Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.5e-77 292.7 146 100.0
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 6.2e-71 270.8 167 83.8
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 7.6e-69 263.8 167 82.0
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 6.4e-68 260.8 167 80.8
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 2.2e-60 235.7 154 78.6
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 4.9e-60 234.6 167 75.4
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 9.3e-59 230.3 152 77.0
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.2e-58 229.9 167 74.3
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 1.6e-58 229.6 167 74.3
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 3.5e-58 228.4 168 71.4
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 2.7e-50 202.2 165 64.2
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 5.1e-49 198.0 165 63.0
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 6.7e-49 197.6 167 62.3
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 1.1e-48 196.8 153 66.7
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 2.5e-48 195.7 165 62.4
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 3.3e-48 195.3 154 66.2
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 3.3e-48 195.3 154 66.2
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 3.3e-48 195.3 165 62.4
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 5.6e-48 194.5 154 66.9
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 5.6e-48 194.5 158 64.6
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 9.6e-48 193.7 152 66.4
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 1.3e-47 193.4 155 63.9
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 1.6e-47 193.0 154 64.9
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 1.6e-47 193.0 167 63.5
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 2.8e-47 192.2 152 65.8
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 2.8e-47 192.2 153 66.7
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 6.2e-47 191.0 162 62.3
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 1.1e-46 190.3 164 58.5
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 1.4e-46 189.9 169 59.8
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 4.0e-46 188.3 169 59.8
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 5.3e-46 188.0 153 61.4
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 1.2e-45 186.8 152 64.5
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 2.0e-45 186.0 153 62.1
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 2.6e-45 185.7 159 59.7
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 2.6e-45 185.7 205 52.7
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 2.6e-45 185.7 154 61.0
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 2.6e-45 185.7 154 61.0
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 3.4e-45 185.3 152 61.8
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 3.4e-45 185.3 161 58.4
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.5e-45 184.9 152 61.8
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 5.8e-45 184.5 157 61.8
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 5.8e-45 184.5 157 61.8
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 1.0e-44 183.7 152 60.5
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 1.0e-44 183.7 152 61.2
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 1.3e-44 183.3 152 61.8
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 1.3e-44 183.3 153 60.8
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 1.7e-44 183.0 152 62.5
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 2.2e-44 182.6 153 61.4
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 3.8e-44 181.8 152 63.8
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 4.9e-44 181.4 164 56.7
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 1.4e-43 179.9 159 56.0
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 1.4e-43 179.9 152 61.2
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 1.9e-43 179.5 154 59.7
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 1.9e-43 179.5 159 57.9
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 5.5e-43 177.9 158 58.9
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 7.1e-43 177.6 162 54.9
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 7.1e-43 177.6 159 55.3
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 1.6e-42 176.4 152 59.2
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 3.5e-42 175.3 158 55.7
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 3.5e-42 175.3 152 58.6
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 4.6e-42 174.9 161 57.1
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 4.6e-42 174.9 159 54.7
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 4.6e-42 174.9 158 57.6
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 4.6e-42 174.9 152 58.6
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 6.0e-42 174.5 159 56.0
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 6.0e-42 174.5 152 62.5
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 1.0e-41 173.7 164 57.3
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 3.0e-41 172.2 187 50.8
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 3.0e-41 172.2 152 61.8
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 3.9e-41 171.8 152 59.2
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 1.1e-40 170.2 157 56.7
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 1.5e-40 169.9 151 56.3
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 1.9e-40 169.5 154 58.4
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 3.3e-40 168.7 154 59.1
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 4.3e-40 168.3 157 55.4
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 5.7e-40 167.9 157 56.1
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 5.7e-40 167.9 157 55.4
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 5.7e-40 167.9 148 59.5
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 7.4e-40 167.5 221 47.1
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 9.7e-40 167.2 157 56.1
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 1.6e-39 166.4 157 54.8
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 6.3e-39 164.5 151 57.0
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 6.3e-39 164.5 157 55.4
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 9.0e-38 160.6 154 55.8
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 2.0e-37 159.5 157 52.2
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 6.5e-36 154.5 170 50.6
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 1.4e-35 153.3 133 62.4
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 1.2e-34 150.2 154 53.9
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 2.7e-34 149.1 150 52.0
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 5.1e-33 144.8 149 55.7
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 1.3e-31 140.2 118 59.3
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 1.4e-30 136.7 114 58.8
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 3.1e-30 135.6 113 58.4
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 7.7e-29 131.0 90 73.3
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 5.5e-27 124.8 117 52.1
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 1.6e-26 123.2 91 69.2
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 4.7e-26 121.7 113 53.1
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 8.8e-25 117.5 89 65.2
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 5.3e-22 108.2 91 58.2
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.2e-18 97.1 55 85.5
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 2.6e-16 89.4 147 38.8
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 1.0e-12 77.4 81 61.7
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.3e-12 77.0 44 81.8
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 1.1e-11 73.9 50 56.0
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 2.1e-10 69.7 66 56.1
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 1.4e-09 67.0 51 58.8


User provided reference genes

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