06 54.3 99 27.3
Sopen03g014510 Solanum pennellii HOM05D000014 ORTHO05D000016 7.0e-06 53.9 99 28.3
Rhsim12G0092100 Rhododendron simsii HOM05D012132 ORTHO05D017756 9.2e-06 53.5 60 36.7
Sopen07g017840 Solanum pennellii HOM05D000003 ORTHO05D000004 9.2e-06 53.5 94 27.7


User provided reference genes

Program Settings