Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 5.0e-210 734.2 367 100.0
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.0e-186 656.8 365 92.1
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 3.1e-167 592.0 341 87.7
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 1.6e-163 579.7 361 83.7
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 2.0e-163 579.3 361 83.4
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 2.3e-146 522.7 354 77.1
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 5.6e-145 518.1 362 73.2
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 1.5e-142 510.0 363 72.2
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 2.9e-141 505.8 361 73.1
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 9.3e-140 500.7 355 73.0
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 7.8e-139 497.7 356 72.2
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 1.3e-138 496.9 360 72.5
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.1e-137 493.8 360 71.1
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 4.3e-137 491.9 360 69.2
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 4.8e-136 488.4 360 69.4
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 1.1e-135 487.3 354 71.5
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 2.0e-134 483.0 354 70.1
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 2.0e-134 483.0 360 69.4
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 5.8e-134 481.5 359 69.6
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 2.2e-133 479.6 359 68.2
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 4.9e-133 478.4 359 69.4
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 6.4e-133 478.0 359 68.8
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 1.4e-132 476.9 359 68.8
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 1.9e-132 476.5 356 70.2
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.2e-132 475.3 360 67.8
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 5.4e-132 474.9 361 70.1
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 5.4e-132 474.9 366 67.2
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 6.0e-131 471.5 359 66.9
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 3.0e-130 469.2 359 67.4
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 3.0e-130 469.2 359 68.0
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 5.1e-130 468.4 360 66.9
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 5.1e-130 468.4 359 68.5
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 6.7e-130 468.0 359 67.4
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 6.7e-130 468.0 359 67.7
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 1.1e-129 467.2 356 68.5
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 2.5e-129 466.1 359 67.7
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 3.3e-129 465.7 358 68.2
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 7.4e-129 464.5 358 66.5
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 2.1e-128 463.0 349 67.6
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 2.8e-128 462.6 367 64.6
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 3.7e-128 462.2 360 66.4
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 4.8e-128 461.8 359 66.9
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 6.2e-128 461.5 359 67.1
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.1e-127 460.7 340 69.4
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 1.1e-127 460.7 347 68.9
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 2.4e-127 459.5 356 66.0
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 2.4e-127 459.5 360 67.5
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 4.0e-127 458.8 351 68.1
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 4.0e-127 458.8 358 67.6
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 5.3e-127 458.4 367 65.1
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 5.3e-127 458.4 359 66.3
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 5.3e-127 458.4 361 65.9
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 9.0e-127 457.6 355 67.0
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 1.2e-126 457.2 362 66.9
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 2.6e-126 456.1 361 65.4
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 2.6e-126 456.1 359 65.7
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 3.4e-126 455.7 355 64.8
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 4.5e-126 455.3 359 66.0
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 5.8e-126 454.9 382 63.9
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 5.8e-126 454.9 359 66.3
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.3e-125 453.8 355 66.5
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 1.7e-125 453.4 360 66.9
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 2.2e-125 453.0 359 64.9
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 2.9e-125 452.6 359 65.5
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 3.8e-125 452.2 355 66.2
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 6.4e-125 451.4 359 64.9
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 8.4e-125 451.1 360 65.8
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 2.4e-124 449.5 359 64.9
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 5.5e-124 448.4 355 64.5
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 9.3e-124 447.6 359 64.1
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 1.2e-123 447.2 360 64.2
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 2.7e-123 446.0 360 65.3
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 7.9e-123 444.5 360 63.3
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 1.0e-122 444.1 360 64.4
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.3e-122 443.7 335 69.0
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 2.3e-122 443.0 360 64.7
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 3.0e-122 442.6 361 64.5
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 3.9e-122 442.2 360 64.7
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 2.5e-121 439.5 360 62.8
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 2.1e-120 436.4 355 64.5
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 2.1e-120 436.4 374 63.1
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 4.8e-120 435.3 355 64.8
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 4.8e-120 435.3 355 65.1
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 4.8e-120 435.3 355 65.1
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 4.8e-120 435.3 355 64.8
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 4.8e-120 435.3 360 62.5
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 1.1e-119 434.1 361 60.4
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 1.8e-119 433.3 358 63.4
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 5.3e-119 431.8 361 61.8
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.2e-118 430.6 355 62.8
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 1.0e-117 427.6 402 60.2
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 3.8e-117 425.6 361 60.7
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 1.9e-116 423.3 354 63.0
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 6.0e-115 418.3 305 71.1
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 3.0e-114 416.0 371 61.2
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 7.4e-113 411.4 292 70.9
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 4.8e-112 408.7 307 68.1
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 2.4e-111 406.4 340 62.4
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 4.1e-111 405.6 353 62.3
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 8.5e-109 397.9 269 75.1
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 8.5e-109 397.9 327 62.7
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 2.5e-108 396.4 340 63.2
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 5.5e-108 395.2 331 67.4
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 9.7e-105 384.4 267 72.3
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 2.3e-98 363.2 347 58.8
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 5.7e-97 358.6 361 55.7
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 3.1e-95 352.8 345 55.1
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 5.0e-93 345.5 360 51.1
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 7.9e-91 338.2 232 76.3
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 8.8e-90 334.7 363 49.6
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.5e-89 334.0 357 49.3
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 4.4e-89 332.4 362 46.7
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 4.7e-83 312.4 308 52.3
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 6.8e-74 282.0 203 71.4
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 7.0e-63 245.4 375 39.7
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 2.9e-56 223.4 131 83.2
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.9e-47 194.1 109 86.2
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-42 177.2 184 53.8
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.7e-40 169.9 159 56.0
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 1.4e-39 167.9 312 36.2
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 5.2e-26 122.9 120 55.0
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 6.4e-24 115.9 116 53.4
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 2.9e-16 90.5 58 69.0
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 4.6e-14 83.2 111 39.6
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 7.4e-12 75.9 97 39.2
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 1.6e-11 74.7 127 38.6
Cpa.g.sc777.3 Carica papaya HOM05D006332 ORTHO05D034078 1.6e-06 58.2 54 57.4
TPR.G32042 Trifolium pratense HOM05D006332 ORTHO05D034078 6.0e-06 56.2 37 67.6


User provided reference genes

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