Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009741g0040 Nicotiana tabacum HOM05D007204 ORTHO05D008593 1.4e-162 576.2 299 100.0
Nitab4.5_0007880g0040 Nicotiana tabacum HOM05D007204 ORTHO05D008593 7.1e-106 387.9 298 74.5
Peaxi162Scf00390g00079 Petunia axillaris HOM05D007204 ORTHO05D008593 1.9e-90 336.7 296 66.9
PGSC0003DMG400030457 Solanum tuberosum HOM05D007204 ORTHO05D008593 4.2e-82 308.9 292 63.0
Actinidia32616 Actinidia chinensis HOM05D007204 ORTHO05D008593 2.2e-54 216.9 299 44.5
Dinv09663 Davidia involucrata HOM05D007204 ORTHO05D008593 6.6e-51 205.3 295 44.7
Cc01_g14730 Coffea canephora HOM05D007204 ORTHO05D008593 3.3e-50 203.0 296 44.9
Solyc06g082320.4 Solanum lycopersicum HOM05D007204 ORTHO05D008593 9.5e-50 201.4 157 70.7
Rhsim13G0065200 Rhododendron simsii HOM05D007204 ORTHO05D008593 4.0e-48 196.1 328 43.0
Potri.001G281500 Populus trichocarpa HOM05D007204 ORTHO05D008593 8.3e-46 188.3 294 43.5
GSVIVG01024663001 Vitis vinifera HOM05D007204 ORTHO05D008593 2.4e-45 186.8 294 42.5
Migut.N00766 Erythranthe guttata HOM05D007204 ORTHO05D008593 1.2e-44 184.5 295 41.4
MSTRG.9779 Avicennia marina HOM05D007204 ORTHO05D008593 9.5e-42 174.9 287 39.4
Lsat_1_v5_gn_9_18401 Lactuca sativa HOM05D007204 ORTHO05D008593 1.6e-41 174.1 295 38.0
SGA_v2.0_scaffold146G36125 Striga asiatica HOM05D007204 ORTHO05D008593 1.6e-41 174.1 293 40.6
Hma1.2p1_0841F.1_g226930 Hydrangea macrophylla HOM05D007204 ORTHO05D008593 3.6e-41 172.9 206 50.5
CiPaw.14G055100 Carya illinoinensis HOM05D007204 ORTHO05D008593 4.7e-41 172.6 296 39.5
Sopen06g033710 Solanum pennellii HOM05D007204 ORTHO05D008593 4.7e-41 172.6 172 59.3
HanXRQChr08g0229231 Helianthus annuus HOM05D007204 ORTHO05D008593 4.0e-40 169.5 295 38.0
PGR102G0940 Punica granatum HOM05D007204 ORTHO05D008593 8.9e-40 168.3 296 37.5
Atru.chr3.4133 Acer truncatum HOM05D007204 ORTHO05D008593 2.0e-39 167.2 297 40.4
QL01p040026 Quercus lobata HOM05D007204 ORTHO05D008593 5.8e-39 165.6 292 41.1
Prupe.6G050500 Prunus persica HOM05D007204 ORTHO05D008593 2.2e-38 163.7 309 36.6
DCAR_012274 Daucus carota HOM05D007204 ORTHO05D008593 2.9e-38 163.3 224 46.4
Nn2g10986 Nelumbo nucifera HOM05D007204 ORTHO05D008593 3.7e-38 162.9 299 38.1
TWI31G1133 Tripterygium wilfordii HOM05D007204 ORTHO05D008593 1.9e-37 160.6 299 38.5
Thecc.09G355900 Theobroma cacao HOM05D007204 ORTHO05D008593 2.4e-37 160.2 289 37.4
Duzib168G0028 Durio zibethinus HOM05D007204 ORTHO05D008593 3.2e-37 159.8 293 36.9
Oeu034090.2 Olea europaea HOM05D007204 ORTHO05D008593 1.6e-36 157.5 296 40.9
Gohir.D03G142400 Gossypium hirsutum HOM05D007204 ORTHO05D008593 2.7e-36 156.8 290 37.9
PSO339G1295 Papaver somniferum HOM05D007204 ORTHO05D008593 2.7e-36 156.8 297 38.7
Cfa011760 Carpinus fangiana HOM05D007204 ORTHO05D008593 3.5e-36 156.4 224 45.5
Gorai.003G149500 Gossypium raimondii HOM05D007204 ORTHO05D008593 1.3e-35 154.5 290 37.6
RcHm_v2.0_Chr5g0071301 Rosa chinensis HOM05D007204 ORTHO05D008593 1.3e-35 154.5 296 37.8
COL.COLO4_11129 Corchorus olitorius HOM05D007204 ORTHO05D008593 1.7e-35 154.1 287 36.6
Psat5g153840 Pisum sativum HOM05D007204 ORTHO05D008593 1.1e-34 151.4 300 37.7
Sed0020276 Sechium edule HOM05D007204 ORTHO05D008593 1.1e-34 151.4 291 36.8
TPR.G32886 Trifolium pratense HOM05D007204 ORTHO05D008593 2.5e-34 150.2 300 37.3
arahy.Tifrunner.gnm1.ann1.QCA2Y7 Arachis hypogaea HOM05D007204 ORTHO05D008593 5.6e-34 149.1 297 37.4
FAN16G2350 Fragaria x ananassa HOM05D007204 ORTHO05D008593 7.3e-34 148.7 300 36.3
FAN25G1877 Fragaria x ananassa HOM05D007204 ORTHO05D008593 1.6e-33 147.5 300 36.7
Aqoxy2G00798 Aquilegia oxysepala HOM05D007204 ORTHO05D008593 2.1e-33 147.1 222 43.2
AUR62001886 Chenopodium quinoa HOM05D007204 ORTHO05D008593 2.8e-33 146.7 305 36.7
Sc21g0005220 Simmondsia chinensis HOM05D007204 ORTHO05D008593 8.0e-33 145.2 284 36.3
arahy.Tifrunner.gnm1.ann1.IVNQ32 Arachis hypogaea HOM05D007204 ORTHO05D008593 1.4e-32 144.4 303 36.6
Phvul.006G073000 Phaseolus vulgaris HOM05D007204 ORTHO05D008593 2.3e-32 143.7 297 36.0
MD11G1063300 Malus domestica HOM05D007204 ORTHO05D008593 4.0e-32 142.9 304 35.9
Gohir.A03G026100 Gossypium hirsutum HOM05D007204 ORTHO05D008593 5.2e-32 142.5 221 41.6
FvH4_3g39530 Fragaria vesca HOM05D007204 ORTHO05D008593 6.8e-32 142.1 300 35.0
PSO801G0770 Papaver somniferum HOM05D007204 ORTHO05D008593 1.2e-31 141.4 297 36.7
Manes.17G034600 Manihot esculenta HOM05D007204 ORTHO05D008593 1.5e-31 141.0 280 36.8
ECA247G3086 Erigeron canadensis HOM05D007204 ORTHO05D008593 2.6e-31 140.2 381 29.9
TAR623G0341 Trochodendron aralioides HOM05D007204 ORTHO05D008593 3.4e-31 139.8 248 39.1
VMungo0540G1924 Vigna mungo HOM05D007204 ORTHO05D008593 4.4e-31 139.4 277 36.8
AUR62009682 Chenopodium quinoa HOM05D007204 ORTHO05D008593 5.8e-31 139.0 285 36.1
CsaV3_1G015330 Cucumis sativus L. HOM05D007204 ORTHO05D008593 5.8e-31 139.0 288 37.5
MELO3C026086.2 Cucumis melo HOM05D007204 ORTHO05D008593 9.8e-31 138.3 287 37.3
SGA_v2.0_scaffold120G32948 Striga asiatica HOM05D007204 ORTHO05D008593 4.9e-30 136.0 350 32.0
CANSAT54G2573 Cannabis sativa HOM05D007204 ORTHO05D008593 8.3e-30 135.2 259 38.2
ClCG03G000270 Citrullus lanatus HOM05D007204 ORTHO05D008593 8.3e-30 135.2 297 37.0
MBI03_g33621_MAGBIO Magnolia biondii HOM05D007204 ORTHO05D008593 8.3e-30 135.2 332 33.1
THA.LOC104800761 Tarenaya hassleriana HOM05D007204 ORTHO05D008593 8.3e-30 135.2 290 32.8
Lj2A1091T48 Lonicera japonica HOM05D007204 ORTHO05D008593 1.1e-29 134.8 138 53.6
Carub.0001s0635 Capsella rubella HOM05D007204 ORTHO05D008593 1.4e-29 134.4 287 33.1
BcaC05g24670 Brassica carinata HOM05D007204 ORTHO05D008593 1.9e-29 134.0 296 33.4
CARHR006750 Cardamine hirsuta HOM05D007204 ORTHO05D008593 1.9e-29 134.0 297 33.0
BraA10t42821Z Brassica rapa HOM05D007204 ORTHO05D008593 4.1e-29 132.9 295 33.6
BolC5t29286H Brassica oleracea HOM05D007204 ORTHO05D008593 5.4e-29 132.5 301 33.6
FAN21G2638 Fragaria x ananassa HOM05D007204 ORTHO05D008593 5.4e-29 132.5 212 41.5
C05p05140 Brassica napus HOM05D007204 ORTHO05D008593 9.2e-29 131.7 296 33.1
BcaNung06763 Brassica carinata HOM05D007204 ORTHO05D008593 1.2e-28 131.3 298 33.2
BcaNung06767 Brassica carinata HOM05D007204 ORTHO05D008593 1.6e-28 131.0 296 32.4
Ciclev10029273m.g Citrus clementina HOM05D007204 ORTHO05D008593 1.6e-28 131.0 255 36.9
Lj6g0005890 Lotus japonicus HOM05D007204 ORTHO05D008593 1.6e-28 131.0 295 34.2
Medtr3g031680 Medicago truncatula HOM05D007204 ORTHO05D008593 1.6e-28 131.0 225 38.7
HPP92_019711 Vanilla planifolia HOM05D000883 ORTHO05D002942 2.1e-28 130.6 289 31.1
A10p05600 Brassica napus HOM05D007204 ORTHO05D008593 4.6e-28 129.4 290 33.1
vmacro02927 Vaccinium macrocarpon HOM05D007204 ORTHO05D008593 4.6e-28 129.4 225 40.4
AL1G17180 Arabidopsis lyrata HOM05D007204 ORTHO05D008593 1.0e-27 128.3 297 32.0
Medtr3g031720 Medicago truncatula HOM05D007204 ORTHO05D008593 1.7e-27 127.5 235 37.0
AT1G07060 Arabidopsis thaliana HOM05D007204 ORTHO05D008593 6.6e-27 125.6 296 32.1
SalBow2G2431 Salvia bowleyana HOM05D007204 ORTHO05D008593 8.6e-27 125.2 222 40.1
Sabra16G0175100 Salix brachista HOM05D007204 ORTHO05D008593 5.6e-26 122.5 290 34.1
Aa31LG1G8110 Aethionema arabicum HOM05D007204 ORTHO05D008593 9.5e-26 121.7 298 31.9
Glyma.18G058101 Glycine max HOM05D007204 ORTHO05D008593 1.2e-25 121.3 157 43.3
unitig_94.g28350 Utricularia gibba HOM05D007204 ORTHO05D008593 2.1e-25 120.6 274 32.8
FAN11G3207 Fragaria x ananassa HOM05D007204 ORTHO05D008593 6.2e-25 119.0 264 34.1
Eucgr.B03990 Eucalyptus grandis HOM05D007204 ORTHO05D008593 1.4e-24 117.9 295 32.2
Sp1g05780 Schrenkiella parvula HOM05D007204 ORTHO05D008593 1.4e-24 117.9 292 31.8
CSS0017241 Camellia sinensis var. sinensis HOM05D007204 ORTHO05D008593 5.2e-24 115.9 162 43.8
CSS0041349 Camellia sinensis var. sinensis HOM05D007204 ORTHO05D008593 1.5e-23 114.4 162 43.2
Thhalv10009490m.g Eutrema salsugineum HOM05D007204 ORTHO05D008593 2.0e-23 114.0 219 34.7
Lalb_Chr15g0083171 Lupinus albus HOM05D007204 ORTHO05D008593 2.1e-20 104.0 156 41.0
Hund18956 Selenicereus undatus HOM05D007204 ORTHO05D008593 2.7e-20 103.6 221 32.6
BcaC05g24674 Brassica carinata HOM05D007204 ORTHO05D008593 7.8e-20 102.1 249 31.7
Zm00001eb195020 Zea mays HOM05D007204 ORTHO05D008593 2.1e-17 94.0 289 29.1
ATR0174G030 Amborella trichopoda HOM05D007204 ORTHO05D008593 8.1e-17 92.0 222 33.3
Os11g0106800 Oryza sativa ssp. japonica HOM05D007204 ORTHO05D008593 4.9e-14 82.8 283 28.3
Os12g0106100 Oryza sativa ssp. japonica HOM05D007204 ORTHO05D008593 3.2e-13 80.1 277 27.4
Dinv28687 Davidia involucrata HOM05D007204 ORTHO05D008593 2.9e-06 57.0 48 60.4


User provided reference genes

Program Settings