Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009762g0030 Nicotiana tabacum HOM05D014572 ORTHO05D016880 5.8e-176 620.9 347 100.0
Nitab4.5_0003322g0040 Nicotiana tabacum HOM05D014572 ORTHO05D016880 1.3e-146 523.5 359 85.2
Peaxi162Scf00261g01114 Petunia axillaris HOM05D014572 ORTHO05D016880 1.0e-95 354.4 331 63.4
CAN.G370.64 Capsicum annuum HOM05D014572 ORTHO05D016880 5.6e-94 348.6 367 58.9
PGSC0003DMG400010210 Solanum tuberosum HOM05D014572 ORTHO05D016880 1.6e-93 347.1 360 60.0
Sopen02g021870 Solanum pennellii HOM05D014572 ORTHO05D016880 4.3e-86 322.4 360 57.2
Solyc02g076940.2 Solanum lycopersicum HOM05D014572 ORTHO05D016880 7.1e-81 305.1 360 55.6
CAN.G141.10 Capsicum annuum HOM05D014572 ORTHO05D016880 3.2e-25 120.2 161 47.2
CAN.G238.3 Capsicum annuum HOM05D014572 ORTHO05D016880 1.3e-13 81.6 82 59.8
Dinv40663 Davidia involucrata HOM05D014353 ORTHO05D002944 1.7e-13 81.3 265 28.3
Dinv04617 Davidia involucrata HOM05D000845 ORTHO05D003813 8.2e-13 79.0 181 32.0
Duzib235G1377 Durio zibethinus HOM05D004563 ORTHO05D002944 2.2e-10 70.9 75 49.3
Thecc.06G172300 Theobroma cacao HOM05D004563 ORTHO05D002944 3.8e-10 70.1 349 24.4
CSS0011548 Camellia sinensis var. sinensis HOM05D014353 ORTHO05D002944 5.0e-10 69.7 397 25.7
Cc02_g14720 Coffea canephora HOM05D014572 ORTHO05D016880 6.5e-10 69.3 355 25.6
Gohir.D06G136800 Gossypium hirsutum HOM05D004563 ORTHO05D002944 6.5e-10 69.3 80 46.2
Gorai.010G159000 Gossypium raimondii HOM05D004563 ORTHO05D002944 6.5e-10 69.3 80 46.2
TAR624G1329 Trochodendron aralioides HOM05D004563 ORTHO05D002944 6.5e-10 69.3 80 42.5
CSS0028772 Camellia sinensis var. sinensis HOM05D014353 ORTHO05D002944 5.5e-09 66.2 148 31.1
Gohir.A10G031400 Gossypium hirsutum HOM05D004563 ORTHO05D002944 1.2e-08 65.1 348 23.0
TAR626G0367 Trochodendron aralioides HOM05D004563 ORTHO05D002944 1.2e-08 65.1 80 42.5
Actinidia16803 Actinidia chinensis HOM05D014353 ORTHO05D002944 2.7e-08 63.9 410 25.1
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 6.1e-08 62.8 74 39.2
SEGI_01253 Sequoiadendron giganteum HOM05D025414 ORTHO05D002944 6.1e-08 62.8 89 36.0
Rhsim13G0191200 Rhododendron simsii HOM05D014353 ORTHO05D002944 8.0e-08 62.4 395 25.6
Gohir.D10G032200 Gossypium hirsutum HOM05D004563 ORTHO05D002944 1.4e-07 61.6 70 47.1
Sabra04G0036000 Salix brachista HOM05D023908 ORTHO05D002944 1.4e-07 61.6 347 24.5
GSVIVG01014227001 Vitis vinifera HOM05D008023 ORTHO05D002944 1.4e-07 61.6 80 40.0
HanXRQChr17g0557991 Helianthus annuus HOM05D004563 ORTHO05D002944 4.0e-07 60.1 87 40.2
Gorai.011G033900 Gossypium raimondii HOM05D004563 ORTHO05D002944 8.8e-07 58.9 349 22.1
Lsat_1_v5_gn_8_140081 Lactuca sativa HOM05D004563 ORTHO05D002944 8.8e-07 58.9 72 40.3
CSS0022203 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 1.1e-06 58.5 80 36.2
Oeu032703.1 Olea europaea HOM05D004563 ORTHO05D002944 1.1e-06 58.5 90 38.9
Thecc.07G105200 Theobroma cacao HOM05D008023 ORTHO05D002944 1.1e-06 58.5 61 47.5
CSS0035750 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 1.5e-06 58.2 80 36.2
CSS0041377 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 1.5e-06 58.2 80 36.2
TWI39G0037 Tripterygium wilfordii HOM05D008023 ORTHO05D002944 2.6e-06 57.4 91 34.1
CSS0038794 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 4.4e-06 56.6 80 35.0
CiPaw.12G114700 Carya illinoinensis HOM05D008023 ORTHO05D002944 4.4e-06 56.6 70 37.1
Atru.chr6.2814 Acer truncatum HOM05D004563 ORTHO05D002944 9.7e-06 55.5 76 40.8
Nn1g09097 Nelumbo nucifera HOM05D004563 ORTHO05D002944 9.7e-06 55.5 94 30.9
Potri.004G055300 Populus trichocarpa HOM05D023908 ORTHO05D002944 9.7e-06 55.5 349 24.9


User provided reference genes

Program Settings