Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.1e-125 453.4 230 100.0
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 1.6e-84 316.6 324 59.6
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 8.5e-83 310.8 325 59.1
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 8.5e-83 310.8 325 59.1
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 4.4e-79 298.5 323 56.7
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 1.2e-73 280.4 324 52.5
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 4.7e-73 278.5 324 52.5
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 2.0e-71 273.1 329 50.8
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 4.4e-71 271.9 280 58.9
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 9.1e-69 264.2 319 53.0
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 1.7e-67 260.0 312 52.2
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 2.3e-67 259.6 325 50.2
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 8.6e-67 257.7 334 47.0
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 1.1e-66 257.3 327 49.8
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 4.2e-66 255.4 339 49.6
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.2e-65 253.8 312 50.0
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 1.2e-65 253.8 322 50.0
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 2.8e-65 252.7 321 50.8
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 4.7e-65 251.9 312 49.4
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 8.0e-65 251.1 322 49.7
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 8.0e-65 251.1 322 50.0
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 8.0e-65 251.1 326 48.8
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.4e-64 250.4 322 49.7
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 5.2e-64 248.4 319 48.6
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 1.5e-63 246.9 320 47.8
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 2.0e-63 246.5 317 48.6
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 2.0e-63 246.5 320 50.3
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 2.0e-63 246.5 320 49.7
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 2.6e-63 246.1 320 48.8
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 9.8e-63 244.2 320 49.1
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 1.3e-62 243.8 295 51.2
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 1.3e-62 243.8 311 48.6
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 2.8e-62 242.7 273 53.5
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 2.8e-62 242.7 322 48.1
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 2.8e-62 242.7 322 48.1
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 2.8e-62 242.7 322 47.8
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 4.9e-62 241.9 318 48.7
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 6.3e-62 241.5 322 48.4
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 6.3e-62 241.5 320 48.1
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 1.1e-61 240.7 320 49.1
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 1.1e-61 240.7 330 46.1
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 1.1e-61 240.7 320 47.5
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 1.4e-61 240.4 320 47.5
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 1.4e-61 240.4 324 47.5
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 3.1e-61 239.2 322 47.5
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 4.1e-61 238.8 318 47.8
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 9.2e-61 237.7 264 53.4
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 9.2e-61 237.7 301 49.2
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.2e-60 237.3 322 47.5
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 1.7e-59 233.4 390 40.8
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 5.0e-59 231.9 328 46.6
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 6.6e-59 231.5 320 46.2
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 8.6e-59 231.1 322 46.3
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 8.6e-59 231.1 327 46.5
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 8.6e-59 231.1 327 46.5
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 8.6e-59 231.1 322 46.0
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 1.9e-58 229.9 329 45.9
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 5.6e-58 228.4 221 58.8
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 7.3e-58 228.0 162 71.6
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 1.2e-57 227.3 425 40.2
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 2.1e-57 226.5 328 45.7
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 2.1e-57 226.5 318 46.2
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 2.8e-57 226.1 322 45.3
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 3.6e-57 225.7 318 45.6
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 1.4e-56 223.8 300 48.7
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 3.1e-56 222.6 329 45.0
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 3.1e-56 222.6 309 46.0
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 6.8e-56 221.5 329 45.0
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 8.9e-56 221.1 319 45.1
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 8.9e-56 221.1 160 70.0
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 2.0e-55 219.9 329 44.7
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 2.0e-55 219.9 329 44.7
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 2.6e-55 219.5 330 44.8
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 2.6e-55 219.5 330 44.8
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 7.5e-55 218.0 329 44.4
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 9.8e-55 217.6 315 47.6
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 2.2e-54 216.5 159 69.2
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 8.3e-54 214.5 155 68.4
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 1.9e-53 213.4 317 44.8
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 2.4e-53 213.0 160 68.8
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 3.2e-53 212.6 161 67.7
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 1.6e-52 210.3 317 44.2
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 3.5e-52 209.1 287 47.0
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 6.0e-52 208.4 294 46.3
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 7.8e-52 208.0 261 48.7
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 3.0e-51 206.1 262 49.2
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 2.5e-50 203.0 301 43.2
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 3.6e-49 199.1 281 44.1
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 6.2e-49 198.4 160 63.8
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 3.1e-48 196.1 261 46.7
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 6.8e-48 194.9 158 61.4
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 6.4e-46 188.3 313 40.6
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 1.4e-45 187.2 297 43.1
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 2.4e-45 186.4 248 49.2
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 2.7e-44 183.0 164 57.3
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 1.0e-43 181.0 291 42.6
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 8.9e-40 167.9 288 39.9
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 3.4e-39 166.0 294 39.8
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 2.9e-38 162.9 312 38.8
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.9e-37 160.2 266 39.5
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 9.2e-37 157.9 305 36.4
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 3.0e-35 152.9 105 66.7
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 1.1e-34 151.0 255 38.8
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 1.4e-32 144.1 106 67.9
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 2.3e-27 126.7 102 58.8
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 1.9e-26 123.6 67 83.6
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 5.6e-26 122.1 79 70.9
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 3.6e-25 119.4 641 23.9
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 3.1e-24 116.3 80 71.2
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 9.0e-24 114.8 206 39.8
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 6.4e-22 108.6 240 35.8
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 1.1e-21 107.8 61 98.4
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 2.8e-17 93.2 238 34.5
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 3.4e-15 86.3 148 39.9
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 4.5e-15 85.9 189 37.6
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 1.6e-12 77.4 176 38.1
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 1.0e-11 74.7 46 73.9
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 1.9e-10 70.5 52 71.2
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.1e-08 63.2 38 76.3
MSTRG.1710 Avicennia marina HOM05D006118 ORTHO05D007750 7.6e-07 58.5 30 80.0
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 8.4e-06 55.1 97 37.1


User provided reference genes

Program Settings