Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009882g0030 Nicotiana tabacum HOM05D005805 ORTHO05D007226 8.0e-192 673.7 368 100.0
Nitab4.5_0001714g0200 Nicotiana tabacum HOM05D005805 ORTHO05D007226 1.2e-168 596.7 343 96.2
CAN.G981.40 Capsicum annuum HOM05D005805 ORTHO05D007226 4.0e-159 565.1 371 82.2
Sopen08g028610 Solanum pennellii HOM05D005805 ORTHO05D007226 1.1e-151 540.4 369 79.9
PGSC0003DMG400022755 Solanum tuberosum HOM05D005805 ORTHO05D007226 1.5e-145 520.0 341 81.8
Solyc08g080260.4 Solanum lycopersicum HOM05D005805 ORTHO05D007226 2.8e-144 515.8 375 76.3
Peaxi162Scf00620g00920 Petunia axillaris HOM05D005805 ORTHO05D007226 8.1e-144 514.2 380 74.2
CSS0012055 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 1.0e-117 427.6 374 64.4
CSS0001301 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 2.3e-114 416.4 378 62.4
Cc08_g13930 Coffea canephora HOM05D005805 ORTHO05D007226 1.3e-112 410.6 369 59.1
Actinidia02051 Actinidia chinensis HOM05D005805 ORTHO05D007226 3.1e-111 406.0 373 60.6
Dinv39015 Davidia involucrata HOM05D005805 ORTHO05D007226 9.1e-111 404.4 345 63.5
vmacro00648 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 4.5e-110 402.1 356 63.8
Hma1.2p1_0371F.1_g138200 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 5.9e-110 401.7 362 61.6
Actinidia14511 Actinidia chinensis HOM05D005805 ORTHO05D007226 5.0e-109 398.7 373 60.3
Oeu031590.1 Olea europaea HOM05D005805 ORTHO05D007226 8.5e-109 397.9 390 57.7
Lsat_1_v5_gn_6_12941 Lactuca sativa HOM05D005805 ORTHO05D007226 3.2e-108 396.0 370 59.7
Migut.A00918 Erythranthe guttata HOM05D005805 ORTHO05D007226 1.2e-107 394.0 393 59.3
Sed0020250 Sechium edule HOM05D005805 ORTHO05D007226 1.8e-106 390.2 372 58.9
Eucgr.D01927 Eucalyptus grandis HOM05D005805 ORTHO05D007226 1.1e-105 387.5 402 56.0
GSVIVG01019866001 Vitis vinifera HOM05D005805 ORTHO05D007226 8.2e-104 381.3 374 57.8
Ca_06662_v3 Cicer arietinum L. HOM05D005805 ORTHO05D007226 3.1e-103 379.4 375 55.7
TAR629G3121 Trochodendron aralioides HOM05D005805 ORTHO05D007226 5.3e-103 378.6 374 57.5
VMungo1215G3124 Vigna mungo HOM05D005805 ORTHO05D007226 7.0e-103 378.3 381 56.4
Lalb_Chr16g0379971 Lupinus albus HOM05D005805 ORTHO05D007226 1.5e-102 377.1 375 55.5
Glyma.11G026600 Glycine max HOM05D005805 ORTHO05D007226 1.7e-101 373.6 381 56.4
HanXRQChr02g0048701 Helianthus annuus HOM05D005805 ORTHO05D007226 8.5e-101 371.3 368 58.2
QL12p017075 Quercus lobata HOM05D005805 ORTHO05D007226 1.1e-100 370.9 452 53.5
Nn1g01331 Nelumbo nucifera HOM05D005805 ORTHO05D007226 1.4e-100 370.5 374 57.8
Ciclev10020090m.g Citrus clementina HOM05D005805 ORTHO05D007226 1.2e-99 367.5 468 53.6
MELO3C005626.2 Cucumis melo HOM05D005805 ORTHO05D007226 3.6e-99 365.9 349 59.9
Glyma.01G215800 Glycine max HOM05D005805 ORTHO05D007226 3.6e-99 365.9 380 55.0
arahy.Tifrunner.gnm1.ann1.8FZ8QS Arachis hypogaea HOM05D005805 ORTHO05D007226 1.0e-98 364.4 423 53.9
TAR375G0540 Trochodendron aralioides HOM05D005805 ORTHO05D007226 3.0e-98 362.8 374 55.3
Phvul.002G153800 Phaseolus vulgaris HOM05D005805 ORTHO05D007226 9.7e-97 357.8 347 57.9
CiPaw.11G141700 Carya illinoinensis HOM05D005805 ORTHO05D007226 1.3e-96 357.5 454 50.7
Duzib068G1011 Durio zibethinus HOM05D005805 ORTHO05D007226 1.4e-95 354.0 371 53.9
Lalb_Chr05g0214771 Lupinus albus HOM05D005805 ORTHO05D007226 1.8e-95 353.6 378 54.0
ClCG01G003160 Citrullus lanatus HOM05D005805 ORTHO05D007226 4.1e-95 352.4 418 51.4
Medtr5g010950 Medicago truncatula HOM05D005805 ORTHO05D007226 2.9e-93 346.3 379 54.4
ECA233G3280 Erigeron canadensis HOM05D005805 ORTHO05D007226 6.5e-93 345.1 439 48.1
Psat2g181520 Pisum sativum HOM05D005805 ORTHO05D007226 6.5e-93 345.1 444 47.5
Duzib084G0260 Durio zibethinus HOM05D005805 ORTHO05D007226 8.5e-93 344.7 445 51.7
Lj2A197T60 Lonicera japonica HOM05D005805 ORTHO05D007226 8.5e-93 344.7 371 54.7
TPR.G6662 Trifolium pratense HOM05D005805 ORTHO05D007226 1.5e-92 344.0 443 47.4
Duzib205G1286 Durio zibethinus HOM05D005805 ORTHO05D007226 3.2e-92 342.8 439 51.5
Thecc.03G270600 Theobroma cacao HOM05D005805 ORTHO05D007226 3.2e-92 342.8 436 50.9
PGR031G2899 Punica granatum HOM05D005805 ORTHO05D007226 6.1e-91 338.6 430 49.1
Oeu001898.3 Olea europaea HOM05D005805 ORTHO05D007226 6.7e-90 335.1 374 53.7
Cfa012095 Carpinus fangiana HOM05D005805 ORTHO05D007226 8.8e-90 334.7 484 48.8
Gorai.003G162800 Gossypium raimondii HOM05D005805 ORTHO05D007226 3.3e-89 332.8 457 49.0
Gohir.A03G015238 Gossypium hirsutum HOM05D005805 ORTHO05D007226 5.7e-89 332.0 448 49.1
Gohir.D03G155100 Gossypium hirsutum HOM05D005805 ORTHO05D007226 5.7e-89 332.0 457 49.0
Potri.001G111100 Populus trichocarpa HOM05D005805 ORTHO05D007226 7.5e-89 331.6 492 43.5
Lj2g0007037 Lotus japonicus HOM05D005805 ORTHO05D007226 2.8e-88 329.7 484 46.9
Prupe.5G089600 Prunus persica HOM05D005805 ORTHO05D007226 7.0e-87 325.1 512 46.1
CiPaw.12G099000 Carya illinoinensis HOM05D005805 ORTHO05D007226 9.1e-87 324.7 462 49.1
CsaV3_5G003280 Cucumis sativus L. HOM05D005805 ORTHO05D007226 9.1e-87 324.7 305 58.7
MD06G1071900 Malus domestica HOM05D005805 ORTHO05D007226 1.2e-86 324.3 499 45.1
Aqoxy7G00467 Aquilegia oxysepala HOM05D005805 ORTHO05D007226 1.6e-86 323.9 330 56.1
THA.LOC104814292 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 2.7e-86 323.2 411 48.4
MD04G1068600 Malus domestica HOM05D005805 ORTHO05D007226 7.7e-86 321.6 519 41.8
HanXRQChr07g0188541 Helianthus annuus HOM05D005805 ORTHO05D007226 1.3e-85 320.9 332 55.4
Sc01g0008800 Simmondsia chinensis HOM05D005805 ORTHO05D007226 1.3e-85 320.9 450 45.6
FvH4_5g01420 Fragaria vesca HOM05D005805 ORTHO05D007226 3.8e-85 319.3 490 46.3
FAN13G0947 Fragaria x ananassa HOM05D005805 ORTHO05D007226 5.0e-85 318.9 482 46.7
Gorai.004G207600 Gossypium raimondii HOM05D005805 ORTHO05D007226 1.5e-84 317.4 400 52.0
Potri.003G120900 Populus trichocarpa HOM05D005805 ORTHO05D007226 1.9e-84 317.0 483 46.0
FAN18G3929 Fragaria x ananassa HOM05D005805 ORTHO05D007226 3.2e-84 316.2 490 46.1
FAN04G0223 Fragaria x ananassa HOM05D005805 ORTHO05D007226 4.2e-84 315.8 491 46.0
FAN08G1094 Fragaria x ananassa HOM05D005805 ORTHO05D007226 4.2e-84 315.8 500 45.4
arahy.Tifrunner.gnm1.ann1.J6ALFQ Arachis hypogaea HOM05D005805 ORTHO05D007226 5.5e-84 315.5 491 45.0
THA.LOC104806368 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 1.2e-83 314.3 420 51.4
Sed0020925 Sechium edule HOM05D005805 ORTHO05D007226 2.1e-83 313.5 301 56.8
TWI81G0996 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 3.6e-83 312.8 470 47.2
BraA09t38298Z Brassica rapa HOM05D005805 ORTHO05D007226 4.7e-83 312.4 418 50.7
Thhalv10028709m.g Eutrema salsugineum HOM05D005805 ORTHO05D007226 8.0e-83 311.6 416 50.7
A02p25990 Brassica napus HOM05D005805 ORTHO05D007226 2.3e-82 310.1 382 53.7
BraA02t07597Z Brassica rapa HOM05D005805 ORTHO05D007226 2.3e-82 310.1 382 53.7
BolC9t56310H Brassica oleracea HOM05D005805 ORTHO05D007226 6.8e-82 308.5 417 46.3
Aa31LG9G10640 Aethionema arabicum HOM05D005805 ORTHO05D007226 1.2e-81 307.8 411 51.6
Dinv37696 Davidia involucrata HOM05D005805 ORTHO05D007226 1.2e-81 307.8 306 57.5
CANSAT21G1670 Cannabis sativa HOM05D005805 ORTHO05D007226 1.5e-81 307.4 546 39.4
Rhsim08G0109800 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.6e-81 306.6 351 54.7
unitig_8.g3899 Utricularia gibba HOM05D005805 ORTHO05D007226 1.8e-79 300.4 373 51.5
A09p27320 Brassica napus HOM05D005805 ORTHO05D007226 2.4e-79 300.1 441 47.4
Sabra01G0084700 Salix brachista HOM05D005805 ORTHO05D007226 2.4e-79 300.1 501 43.5
C09p34650 Brassica napus HOM05D005805 ORTHO05D007226 5.4e-79 298.9 441 43.8
BcaB05g23807 Brassica carinata HOM05D005805 ORTHO05D007226 9.1e-79 298.1 413 48.4
AL6G46500 Arabidopsis lyrata HOM05D005805 ORTHO05D007226 5.9e-78 295.4 443 48.1
Gohir.A08G178400 Gossypium hirsutum HOM05D005805 ORTHO05D007226 7.7e-78 295.0 476 44.5
MBI04_g40844_MAGBIO Magnolia biondii HOM05D005805 ORTHO05D007226 7.7e-78 295.0 372 49.2
TWI60G0251 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 8.6e-77 291.6 484 43.4
RcHm_v2.0_Chr7g0199441 Rosa chinensis HOM05D005805 ORTHO05D007226 1.1e-76 291.2 512 42.8
Manes.01G068001 Manihot esculenta HOM05D005805 ORTHO05D007226 3.3e-76 289.7 427 48.5
CARHR254520 Cardamine hirsuta HOM05D005805 ORTHO05D007226 1.6e-75 287.3 414 47.1
Carub.0006s3090 Capsella rubella HOM05D005805 ORTHO05D007226 2.1e-75 287.0 436 47.0
EL10Ac5g12722 Beta vulgaris HOM05D005805 ORTHO05D007226 6.8e-74 282.0 459 45.1
Sp6g05660 Schrenkiella parvula HOM05D005805 ORTHO05D007226 9.8e-73 278.1 407 47.4
Haze_08957 Corylus avellana HOM05D005805 ORTHO05D007226 2.8e-72 276.6 497 44.5
HPP92_020989 Vanilla planifolia HOM05D005805 ORTHO05D007226 5.4e-71 272.3 428 42.3
ATR0757G009 Amborella trichopoda HOM05D005805 ORTHO05D007226 3.5e-70 269.6 330 47.9
AUR62010661 Chenopodium quinoa HOM05D005805 ORTHO05D007226 4.5e-70 269.2 445 42.9
SalBow6G0943 Salvia bowleyana HOM05D005805 ORTHO05D007226 3.3e-68 263.1 379 47.8
AT4G11790 Arabidopsis thaliana HOM05D005805 ORTHO05D007226 1.6e-67 260.8 452 42.7
AUR62017300 Chenopodium quinoa HOM05D005805 ORTHO05D007226 2.8e-67 260.0 463 40.0
BcaC03g16328 Brassica carinata HOM05D005805 ORTHO05D007226 6.1e-67 258.8 320 54.4
CDE11G0359 Ceratophyllum demersum HOM05D005805 ORTHO05D007226 2.3e-66 256.9 498 36.5
PSO478G0076 Papaver somniferum HOM05D005805 ORTHO05D007226 4.0e-66 256.1 588 35.5
PSO782G3262 Papaver somniferum HOM05D005805 ORTHO05D007226 1.9e-63 247.3 587 35.3
Ah.12g057730 Amaranthus hybridus HOM05D005805 ORTHO05D007226 2.4e-63 246.9 482 39.8
Manes.02G028100 Manihot esculenta HOM05D005805 ORTHO05D007226 6.6e-61 238.8 165 73.3
Os03g0667700 Oryza sativa ssp. japonica HOM05D005805 ORTHO05D007226 6.6e-61 238.8 384 41.1
Zm00001eb073520 Zea mays HOM05D005805 ORTHO05D007226 1.1e-60 238.0 444 39.2
Hund28361 Selenicereus undatus HOM05D005805 ORTHO05D007226 2.3e-58 230.3 508 33.7
Hund28365 Selenicereus undatus HOM05D005805 ORTHO05D007226 2.3e-58 230.3 508 33.7
C02p41470 Brassica napus HOM05D005805 ORTHO05D007226 2.0e-57 227.3 324 50.6
COL.COLO4_05276 Corchorus olitorius HOM05D005805 ORTHO05D007226 3.7e-56 223.0 138 76.1
BcaB01g01678 Brassica carinata HOM05D005805 ORTHO05D007226 3.2e-55 219.9 339 42.8
vmacro10803 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 1.3e-53 214.5 333 45.6
TAR374G1484 Trochodendron aralioides HOM05D005805 ORTHO05D007226 1.6e-51 207.6 149 72.5
Gohir.D08G196900 Gossypium hirsutum HOM05D005805 ORTHO05D007226 3.7e-48 196.4 148 68.2
Cpa.g.sc29.9 Carica papaya HOM05D005805 ORTHO05D007226 1.7e-40 171.0 387 35.1
Ah.02g116420 Amaranthus hybridus HOM05D005805 ORTHO05D007226 3.9e-37 159.8 446 31.8
Atru.chr9.1535 Acer truncatum HOM05D005805 ORTHO05D007226 4.3e-36 156.4 225 48.0
BolC2t10164H Brassica oleracea HOM05D005805 ORTHO05D007226 9.6e-36 155.2 109 70.6
AagrBONN_evm.TU.Sc2ySwM_344.4489 Anthoceros agrestis HOM05D005805 ORTHO05D007226 1.0e-29 135.2 357 31.9
DCAR_006764 Daucus carota HOM05D005805 ORTHO05D007226 8.1e-27 125.6 138 51.4
COL.COLO4_05274 Corchorus olitorius HOM05D005805 ORTHO05D007226 2.7e-22 110.5 73 74.0
Hma1.2p1_0002F.1_g002590 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 1.5e-20 104.8 73 71.2
SGA_v2.0_scaffold60G20821 Striga asiatica HOM05D011763 ORTHO05D014257 3.1e-18 97.1 349 30.1
SGA_v2.0_scaffold60G21020 Striga asiatica HOM05D011763 ORTHO05D014257 1.5e-17 94.7 157 37.6
CBR_g49019 Chara braunii HOM05D005805 ORTHO05D007226 8.7e-13 79.0 104 39.4


User provided reference genes

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