Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009895g0010 Nicotiana tabacum HOM05D006304 ORTHO05D008584 0.0e+00 1655.6 875 100.0
Nitab4.5_0000269g0180 Nicotiana tabacum HOM05D006304 ORTHO05D008584 0.0e+00 1417.9 815 92.5
Sopen06g027340 Solanum pennellii HOM05D006304 ORTHO05D008584 0.0e+00 1104.4 867 69.9
Solyc06g071040.4 Solanum lycopersicum HOM05D006304 ORTHO05D008584 3.6e-307 1058.1 867 67.9
Peaxi162Scf00013g00025 Petunia axillaris HOM05D006304 ORTHO05D008584 8.3e-288 993.8 910 68.0
CAN.G628.40 Capsicum annuum HOM05D006304 ORTHO05D008584 8.6e-269 930.6 872 63.9
Oeu048746.1 Olea europaea HOM05D006304 ORTHO05D008584 7.0e-186 655.2 838 52.6
Actinidia34979 Actinidia chinensis HOM05D006304 ORTHO05D008584 2.8e-182 643.3 949 45.6
Rhsim12G0159100 Rhododendron simsii HOM05D006304 ORTHO05D008584 8.9e-181 638.3 909 47.2
vmacro16566 Vaccinium macrocarpon HOM05D006304 ORTHO05D008584 1.8e-178 630.6 946 45.2
SalBow5G3794 Salvia bowleyana HOM05D006304 ORTHO05D008584 3.2e-178 629.8 913 48.8
PGSC0003DMG402033036 Solanum tuberosum HOM05D006304 ORTHO05D008584 4.9e-171 605.9 564 62.2
GSVIVG01008051001 Vitis vinifera HOM05D006304 ORTHO05D008584 1.9e-167 594.0 833 46.9
Cc04_g15450 Coffea canephora HOM05D006304 ORTHO05D008584 4.7e-166 589.3 550 61.8
SGA_v2.0_scaffold56G20049 Striga asiatica HOM05D006304 ORTHO05D008584 1.8e-165 587.4 839 49.8
Cfa018983 Carpinus fangiana HOM05D006304 ORTHO05D008584 5.8e-164 582.4 945 44.4
Migut.I00131 Erythranthe guttata HOM05D006304 ORTHO05D008584 1.9e-162 577.4 843 50.4
CsaV3_1G007890 Cucumis sativus L. HOM05D006304 ORTHO05D008584 3.6e-158 563.1 903 43.5
Dinv38671 Davidia involucrata HOM05D006304 ORTHO05D008584 3.1e-157 560.1 944 42.3
Actinidia19056 Actinidia chinensis HOM05D006304 ORTHO05D008584 1.2e-156 558.1 956 43.4
MELO3C002204.2 Cucumis melo HOM05D006304 ORTHO05D008584 9.9e-156 555.1 902 43.5
Lj5A115T69 Lonicera japonica HOM05D006304 ORTHO05D008584 1.3e-155 554.7 982 43.1
Prupe.5G187100 Prunus persica HOM05D006304 ORTHO05D008584 6.0e-153 545.8 858 44.3
Sc10g0009990 Simmondsia chinensis HOM05D006304 ORTHO05D008584 6.0e-153 545.8 881 44.7
TAR629G0077 Trochodendron aralioides HOM05D006304 ORTHO05D008584 3.9e-152 543.1 524 60.5
MD14G1195600 Malus domestica HOM05D006304 ORTHO05D008584 8.6e-152 542.0 840 45.5
AUR62021733 Chenopodium quinoa HOM05D006304 ORTHO05D008584 1.1e-151 541.6 933 42.8
Cpa.g.sc17.206 Carica papaya HOM05D006304 ORTHO05D008584 4.3e-151 539.7 846 43.6
AUR62008366 Chenopodium quinoa HOM05D006304 ORTHO05D008584 5.6e-151 539.3 923 42.9
TWI60G1649 Tripterygium wilfordii HOM05D006304 ORTHO05D008584 7.3e-151 538.9 837 47.4
TAR371G0034 Trochodendron aralioides HOM05D006304 ORTHO05D008584 1.2e-150 538.1 992 40.0
VMungo1215G2961 Vigna mungo HOM05D006304 ORTHO05D008584 1.2e-150 538.1 831 44.9
arahy.Tifrunner.gnm1.ann1.E16Z9R Arachis hypogaea HOM05D006304 ORTHO05D008584 3.6e-150 536.6 834 44.6
CiPaw.11G039300 Carya illinoinensis HOM05D006304 ORTHO05D008584 6.2e-150 535.8 723 47.7
Lj4g0004911 Lotus japonicus HOM05D006304 ORTHO05D008584 6.2e-150 535.8 818 44.3
Hund09367 Selenicereus undatus HOM05D006304 ORTHO05D008584 1.2e-148 531.6 961 41.8
CANSAT80G1066 Cannabis sativa HOM05D006304 ORTHO05D008584 1.5e-148 531.2 828 44.2
DCAR_021535 Daucus carota HOM05D006304 ORTHO05D008584 4.4e-148 529.6 878 42.8
MD06G1188800 Malus domestica HOM05D006304 ORTHO05D008584 4.4e-148 529.6 833 43.8
RcHm_v2.0_Chr7g0180671 Rosa chinensis HOM05D006304 ORTHO05D008584 4.4e-148 529.6 863 43.7
Aqoxy3G00750 Aquilegia oxysepala HOM05D006304 ORTHO05D008584 1.3e-147 528.1 838 43.1
Sed0028137 Sechium edule HOM05D006304 ORTHO05D008584 6.4e-147 525.8 831 44.9
Haze_07372 Corylus avellana HOM05D006304 ORTHO05D008584 2.4e-146 523.9 923 42.9
Gorai.008G191000 Gossypium raimondii HOM05D006304 ORTHO05D008584 1.2e-145 521.5 737 47.4
Phvul.003G192300 Phaseolus vulgaris HOM05D006304 ORTHO05D008584 7.8e-145 518.8 821 44.8
FvH4_5g15410 Fragaria vesca HOM05D006304 ORTHO05D008584 1.0e-144 518.5 842 45.0
Gohir.D12G178452 Gossypium hirsutum HOM05D006304 ORTHO05D008584 3.9e-144 516.5 753 46.6
Gohir.A12G175370 Gossypium hirsutum HOM05D006304 ORTHO05D008584 5.1e-144 516.2 831 46.1
Glyma.05G029400 Glycine max HOM05D006304 ORTHO05D008584 2.1e-142 510.8 508 58.5
Ca_21844_v3 Cicer arietinum L. HOM05D006304 ORTHO05D008584 2.8e-142 510.4 520 57.3
Glyma.17G097500 Glycine max HOM05D006304 ORTHO05D008584 3.6e-142 510.0 508 59.1
ECA247G4106 Erigeron canadensis HOM05D006304 ORTHO05D008584 6.2e-142 509.2 443 62.5
Duzib205G0644 Durio zibethinus HOM05D006304 ORTHO05D008584 1.1e-141 508.4 639 50.9
TPR.G38415 Trifolium pratense HOM05D006304 ORTHO05D008584 1.4e-141 508.1 530 55.5
Psat4g053720 Pisum sativum HOM05D006304 ORTHO05D008584 3.1e-141 506.9 500 58.4
ClCG01G014430 Citrullus lanatus HOM05D006304 ORTHO05D008584 4.0e-141 506.5 982 40.1
Ciclev10019215m.g Citrus clementina HOM05D006304 ORTHO05D008584 2.0e-140 504.2 612 53.6
Ah.11g048730 Amaranthus hybridus HOM05D006304 ORTHO05D008584 2.6e-140 503.8 934 41.5
Medtr4g107890 Medicago truncatula HOM05D006304 ORTHO05D008584 5.8e-140 502.7 529 57.5
Eucgr.B00434 Eucalyptus grandis HOM05D006304 ORTHO05D008584 7.1e-138 495.7 863 41.8
Nn3g17140 Nelumbo nucifera HOM05D006304 ORTHO05D008584 9.3e-138 495.4 492 58.5
FAN04G3159 Fragaria x ananassa HOM05D006304 ORTHO05D008584 3.5e-137 493.4 825 43.4
MBI12_g19403_MAGBIO Magnolia biondii HOM05D006304 ORTHO05D008584 4.6e-137 493.0 525 56.4
arahy.Tifrunner.gnm1.ann1.YQHF2A Arachis hypogaea HOM05D006304 ORTHO05D008584 6.0e-137 492.7 921 41.6
FAN08G3028 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.7e-136 491.1 825 43.2
Lsat_1_v5_gn_1_10941 Lactuca sativa HOM05D006304 ORTHO05D008584 1.7e-136 491.1 895 41.5
PGR083G1524 Punica granatum HOM05D006304 ORTHO05D008584 3.3e-135 486.9 833 41.8
Thecc.03G080300 Theobroma cacao HOM05D006304 ORTHO05D008584 1.6e-134 484.6 490 58.6
Potri.015G064600 Populus trichocarpa HOM05D006304 ORTHO05D008584 1.5e-132 478.0 826 44.7
FAN18G3228 Fragaria x ananassa HOM05D006304 ORTHO05D008584 6.4e-131 472.6 874 42.0
HanXRQChr02g0045271 Helianthus annuus HOM05D006304 ORTHO05D008584 1.9e-130 471.1 474 57.2
COL.COLO4_05911 Corchorus olitorius HOM05D006304 ORTHO05D008584 5.5e-130 469.5 459 58.6
Sabra15G0090300 Salix brachista HOM05D006304 ORTHO05D008584 5.5e-130 469.5 445 58.9
EL10Ac5g10949 Beta vulgaris HOM05D006304 ORTHO05D008584 1.8e-128 464.5 969 38.9
Sp2g25930 Schrenkiella parvula HOM05D006304 ORTHO05D008584 1.5e-127 461.5 503 54.1
Manes.06G096000 Manihot esculenta HOM05D006304 ORTHO05D008584 1.3e-126 458.4 827 41.2
THA.LOC104821457 Tarenaya hassleriana HOM05D006304 ORTHO05D008584 2.8e-126 457.2 443 57.3
Atru.chr9.2307 Acer truncatum HOM05D006304 ORTHO05D008584 4.0e-125 453.4 781 43.5
unitig_0.g2536 Utricularia gibba HOM05D006304 ORTHO05D008584 4.0e-125 453.4 482 53.3
BcaB02g09690 Brassica carinata HOM05D006304 ORTHO05D008584 5.8e-124 449.5 386 61.9
Thhalv10003777m.g Eutrema salsugineum HOM05D006304 ORTHO05D008584 7.6e-124 449.1 502 54.2
A06p29540 Brassica napus HOM05D006304 ORTHO05D008584 1.1e-122 445.3 385 61.6
C03p63960 Brassica napus HOM05D006304 ORTHO05D008584 9.3e-122 442.2 406 60.1
BcaC01g02519 Brassica carinata HOM05D006304 ORTHO05D008584 2.1e-121 441.0 386 61.7
AL8G39730 Arabidopsis lyrata HOM05D006304 ORTHO05D008584 3.5e-121 440.3 387 60.5
CDE06G1311 Ceratophyllum demersum HOM05D006304 ORTHO05D008584 2.3e-120 437.6 633 46.3
FAN13G0685 Fragaria x ananassa HOM05D006304 ORTHO05D008584 2.3e-120 437.6 828 41.3
AT5G62760 Arabidopsis thaliana HOM05D006304 ORTHO05D008584 8.7e-120 435.6 502 52.0
CARHR276550 Cardamine hirsuta HOM05D006304 ORTHO05D008584 8.7e-120 435.6 472 53.6
Carub.0008s2349 Capsella rubella HOM05D006304 ORTHO05D008584 5.7e-119 433.0 647 46.7
BraA06t25899Z Brassica rapa HOM05D006304 ORTHO05D008584 7.4e-119 432.6 428 56.3
Oeu006477.2 Olea europaea HOM05D006304 ORTHO05D008584 9.6e-119 432.2 850 40.6
BolC3t18650H Brassica oleracea HOM05D006304 ORTHO05D008584 7.6e-116 422.5 433 55.9
ATR1120G178 Amborella trichopoda HOM05D006304 ORTHO05D008584 5.0e-115 419.9 527 50.9
HPP92_021789 Vanilla planifolia HOM05D006304 ORTHO05D008584 6.5e-115 419.5 607 46.5
Os02g0215000 Oryza sativa ssp. japonica HOM05D006304 ORTHO05D008584 4.6e-113 413.3 509 51.1
Zm00001eb240230 Zea mays HOM05D006304 ORTHO05D008584 2.3e-112 411.0 509 50.9
SEGI_29067 Sequoiadendron giganteum HOM05D006304 ORTHO05D008584 4.8e-110 403.3 414 55.8
Aa31LG11G920 Aethionema arabicum HOM05D006304 ORTHO05D008584 3.8e-107 393.7 484 50.4
CSS0050297 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 5.3e-101 373.2 385 56.1
Mapoly0068s0038 Marchantia polymorpha HOM05D006304 ORTHO05D008584 1.4e-98 365.2 423 50.4
Lalb_Chr12g0196741 Lupinus albus HOM05D006304 ORTHO05D008584 4.2e-98 363.6 295 64.4
PSO017G6991 Papaver somniferum HOM05D006304 ORTHO05D008584 3.7e-94 350.5 792 39.4
CBR_g5693 Chara braunii HOM05D006304 ORTHO05D008584 1.6e-76 292.0 536 38.8
QL10p015696 Quercus lobata HOM05D006304 ORTHO05D008584 1.6e-76 292.0 665 37.9
Duzib084G0195 Durio zibethinus HOM05D006304 ORTHO05D008584 3.6e-73 280.8 296 53.7
Actinidia28212 Actinidia chinensis HOM05D006304 ORTHO05D008584 1.1e-40 172.9 174 55.7
Cre14.g629400 Chlamydomonas reinhardtii HOM05D006304 ORTHO05D008584 2.4e-37 161.8 205 40.5
QL10p015692 Quercus lobata HOM05D006304 ORTHO05D008584 2.4e-32 145.2 112 64.3
Lalb_Chr12g0196731 Lupinus albus HOM05D006304 ORTHO05D008584 1.7e-27 129.0 114 60.5
CSS0027196 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 3.1e-16 91.7 89 58.4
Dinv19922 Davidia involucrata HOM05D006304 ORTHO05D008584 2.6e-15 88.6 166 39.8
QL10p015689 Quercus lobata HOM05D006304 ORTHO05D008584 2.1e-12 79.0 90 57.8
Duzib084G1176 Durio zibethinus HOM05D006304 ORTHO05D008584 1.9e-10 72.4 82 48.8
CSS0027880 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 9.0e-08 63.5 136 37.5


User provided reference genes

Program Settings