Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 5.2e-60 234.2 118 100.0
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 8.9e-44 180.3 91 96.7
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 1.1e-36 156.8 91 85.7
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 1.2e-35 153.3 91 83.5
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 2.1e-32 142.5 91 79.1
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 2.1e-29 132.5 92 72.8
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 8.1e-29 130.6 92 71.7
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 6.9e-28 127.5 93 69.9
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 3.4e-27 125.2 94 67.0
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 7.6e-27 124.0 92 70.7
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 3.8e-26 121.7 91 68.1
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 1.4e-25 119.8 91 64.8
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 3.5e-24 115.2 91 61.5
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 1.7e-23 112.8 91 63.7
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 2.3e-23 112.5 91 61.5
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 3.9e-23 111.7 91 60.4
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 5.1e-23 111.3 91 59.3
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 6.6e-23 110.9 91 60.4
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 6.6e-23 110.9 91 59.3
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 6.6e-23 110.9 91 59.3
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 8.7e-23 110.5 91 57.1
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 1.1e-22 110.2 91 58.2
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 1.1e-22 110.2 91 59.3
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 1.5e-22 109.8 91 60.4
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 1.9e-22 109.4 91 60.4
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 5.6e-22 107.8 91 58.2
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 5.6e-22 107.8 91 57.1
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 5.6e-22 107.8 91 58.2
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 5.6e-22 107.8 91 60.4
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 7.3e-22 107.5 91 57.1
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 7.3e-22 107.5 91 57.1
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 7.3e-22 107.5 91 57.1
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 7.3e-22 107.5 91 58.2
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 1.3e-21 106.7 91 58.2
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 1.6e-21 106.3 91 60.4
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 2.1e-21 105.9 92 59.8
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 2.8e-21 105.5 91 59.3
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 6.2e-21 104.4 91 58.2
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.4e-20 103.2 92 58.7
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 1.8e-20 102.8 91 57.1
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 3.1e-20 102.1 92 58.7
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 3.1e-20 102.1 92 59.8
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 3.1e-20 102.1 91 59.3
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 4.0e-20 101.7 84 61.9
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 5.3e-20 101.3 91 57.1
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 6.9e-20 100.9 92 57.6
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 9.0e-20 100.5 92 57.6
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.2e-19 100.1 92 58.7
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 1.2e-19 100.1 91 56.0
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 1.2e-19 100.1 91 56.0
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 1.2e-19 100.1 91 56.0
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.5e-19 99.8 92 57.6
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 1.5e-19 99.8 91 62.6
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 2.0e-19 99.4 92 60.9
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 2.0e-19 99.4 91 60.4
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 2.0e-19 99.4 92 58.7
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 2.0e-19 99.4 92 58.7
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 2.6e-19 99.0 91 61.5
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 3.4e-19 98.6 91 57.1
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 5.8e-19 97.8 91 57.1
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 7.6e-19 97.4 93 53.8
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 7.6e-19 97.4 92 56.5
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 1.3e-18 96.7 91 59.3
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 1.7e-18 96.3 91 61.5
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 1.7e-18 96.3 91 59.3
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 2.2e-18 95.9 92 53.3
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 2.2e-18 95.9 92 53.3
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 2.9e-18 95.5 91 59.3
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 2.9e-18 95.5 91 59.3
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 2.9e-18 95.5 91 58.2
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 2.9e-18 95.5 91 58.2
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 2.9e-18 95.5 91 58.2
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 2.9e-18 95.5 91 58.2
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 2.9e-18 95.5 91 58.2
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 2.9e-18 95.5 91 58.2
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 4.9e-18 94.7 91 56.0
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 6.4e-18 94.4 91 56.0
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 8.4e-18 94.0 91 58.2
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 1.1e-17 93.6 92 53.3
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 1.1e-17 93.6 91 54.9
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 1.4e-17 93.2 91 53.8
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 1.9e-17 92.8 91 54.9
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 1.9e-17 92.8 91 53.8
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 2.4e-17 92.4 91 54.9
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 2.4e-17 92.4 91 54.9
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 3.2e-17 92.0 91 54.9
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 9.3e-17 90.5 92 54.3
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 2.7e-16 89.0 91 52.7
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 4.6e-16 88.2 94 48.9
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 6.0e-16 87.8 91 50.5
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 6.0e-16 87.8 91 52.7
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 7.9e-16 87.4 91 51.6
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 1.0e-15 87.0 91 51.6
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 2.3e-15 85.9 91 53.8
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 3.0e-15 85.5 91 53.8
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 3.0e-15 85.5 91 51.6
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 3.9e-15 85.1 91 50.5
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 3.9e-15 85.1 91 53.8
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 5.6e-14 81.3 92 50.0
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 9.6e-14 80.5 91 52.7
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 9.6e-14 80.5 91 49.5
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 8.1e-13 77.4 91 51.6
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 1.7e-10 69.7 118 39.0
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 8.4e-10 67.4 92 43.5
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 8.4e-10 67.4 95 45.3
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 3.2e-09 65.5 92 42.4
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 2.7e-08 62.4 93 43.0
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.9e-06 56.2 91 39.6
FAN09G2993 Fragaria x ananassa HOM05D006332 ORTHO05D210550 4.3e-06 55.1 62 48.4
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 9.6e-06 53.9 91 36.3


User provided reference genes

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