Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 8.2e-143 510.4 256 100.0
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 3.5e-138 495.0 256 96.9
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 1.8e-126 456.1 257 88.3
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 4.2e-123 444.9 257 87.5
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 6.7e-121 437.6 255 85.9
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 1.3e-119 433.3 255 85.1
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 2.2e-119 432.6 255 84.7
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 6.5e-100 367.9 256 72.7
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 1.6e-98 363.2 286 66.1
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 1.4e-97 360.1 249 70.3
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 1.4e-97 360.1 255 69.8
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 2.6e-96 355.9 257 69.3
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 3.7e-95 352.1 256 68.8
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 8.3e-95 350.9 256 68.0
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 1.1e-94 350.5 257 68.1
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 9.1e-94 347.4 239 71.5
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 4.5e-93 345.1 246 69.1
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 5.9e-93 344.7 255 67.8
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 5.9e-93 344.7 251 68.1
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 7.7e-93 344.4 248 71.0
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 1.0e-92 344.0 243 70.8
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 2.9e-92 342.4 255 69.0
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 2.9e-92 342.4 257 66.9
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 2.9e-92 342.4 255 67.5
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 2.9e-92 342.4 267 66.3
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 5.0e-92 341.7 257 66.1
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 1.1e-91 340.5 257 65.8
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 1.5e-91 340.1 243 71.2
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.5e-91 340.1 255 67.8
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 1.9e-91 339.7 255 65.9
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 2.5e-91 339.3 249 68.3
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 4.2e-91 338.6 244 69.3
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 5.5e-91 338.2 257 68.1
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 5.5e-91 338.2 241 68.5
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 5.5e-91 338.2 258 66.3
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 5.5e-91 338.2 257 66.1
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 9.5e-91 337.4 246 68.3
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 9.5e-91 337.4 245 67.8
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 2.1e-90 336.3 240 70.0
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 2.1e-90 336.3 258 66.7
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 2.1e-90 336.3 257 65.8
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 2.8e-90 335.9 256 65.6
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 6.1e-90 334.7 242 69.4
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 6.1e-90 334.7 245 68.6
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 1.0e-89 334.0 242 65.7
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 3.0e-89 332.4 230 67.8
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 3.0e-89 332.4 244 67.6
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 2.6e-88 329.3 244 67.6
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 5.7e-88 328.2 249 66.7
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 1.7e-87 326.6 242 66.9
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 1.7e-87 326.6 242 66.9
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 2.2e-87 326.2 242 67.4
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 3.7e-87 325.5 243 67.9
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 4.9e-87 325.1 242 67.4
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 8.3e-87 324.3 238 68.1
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 8.3e-87 324.3 255 64.3
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 2.4e-86 322.8 288 57.3
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 1.6e-85 320.1 285 60.0
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 3.5e-85 318.9 256 64.1
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 3.8e-84 315.5 255 61.6
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 3.8e-84 315.5 251 61.0
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 6.6e-84 314.7 251 60.6
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 1.9e-83 313.2 232 65.9
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 2.5e-83 312.8 258 60.1
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 2.5e-83 312.8 258 60.1
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 2.5e-83 312.8 258 60.1
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 3.3e-83 312.4 284 59.2
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 4.3e-83 312.0 285 58.9
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 5.6e-83 311.6 253 62.1
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 5.6e-83 311.6 253 62.1
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 7.3e-83 311.2 250 61.2
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 9.5e-83 310.8 251 61.8
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 1.6e-82 310.1 253 61.3
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.1e-82 309.7 284 59.2
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 4.7e-82 308.5 244 63.5
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 1.4e-81 307.0 258 58.5
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 3.0e-81 305.8 260 60.4
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 6.8e-81 304.7 244 62.7
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 6.8e-81 304.7 276 57.6
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 2.6e-80 302.8 246 63.4
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 7.5e-80 301.2 260 60.0
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 7.5e-80 301.2 250 59.6
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 2.2e-79 299.7 242 64.0
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 2.9e-79 299.3 218 67.0
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 8.3e-79 297.7 251 58.6
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 1.9e-78 296.6 269 57.6
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 2.0e-77 293.1 233 62.7
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 1.9e-75 286.6 255 57.3
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 1.9e-75 286.6 293 50.9
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 1.2e-74 283.9 274 56.6
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 1.6e-74 283.5 247 56.7
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 5.2e-73 278.5 297 52.5
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 9.8e-72 274.2 238 55.5
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 2.1e-69 266.5 233 61.4
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 3.3e-67 259.2 246 59.3
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 5.6e-67 258.5 189 69.3
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 1.2e-66 257.3 248 56.5
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 2.3e-60 236.5 181 66.3
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 2.4e-57 226.5 224 52.7
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 3.2e-54 216.1 271 44.6
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 3.3e-51 206.1 256 41.8
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 5.3e-49 198.7 133 69.9
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 2.1e-45 186.8 124 71.8
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 1.3e-44 184.1 271 46.1
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 4.3e-43 179.1 257 43.2
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 1.4e-41 174.1 255 45.1
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 6.9e-41 171.8 172 48.3
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 4.8e-34 149.1 121 57.9
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 2.1e-26 123.6 131 53.4
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 3.4e-24 116.3 152 48.0
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 3.9e-20 102.8 140 37.9
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 1.3e-18 97.8 104 55.8
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 4.8e-18 95.9 111 48.6
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 9.1e-09 65.1 38 81.6
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 1.2e-08 64.7 46 60.9
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.9e-07 60.1 50 50.0


User provided reference genes

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