Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009823g0010 Nicotiana tabacum HOM05D000354 ORTHO05D000747 9.4e-90 333.6 176 100.0
Nitab4.5_0000915g0060 Nicotiana tabacum HOM05D000830 ORTHO05D003205 4.4e-23 112.1 119 55.5
unitig_578.g16485 Utricularia gibba HOM05D000354 ORTHO05D000747 4.6e-20 102.1 128 47.7
Solyc10g011880.1 Solanum lycopersicum HOM05D000354 ORTHO05D000747 8.7e-19 97.8 164 46.3
PGSC0003DMG400019406 Solanum tuberosum HOM05D000354 ORTHO05D000747 1.9e-18 96.7 87 62.1
Peaxi162Scf00585g00061 Petunia axillaris HOM05D000354 ORTHO05D000747 7.3e-18 94.7 138 50.0
Sopen10g005680 Solanum pennellii HOM05D000354 ORTHO05D000747 1.6e-17 93.6 96 56.2
Solyc01g095180.2 Solanum lycopersicum HOM05D000354 ORTHO05D000747 9.0e-16 87.8 70 68.6
Sopen01g038970 Solanum pennellii HOM05D000354 ORTHO05D000747 9.0e-16 87.8 70 68.6
PGSC0003DMG400000070 Solanum tuberosum HOM05D000354 ORTHO05D000747 9.0e-16 87.8 70 68.6
MSTRG.20865 Avicennia marina HOM05D000354 ORTHO05D000747 7.1e-13 78.2 88 53.4
MSTRG.26866 Avicennia marina HOM05D000354 ORTHO05D000747 1.3e-11 73.9 72 56.9
MSTRG.4832 Avicennia marina HOM05D000354 ORTHO05D000747 1.3e-11 73.9 72 56.9
unitig_8.g3401 Utricularia gibba HOM05D000354 ORTHO05D000747 1.3e-11 73.9 49 69.4
Migut.B01803 Erythranthe guttata HOM05D000354 ORTHO05D000747 1.1e-10 70.9 91 47.3
Oeu054359.1 Olea europaea HOM05D000354 ORTHO05D000747 5.6e-10 68.6 62 59.7
Cc02_g38670 Coffea canephora HOM05D000354 ORTHO05D000747 7.4e-10 68.2 70 51.4
Oeu015215.1 Olea europaea HOM05D000354 ORTHO05D000747 1.6e-09 67.0 78 44.9
Migut.N01468 Erythranthe guttata HOM05D000354 ORTHO05D000747 1.8e-08 63.5 85 48.2
RcHm_v2.0_Chr1g0357831 Rosa chinensis HOM05D000354 ORTHO05D000747 2.4e-08 63.2 66 47.0
Hma1.2p1_0335F.1_g128820 Hydrangea macrophylla HOM05D000354 ORTHO05D000747 1.5e-07 60.5 60 51.7
Hma1.2p1_1959F.1_g309075 Hydrangea macrophylla HOM05D000354 ORTHO05D000747 1.5e-07 60.5 60 51.7
GSVIVG01026978001 Vitis vinifera HOM05D000354 ORTHO05D000747 1.5e-07 60.5 74 48.6
Lsat_1_v5_gn_4_34921 Lactuca sativa HOM05D000354 ORTHO05D000747 3.4e-07 59.3 100 39.0
Manes.01G251800 Manihot esculenta HOM05D000354 ORTHO05D000747 3.4e-07 59.3 74 40.5
TAR375G0907 Trochodendron aralioides HOM05D000354 ORTHO05D000747 5.8e-07 58.5 57 50.9
Actinidia02816 Actinidia chinensis HOM05D000354 ORTHO05D000747 1.3e-06 57.4 73 47.9
CARHR141440 Cardamine hirsuta HOM05D000354 ORTHO05D000747 1.3e-06 57.4 68 39.7
Thhalv10001804m.g Eutrema salsugineum HOM05D000354 ORTHO05D000747 1.3e-06 57.4 104 37.5
A04p01040 Brassica napus HOM05D000354 ORTHO05D000747 2.2e-06 56.6 75 45.3
BraA04t15821Z Brassica rapa HOM05D000354 ORTHO05D000747 2.2e-06 56.6 75 45.3
FAN03G2540 Fragaria x ananassa HOM05D000354 ORTHO05D000747 2.2e-06 56.6 71 40.8
Rhsim01G0165900 Rhododendron simsii HOM05D000354 ORTHO05D000747 2.2e-06 56.6 53 56.6
TAR374G1283 Trochodendron aralioides HOM05D000354 ORTHO05D000747 2.2e-06 56.6 82 39.0
Dinv43869 Davidia involucrata HOM05D000354 ORTHO05D000747 2.9e-06 56.2 49 59.2
Duzib133G0009 Durio zibethinus HOM05D000354 ORTHO05D000747 2.9e-06 56.2 78 43.6
Phvul.008G057200 Phaseolus vulgaris HOM05D000354 ORTHO05D000747 2.9e-06 56.2 69 44.9
QL04p055856 Quercus lobata HOM05D000354 ORTHO05D000747 3.8e-06 55.8 50 48.0
AL4G45410 Arabidopsis lyrata HOM05D000354 ORTHO05D000747 4.9e-06 55.5 75 41.3
Hma1.2p1_0623F.1_g191140 Hydrangea macrophylla HOM05D000354 ORTHO05D000747 4.9e-06 55.5 77 44.2
unitig_52.g17060 Utricularia gibba HOM05D000354 ORTHO05D000747 4.9e-06 55.5 78 42.3
A04p34300 Brassica napus HOM05D000354 ORTHO05D000747 6.4e-06 55.1 70 41.4
BraA04t18891Z Brassica rapa HOM05D000354 ORTHO05D000747 6.4e-06 55.1 70 41.4
CiPaw.02G035900 Carya illinoinensis HOM05D000354 ORTHO05D000747 6.4e-06 55.1 45 55.6
Gohir.A11G092800 Gossypium hirsutum HOM05D000354 ORTHO05D000747 6.4e-06 55.1 74 41.9
Medtr8g028465 Medicago truncatula HOM05D000354 ORTHO05D000747 6.4e-06 55.1 68 47.1
AT2G46160 Arabidopsis thaliana HOM05D000354 ORTHO05D000747 8.4e-06 54.7 70 47.1
Sabra02G0146300 Salix brachista HOM05D000354 ORTHO05D000747 8.4e-06 54.7 51 47.1
Thecc.01G351500 Theobroma cacao HOM05D000354 ORTHO05D000747 8.4e-06 54.7 53 49.1


User provided reference genes

Program Settings