Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 1.1e-244 849.7 500 100.0
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 4.0e-226 788.1 533 89.9
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 4.5e-161 572.0 552 69.9
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 7.1e-159 564.7 587 66.1
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 6.2e-147 525.0 465 74.8
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 1.7e-115 420.6 273 83.5
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 1.8e-114 417.2 560 55.9
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 1.4e-109 401.0 559 54.7
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 4.8e-107 392.5 320 83.8
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 2.7e-105 386.7 420 62.6
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 1.5e-103 380.9 561 52.6
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 5.5e-103 379.0 568 52.6
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 7.2e-103 378.6 559 53.3
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 1.8e-101 374.0 558 52.7
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 1.7e-99 367.5 558 52.0
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 3.1e-98 363.2 422 62.8
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 7.0e-98 362.1 554 50.4
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 3.5e-97 359.8 559 52.1
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 7.7e-97 358.6 525 52.0
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 1.8e-93 347.4 563 51.2
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 4.0e-93 346.3 519 52.6
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 8.9e-93 345.1 554 50.4
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 1.2e-92 344.7 527 51.2
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 2.6e-92 343.6 563 50.4
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 5.7e-92 342.4 550 50.5
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 9.8e-92 341.7 488 53.9
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 9.8e-92 341.7 503 52.7
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 1.7e-91 340.9 547 50.6
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 4.9e-91 339.3 548 49.5
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 8.3e-91 338.6 455 56.3
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 2.7e-89 333.6 513 52.0
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 7.3e-87 325.5 518 50.0
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 1.2e-86 324.7 513 50.7
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 1.2e-86 324.7 548 48.5
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 1.8e-85 320.9 488 51.8
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 5.2e-85 319.3 556 48.2
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 1.5e-84 317.8 472 54.0
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 1.3e-83 314.7 523 49.3
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 2.4e-82 310.5 523 48.6
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 5.4e-82 309.3 531 47.5
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 9.2e-82 308.5 558 48.2
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 3.5e-81 306.6 560 47.5
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 4.6e-81 306.2 489 49.5
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 3.0e-80 303.5 565 47.4
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 1.9e-79 300.8 331 54.1
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 4.3e-79 299.7 464 51.1
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 1.1e-77 295.0 559 47.2
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 2.3e-77 293.9 521 46.8
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 4.0e-77 293.1 476 51.1
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 5.2e-77 292.7 544 47.1
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 5.8e-76 289.3 474 50.8
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 7.5e-76 288.9 520 47.1
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 4.9e-75 286.2 562 46.4
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 6.4e-75 285.8 517 47.8
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 3.2e-74 283.5 565 46.5
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 4.1e-74 283.1 560 46.1
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 1.6e-73 281.2 562 37.0
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 2.1e-73 280.8 556 46.2
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 6.0e-73 279.3 563 46.2
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 7.8e-73 278.9 507 47.7
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.7e-72 277.7 565 46.0
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 2.3e-72 277.3 560 45.7
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 3.0e-72 276.9 520 47.1
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 5.1e-72 276.2 305 53.1
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 2.5e-71 273.9 560 47.1
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 4.3e-71 273.1 519 47.2
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 7.3e-71 272.3 476 47.9
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 3.6e-70 270.0 502 46.2
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 3.6e-70 270.0 269 75.8
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 7.1e-66 255.8 526 45.2
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 1.0e-64 251.9 326 45.7
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 1.0e-64 251.9 484 46.3
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 4.3e-63 246.5 292 49.3
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 1.6e-62 244.6 452 48.9
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 8.1e-62 242.3 374 54.8
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 4.4e-60 236.5 497 34.8
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 1.2e-57 228.4 467 45.8
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 8.7e-56 222.2 319 59.6
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 2.1e-54 217.6 263 50.6
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 6.2e-54 216.1 476 35.7
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 3.4e-52 210.3 145 80.0
CAN.G222.66 Capsicum annuum HOM05D006674 ORTHO05D007954 2.9e-51 207.2 341 46.3
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 1.1e-42 178.7 400 35.5
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 1.5e-39 168.3 520 39.4
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 1.4e-37 161.8 238 59.2
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 2.4e-29 134.4 183 47.5
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 1.0e-27 129.0 87 78.2
Nitab4.5_0009075g0020 Nicotiana tabacum HOM05D006674 ORTHO05D007954 7.2e-26 122.9 66 93.9
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 3.5e-25 120.6 184 41.8
Nitab4.5_0004239g0020 Nicotiana tabacum HOM05D006674 ORTHO05D007954 6.1e-25 119.8 68 91.2
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 1.3e-24 118.6 177 42.9
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 5.1e-24 116.7 263 50.6
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 1.9e-23 114.8 329 44.7
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 1.4e-21 108.6 407 37.1
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 5.3e-21 106.7 185 42.2
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 1.2e-20 105.5 200 38.5
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 8.5e-19 99.4 104 54.8
arahy.Tifrunner.gnm1.ann1.EIPD4W Arachis hypogaea HOM05D006674 ORTHO05D007954 2.1e-17 94.7 99 54.5
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 2.7e-17 94.4 100 56.0
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 7.9e-17 92.8 121 47.1
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.0e-16 92.4 417 33.6
Zm00001eb221070 Zea mays HOM05D006674 ORTHO05D007954 6.3e-14 83.2 210 31.9
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 8.2e-14 82.8 168 38.1
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 4.1e-13 80.5 82 52.4
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 1.3e-11 75.5 424 22.6
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 1.7e-11 75.1 134 43.3
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 6.5e-11 73.2 47 70.2
CSS0039398 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.1e-10 72.4 48 70.8
FAN19G0964 Fragaria x ananassa HOM05D000564 ORTHO05D004145 7.2e-10 69.7 59 57.6
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 3.6e-09 67.4 76 46.1
Oeu058058.1 Olea europaea HOM05D013212 ORTHO05D007954 2.3e-08 64.7 80 46.2
Hund13087 Selenicereus undatus HOM05D006674 ORTHO05D007954 5.7e-07 60.1 132 34.1
arahy.Tifrunner.gnm1.ann1.MX1HDN Arachis hypogaea HOM05D006674 ORTHO05D007954 9.7e-07 59.3 42 69.0
arahy.Tifrunner.gnm1.ann1.PS0MXP Arachis hypogaea HOM05D006674 ORTHO05D007954 9.7e-07 59.3 42 69.0
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 1.3e-06 58.9 57 50.9
arahy.Tifrunner.gnm1.ann1.ZN5I3T Arachis hypogaea HOM05D000189 ORTHO05D007954 2.2e-06 58.2 59 50.8
QL02p059301 Quercus lobata HOM05D006674 ORTHO05D012891 3.7e-06 57.4 37 75.7
arahy.Tifrunner.gnm1.ann1.2ASK5S Arachis hypogaea HOM05D000068 ORTHO05D026879 4.8e-06 57.0 43 65.1


User provided reference genes

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