Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 2.1e-95 352.4 189 100.0
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 1.5e-45 186.8 184 60.9
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 9.2e-43 177.6 181 58.0
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 1.6e-42 176.8 129 77.5
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 7.8e-42 174.5 181 56.9
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 1.8e-38 163.3 182 57.1
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 5.1e-25 118.6 190 43.2
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 2.5e-24 116.3 166 46.4
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 2.5e-24 116.3 166 46.4
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 3.3e-24 115.9 154 46.1
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 1.6e-23 113.6 187 42.8
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 8.1e-23 111.3 194 41.2
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.8e-22 110.2 187 38.5
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 6.9e-22 108.2 172 42.4
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 1.2e-21 107.5 164 42.1
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 2.0e-21 106.7 167 41.3
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 3.4e-21 105.9 189 38.1
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 3.4e-21 105.9 185 41.6
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 4.5e-21 105.5 165 43.0
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 4.5e-21 105.5 156 45.5
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 9.9e-21 104.4 165 44.2
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 1.3e-20 104.0 165 42.4
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.7e-20 103.6 172 43.6
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 2.2e-20 103.2 189 41.8
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 3.8e-20 102.4 191 38.2
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 3.8e-20 102.4 174 43.1
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 3.8e-20 102.4 172 40.7
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 6.4e-20 101.7 174 43.1
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.5e-19 99.8 192 39.1
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 3.2e-19 99.4 168 38.7
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 4.2e-19 99.0 183 38.8
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 4.2e-19 99.0 183 38.8
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 7.1e-19 98.2 181 39.2
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 7.1e-19 98.2 163 42.9
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 7.1e-19 98.2 168 39.9
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 9.3e-19 97.8 167 40.1
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 9.3e-19 97.8 168 42.3
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 9.3e-19 97.8 187 36.9
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 9.3e-19 97.8 189 37.6
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 1.2e-18 97.4 161 44.1
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.2e-18 97.4 196 35.7
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 2.1e-18 96.7 161 42.9
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 2.1e-18 96.7 165 41.2
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 2.7e-18 96.3 170 38.2
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 2.7e-18 96.3 188 35.6
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 4.6e-18 95.5 160 41.2
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 6.0e-18 95.1 168 39.9
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 6.0e-18 95.1 172 42.4
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 6.0e-18 95.1 158 40.5
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 7.9e-18 94.7 184 41.3
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 1.0e-17 94.4 161 41.0
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 1.0e-17 94.4 206 35.4
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.3e-17 94.0 171 40.9
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 1.8e-17 93.6 161 42.2
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 2.3e-17 93.2 167 38.3
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 2.3e-17 93.2 186 40.9
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 3.0e-17 92.8 176 39.8
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.9e-17 92.4 171 40.9
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 3.9e-17 92.4 162 38.3
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 8.7e-17 91.3 180 41.7
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 1.5e-16 90.5 171 39.8
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 1.5e-16 90.5 154 38.3
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.9e-16 90.1 171 39.8
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.5e-16 89.7 168 37.5
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 4.3e-16 89.0 163 42.9
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 7.4e-16 88.2 159 37.7
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 7.4e-16 88.2 160 41.2
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 9.6e-16 87.8 187 35.3
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 9.6e-16 87.8 137 40.1
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 1.6e-15 87.0 179 36.3
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 2.1e-15 86.7 161 41.0
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 2.8e-15 86.3 161 39.1
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 4.8e-15 85.5 163 41.7
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 4.8e-15 85.5 139 41.0
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 8.2e-15 84.7 178 36.5
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 1.4e-14 84.0 159 37.1
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 1.8e-14 83.6 186 34.4
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 4.0e-14 82.4 186 34.4
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 6.9e-14 81.6 186 33.9
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 6.9e-14 81.6 178 35.4
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 9.0e-14 81.3 165 38.8
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 9.0e-14 81.3 165 38.8
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 9.0e-14 81.3 190 36.8
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 1.2e-13 80.9 170 35.3
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 2.0e-13 80.1 127 40.2
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 2.0e-13 80.1 162 37.7
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 2.6e-13 79.7 218 30.7
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 3.4e-13 79.3 173 37.6
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 5.8e-13 78.6 161 36.0
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 5.8e-13 78.6 161 36.0
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 2.9e-12 76.3 111 43.2
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 6.5e-12 75.1 166 36.7
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 1.1e-11 74.3 141 38.3
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 1.1e-11 74.3 157 34.4
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 1.4e-11 73.9 175 33.1
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.4e-11 73.9 155 37.4
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 4.2e-11 72.4 216 29.6
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 5.5e-11 72.0 156 37.8
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 7.1e-11 71.6 188 31.4
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 1.2e-10 70.9 158 36.7
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 3.0e-09 66.2 164 34.1
Lj7P307T15 Lonicera japonica HOM05D007182 ORTHO05D008919 2.5e-08 63.2 70 51.4
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 9.7e-08 61.2 174 32.8
MBI06_g01043_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 2.2e-07 60.1 126 34.9
DCAR_031230 Daucus carota HOM05D007182 ORTHO05D008919 3.7e-07 59.3 159 33.3
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 2.4e-06 56.6 144 34.7
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 3.1e-06 56.2 135 37.0
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 5.3e-06 55.5 208 29.8


User provided reference genes

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